RNA–Protein interactions for RNA: ENST00000374949.2

HLA-DQA1-202, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,060 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-202ENST00000374949 SLFN12Q8IYM2 578 aa12.23□□□□□ -0.45
HLA-DQA1-202ENST00000374949 APBB2Q92870 758 aa12.23□□□□□ -0.45
HLA-DQA1-202ENST00000374949 EPSTI1Q96J88 318 aa12.23□□□□□ -0.45
HLA-DQA1-202ENST00000374949 INPP4AQ96PE3 977 aaPredicted RBP12.23□□□□□ -0.45
HLA-DQA1-202ENST00000374949 PYM1Q9BRP8 204 aaKnown RBP12.23□□□□□ -0.45
HLA-DQA1-202ENST00000374949 PANK2Q9BZ23 570 aa12.23□□□□□ -0.45
HLA-DQA1-202ENST00000374949 RAB34Q9BZG1 259 aa12.23□□□□□ -0.45
HLA-DQA1-202ENST00000374949 ZNF215Q9UL58 517 aaPredicted RBP12.23□□□□□ -0.45
HLA-DQA1-202ENST00000374949 SYCE3A1L190 88 aa12.22□□□□□ -0.45
HLA-DQA1-202ENST00000374949 SPATA31C2B4DYI2 1134 aa12.22□□□□□ -0.45
HLA-DQA1-202ENST00000374949 FAM86B1E9PN63 330 aa12.22□□□□□ -0.45
HLA-DQA1-202ENST00000374949 GRM6O15303 877 aa12.22□□□□□ -0.45
HLA-DQA1-202ENST00000374949 POLR2DO15514 142 aaKnown RBP12.22□□□□□ -0.45
HLA-DQA1-202ENST00000374949 FAM86B2P0C5J1 330 aa12.22□□□□□ -0.45
HLA-DQA1-202ENST00000374949 LINC00271P0C7V0 271 aa12.22□□□□□ -0.45
HLA-DQA1-202ENST00000374949 GNAT1P11488 350 aa12.22□□□□□ -0.45
HLA-DQA1-202ENST00000374949 ICAM3P32942 547 aa12.22□□□□□ -0.45
HLA-DQA1-202ENST00000374949 LTBRP36941 435 aa12.22□□□□□ -0.45
HLA-DQA1-202ENST00000374949 UBA7P41226 1012 aa12.22□□□□□ -0.45
HLA-DQA1-202ENST00000374949 FXR2P51116 673 aaKnown RBP eCLIP12.22□□□□□ -0.45
HLA-DQA1-202ENST00000374949 NEDD9Q14511 834 aa12.22□□□□□ -0.45
HLA-DQA1-202ENST00000374949 PRR16Q569H4 304 aa12.22□□□□□ -0.45
HLA-DQA1-202ENST00000374949 FAM26DQ5JW98 314 aa12.22□□□□□ -0.45
HLA-DQA1-202ENST00000374949 KANK3Q6NY19 840 aa12.22□□□□□ -0.45
HLA-DQA1-202ENST00000374949 XRRA1Q6P2D8 792 aa12.22□□□□□ -0.45
HLA-DQA1-202ENST00000374949 LRSAM1Q6UWE0 723 aa12.22□□□□□ -0.45
HLA-DQA1-202ENST00000374949 USP49Q70CQ1 688 aa12.22□□□□□ -0.45
HLA-DQA1-202ENST00000374949 ELOA2Q8IYF1 753 aaPredicted RBP12.22□□□□□ -0.45
HLA-DQA1-202ENST00000374949 FIBCD1Q8N539 461 aa12.22□□□□□ -0.45
HLA-DQA1-202ENST00000374949 HAS1Q92839 578 aa12.22□□□□□ -0.45
HLA-DQA1-202ENST00000374949 FAM20AQ96MK3 541 aa12.22□□□□□ -0.45
HLA-DQA1-202ENST00000374949 KCNMB3Q9NPA1 279 aa12.22□□□□□ -0.45
HLA-DQA1-202ENST00000374949 LRWD1Q9UFC0 647 aa12.22□□□□□ -0.45
HLA-DQA1-202ENST00000374949 CCDC39Q9UFE4 941 aa12.22□□□□□ -0.45
HLA-DQA1-202ENST00000374949 USP25Q9UHP3 1055 aa12.22□□□□□ -0.45
HLA-DQA1-202ENST00000374949 PCDHA12Q9UN75 941 aa12.22□□□□□ -0.45
HLA-DQA1-202ENST00000374949 FAM50BQ9Y247 325 aa12.22□□□□□ -0.45
HLA-DQA1-202ENST00000374949 C19orf67A6NJJ6 358 aa12.21□□□□□ -0.45
HLA-DQA1-202ENST00000374949 MEIS1O00470 390 aa12.21□□□□□ -0.45
HLA-DQA1-202ENST00000374949 TBX10O75333 385 aa12.21□□□□□ -0.45
HLA-DQA1-202ENST00000374949 CHRNA1P02708 482 aa12.21□□□□□ -0.45
HLA-DQA1-202ENST00000374949 GTF2F1P35269 517 aaKnown RBP eCLIP12.21□□□□□ -0.45
HLA-DQA1-202ENST00000374949 ADAM17P78536 824 aa12.21□□□□□ -0.45
HLA-DQA1-202ENST00000374949 DLX2Q07687 328 aaPredicted RBP12.21□□□□□ -0.45
HLA-DQA1-202ENST00000374949 HYAL1Q12794 435 aa12.21□□□□□ -0.45
HLA-DQA1-202ENST00000374949 LPIN1Q14693 890 aa12.21□□□□□ -0.45
HLA-DQA1-202ENST00000374949 LONRF3Q496Y0 759 aa12.21□□□□□ -0.45
HLA-DQA1-202ENST00000374949 CEP55Q53EZ4 464 aa12.21□□□□□ -0.45
HLA-DQA1-202ENST00000374949 PCNX4Q63HM2 1172 aa12.21□□□□□ -0.45
HLA-DQA1-202ENST00000374949 KRBA2Q6ZNG9 492 aa12.21□□□□□ -0.45
HLA-DQA1-202ENST00000374949 RBM43Q6ZSC3 357 aaKnown RBP12.21□□□□□ -0.45
HLA-DQA1-202ENST00000374949 NIPA1Q7RTP0 329 aa12.21□□□□□ -0.45
HLA-DQA1-202ENST00000374949 PLA2G4DQ86XP0 818 aa12.21□□□□□ -0.45
HLA-DQA1-202ENST00000374949 ADHFE1Q8IWW8 467 aa12.21□□□□□ -0.45
HLA-DQA1-202ENST00000374949 IGSF22Q8N9C0 903 aa12.21□□□□□ -0.45
HLA-DQA1-202ENST00000374949 IQUBQ8NA54 791 aa12.21□□□□□ -0.45
HLA-DQA1-202ENST00000374949 CNNM3Q8NE01 707 aa12.21□□□□□ -0.45
HLA-DQA1-202ENST00000374949 CCDC34Q96HJ3 373 aa12.21□□□□□ -0.45
HLA-DQA1-202ENST00000374949 MXRA8Q9BRK3 442 aa12.21□□□□□ -0.45
HLA-DQA1-202ENST00000374949 C11orf84Q9BUA3 381 aaPredicted RBP12.21□□□□□ -0.45
HLA-DQA1-202ENST00000374949 CCSER1Q9C0I3 900 aa12.21□□□□□ -0.45
HLA-DQA1-202ENST00000374949 TTC12Q9H892 705 aaPredicted RBP12.21□□□□□ -0.45
HLA-DQA1-202ENST00000374949 RC3H2Q9HBD1 1191 aaKnown RBP12.21□□□□□ -0.45
HLA-DQA1-202ENST00000374949 PRKAG3Q9UGI9 489 aa12.21□□□□□ -0.45
HLA-DQA1-202ENST00000374949 HOOK1Q9UJC3 728 aaKnown RBP12.21□□□□□ -0.45
HLA-DQA1-202ENST00000374949 TTC3P53804 2025 aa12.21□□□□□ -0.46
HLA-DQA1-202ENST00000374949 TECTAO75443 2155 aa12.2□□□□□ -0.46
HLA-DQA1-202ENST00000374949 LOXHD1Q8IVV2 1947 aa12.2□□□□□ -0.46
HLA-DQA1-202ENST00000374949 IGLV3-22A0A075B6J6 115 aa12.2□□□□□ -0.46
HLA-DQA1-202ENST00000374949 POTEB3A0JP26 581 aa12.2□□□□□ -0.46
HLA-DQA1-202ENST00000374949 C5orf67F2Z3F1 127 aa12.2□□□□□ -0.46
HLA-DQA1-202ENST00000374949 MSH4O15457 936 aa12.2□□□□□ -0.46
HLA-DQA1-202ENST00000374949 LINC01565O15544 149 aa12.2□□□□□ -0.46
HLA-DQA1-202ENST00000374949 STAM2O75886 525 aa12.2□□□□□ -0.46
HLA-DQA1-202ENST00000374949 MARK3P27448 753 aa12.2□□□□□ -0.46
HLA-DQA1-202ENST00000374949 IRS1P35568 1242 aa12.2□□□□□ -0.46
HLA-DQA1-202ENST00000374949 MRE11P49959 708 aa12.2□□□□□ -0.46
HLA-DQA1-202ENST00000374949 NHLH1Q02575 133 aa12.2□□□□□ -0.46
HLA-DQA1-202ENST00000374949 MGAT3Q09327 533 aa12.2□□□□□ -0.46
HLA-DQA1-202ENST00000374949 POTEBQ6S5H4 581 aa12.2□□□□□ -0.46
HLA-DQA1-202ENST00000374949 HFE2Q6ZVN8 426 aa12.2□□□□□ -0.46
HLA-DQA1-202ENST00000374949 CABP7Q86V35 215 aa12.2□□□□□ -0.46
HLA-DQA1-202ENST00000374949 CKAP2LQ8IYA6 745 aa12.2□□□□□ -0.46
HLA-DQA1-202ENST00000374949 CEP57L1Q8IYX8 460 aa12.2□□□□□ -0.46
HLA-DQA1-202ENST00000374949 PDILTQ8N807 584 aa12.2□□□□□ -0.46
HLA-DQA1-202ENST00000374949 CYP2W1Q8TAV3 490 aa12.2□□□□□ -0.46
HLA-DQA1-202ENST00000374949 ETNPPLQ8TBG4 499 aa12.2□□□□□ -0.46
HLA-DQA1-202ENST00000374949 LENG9Q96B70 501 aa12.2□□□□□ -0.46
HLA-DQA1-202ENST00000374949 FBXL18Q96ME1 805 aa12.2□□□□□ -0.46
HLA-DQA1-202ENST00000374949 SERTAD1Q9UHV2 236 aa12.2□□□□□ -0.46
HLA-DQA1-202ENST00000374949 MUTYHQ9UIF7 546 aa12.2□□□□□ -0.46
HLA-DQA1-202ENST00000374949 UBIAD1Q9Y5Z9 338 aa12.2□□□□□ -0.46
HLA-DQA1-202ENST00000374949 C5orf42Q9H799 3197 aa12.2□□□□□ -0.46
HLA-DQA1-202ENST00000374949 NRCAMQ92823 1304 aa12.19□□□□□ -0.46
HLA-DQA1-202ENST00000374949 MBTPS2O43462 519 aa12.19□□□□□ -0.46
HLA-DQA1-202ENST00000374949 SLC26A4O43511 780 aa12.19□□□□□ -0.46
HLA-DQA1-202ENST00000374949 SLFN14P0C7P3 912 aa12.19□□□□□ -0.46
HLA-DQA1-202ENST00000374949 CDC25AP30304 524 aa12.19□□□□□ -0.46
HLA-DQA1-202ENST00000374949 TCF7P36402 384 aaPredicted RBP12.19□□□□□ -0.46
HLA-DQA1-202ENST00000374949 BMPR1AP36894 532 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms