RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 CYP4A11Q02928 519 aa15.21■□□□□ 0.03
HMGCL-203ENST00000374490 MYBPC2Q14324 1141 aa15.21■□□□□ 0.03
HMGCL-203ENST00000374490 RPS6KA1Q15418 735 aa15.21■□□□□ 0.03
HMGCL-203ENST00000374490 DCAF17Q5H9S7 520 aaPredicted RBP15.21■□□□□ 0.03
HMGCL-203ENST00000374490 OTOP1Q7RTM1 612 aa15.21■□□□□ 0.03
HMGCL-203ENST00000374490 GSPT2Q8IYD1 628 aaKnown RBP15.21■□□□□ 0.03
HMGCL-203ENST00000374490 SYCE1Q8N0S2 351 aa15.21■□□□□ 0.03
HMGCL-203ENST00000374490 FAM76AQ8TAV0 307 aa15.21■□□□□ 0.03
HMGCL-203ENST00000374490 SLC35C1Q96A29 364 aa15.21■□□□□ 0.03
HMGCL-203ENST00000374490 INPP4AQ96PE3 977 aaPredicted RBP15.21■□□□□ 0.03
HMGCL-203ENST00000374490 NACC1Q96RE7 527 aa15.21■□□□□ 0.03
HMGCL-203ENST00000374490 UIMC1Q96RL1 719 aa15.21■□□□□ 0.03
HMGCL-203ENST00000374490 RANBP17Q9H2T7 1088 aaKnown RBP15.21■□□□□ 0.03
HMGCL-203ENST00000374490 PARVGQ9HBI0 331 aa15.21■□□□□ 0.03
HMGCL-203ENST00000374490 NENFQ9UMX5 172 aa15.21■□□□□ 0.03
HMGCL-203ENST00000374490 EML1O00423 815 aa15.21■□□□□ 0.02
HMGCL-203ENST00000374490 GAS7O60861 476 aa15.21■□□□□ 0.02
HMGCL-203ENST00000374490 PHACTR2O75167 634 aa15.21■□□□□ 0.02
HMGCL-203ENST00000374490 FTCDO95954 541 aa15.21■□□□□ 0.02
HMGCL-203ENST00000374490 CCDC172P0C7W6 258 aa15.21■□□□□ 0.02
HMGCL-203ENST00000374490 HOXA13P31271 388 aaPredicted RBP15.21■□□□□ 0.02
HMGCL-203ENST00000374490 ARID5AQ03989 594 aa15.21■□□□□ 0.02
HMGCL-203ENST00000374490 PTK2Q05397 1052 aa15.21■□□□□ 0.02
HMGCL-203ENST00000374490 NOGQ13253 232 aa15.21■□□□□ 0.02
HMGCL-203ENST00000374490 TBC1D10BQ4KMP7 808 aaPredicted RBP15.21■□□□□ 0.02
HMGCL-203ENST00000374490 TCERG1LQ5VWI1 586 aa15.21■□□□□ 0.02
HMGCL-203ENST00000374490 C1orf186Q6ZWK4 172 aa15.21■□□□□ 0.02
HMGCL-203ENST00000374490 HS2ST1Q7LGA3 356 aa15.21■□□□□ 0.02
HMGCL-203ENST00000374490 ZNF571Q7Z3V5 609 aaPredicted RBP15.21■□□□□ 0.02
HMGCL-203ENST00000374490 FAM186BQ8IYM0 893 aa15.21■□□□□ 0.02
HMGCL-203ENST00000374490 VTI1AQ96AJ9 217 aa15.21■□□□□ 0.02
HMGCL-203ENST00000374490 SH3GL2Q99962 352 aa15.21■□□□□ 0.02
HMGCL-203ENST00000374490 THSD7BQ9C0I4 1608 aa15.21■□□□□ 0.02
HMGCL-203ENST00000374490 SIX2Q9NPC8 291 aa15.21■□□□□ 0.02
HMGCL-203ENST00000374490 GCNT4Q9P109 453 aa15.21■□□□□ 0.02
HMGCL-203ENST00000374490 NAGPAQ9UK23 515 aa15.21■□□□□ 0.02
HMGCL-203ENST00000374490 A0A1W2PRG0 241 aa15.2■□□□□ 0.02
HMGCL-203ENST00000374490 GOLGA6CA6NDK9 693 aa15.2■□□□□ 0.02
HMGCL-203ENST00000374490 CCDC85CA6NKD9 419 aa15.2■□□□□ 0.02
HMGCL-203ENST00000374490 RSPH10B2B2RC85 870 aa15.2■□□□□ 0.02
HMGCL-203ENST00000374490 AGPSO00116 658 aa15.2■□□□□ 0.02
HMGCL-203ENST00000374490 H2AFZP0C0S5 128 aa15.2■□□□□ 0.02
HMGCL-203ENST00000374490 RSPH10BP0C881 870 aa15.2■□□□□ 0.02
HMGCL-203ENST00000374490 GOLGA6DP0CG33 693 aa15.2■□□□□ 0.02
HMGCL-203ENST00000374490 ACTN1P12814 892 aa15.2■□□□□ 0.02
HMGCL-203ENST00000374490 RFX1P22670 979 aa15.2■□□□□ 0.02
HMGCL-203ENST00000374490 ZNF131P52739 623 aa15.2■□□□□ 0.02
HMGCL-203ENST00000374490 HUNKP57058 714 aa15.2■□□□□ 0.02
HMGCL-203ENST00000374490 RASA3Q14644 834 aa15.2■□□□□ 0.02
HMGCL-203ENST00000374490 PPP2R5AQ15172 486 aa15.2■□□□□ 0.02
HMGCL-203ENST00000374490 ALKBH5Q6P6C2 394 aaKnown RBP15.2■□□□□ 0.02
HMGCL-203ENST00000374490 H2AFVQ71UI9 128 aa15.2■□□□□ 0.02
HMGCL-203ENST00000374490 SAMD7Q7Z3H4 446 aa15.2■□□□□ 0.02
HMGCL-203ENST00000374490 GPIHBP1Q8IV16 184 aa15.2■□□□□ 0.02
HMGCL-203ENST00000374490 MREGQ8N565 214 aa15.2■□□□□ 0.02
HMGCL-203ENST00000374490 MYCT1Q8N699 235 aa15.2■□□□□ 0.02
HMGCL-203ENST00000374490 WHAMMQ8TF30 809 aa15.2■□□□□ 0.02
HMGCL-203ENST00000374490 HDAC7Q8WUI4 952 aa15.2■□□□□ 0.02
HMGCL-203ENST00000374490 BORCS6Q96GS4 357 aa15.2■□□□□ 0.02
HMGCL-203ENST00000374490 DYDC2Q96IM9 177 aa15.2■□□□□ 0.02
HMGCL-203ENST00000374490 CALR3Q96L12 384 aaKnown RBP15.2■□□□□ 0.02
HMGCL-203ENST00000374490 PSMB7Q99436 277 aa15.2■□□□□ 0.02
HMGCL-203ENST00000374490 GOLGA6AQ9NYA3 693 aa15.2■□□□□ 0.02
HMGCL-203ENST00000374490 ZBTB21Q9ULJ3 1066 aa15.2■□□□□ 0.02
HMGCL-203ENST00000374490 KIF4AO95239 1232 aa15.19■□□□□ 0.02
HMGCL-203ENST00000374490 ALCAMQ13740 583 aa15.19■□□□□ 0.02
HMGCL-203ENST00000374490 CTTNQ14247 550 aaKnown RBP15.19■□□□□ 0.02
HMGCL-203ENST00000374490 MIGA2Q7L4E1 593 aa15.19■□□□□ 0.02
HMGCL-203ENST00000374490 TPH2Q8IWU9 490 aa15.19■□□□□ 0.02
HMGCL-203ENST00000374490 USP38Q8NB14 1042 aa15.19■□□□□ 0.02
HMGCL-203ENST00000374490 ACTRT1Q8TDG2 376 aa15.19■□□□□ 0.02
HMGCL-203ENST00000374490 DCPSQ96C86 337 aaKnown RBP15.19■□□□□ 0.02
HMGCL-203ENST00000374490 WDR18Q9BV38 432 aa15.19■□□□□ 0.02
HMGCL-203ENST00000374490 TEKT3Q9BXF9 490 aa15.19■□□□□ 0.02
HMGCL-203ENST00000374490 DEFB129Q9H1M3 183 aa15.19■□□□□ 0.02
HMGCL-203ENST00000374490 RGL1Q9NZL6 768 aa15.19■□□□□ 0.02
HMGCL-203ENST00000374490 PCDHB13Q9Y5F0 798 aa15.19■□□□□ 0.02
HMGCL-203ENST00000374490 ZMYM2Q9UBW7 1377 aa15.18■□□□□ 0.02
HMGCL-203ENST00000374490 TULP2O00295 520 aa15.18■□□□□ 0.02
HMGCL-203ENST00000374490 TGFB1I1O43294 461 aa15.18■□□□□ 0.02
HMGCL-203ENST00000374490 SHOX2O60902 331 aaPredicted RBP15.18■□□□□ 0.02
HMGCL-203ENST00000374490 SLITRK3O94933 977 aa15.18■□□□□ 0.02
HMGCL-203ENST00000374490 HEXIM1O94992 359 aaKnown RBP15.18■□□□□ 0.02
HMGCL-203ENST00000374490 EGFRP00533 1210 aa15.18■□□□□ 0.02
HMGCL-203ENST00000374490 CFBP00751 764 aa15.18■□□□□ 0.02
HMGCL-203ENST00000374490 GUCY2CP25092 1073 aa15.18■□□□□ 0.02
HMGCL-203ENST00000374490 JAG1P78504 1218 aa15.18■□□□□ 0.02
HMGCL-203ENST00000374490 RRP1BQ14684 758 aaKnown RBP15.18■□□□□ 0.02
HMGCL-203ENST00000374490 CEP55Q53EZ4 464 aa15.18■□□□□ 0.02
HMGCL-203ENST00000374490 SLC9A9Q8IVB4 645 aa15.18■□□□□ 0.02
HMGCL-203ENST00000374490 RIT2Q99578 217 aa15.18■□□□□ 0.02
HMGCL-203ENST00000374490 PACSIN1Q9BY11 444 aa15.18■□□□□ 0.02
HMGCL-203ENST00000374490 EHD2Q9NZN4 543 aa15.18■□□□□ 0.02
HMGCL-203ENST00000374490 FEM1BQ9UK73 627 aa15.18■□□□□ 0.02
HMGCL-203ENST00000374490 FRMD4BQ9Y2L6 1034 aa15.18■□□□□ 0.02
HMGCL-203ENST00000374490 CCDC188H7C350 402 aa15.17■□□□□ 0.02
HMGCL-203ENST00000374490 MAPTP10636 758 aaKnown RBP15.17■□□□□ 0.02
HMGCL-203ENST00000374490 NOP2P46087 812 aaKnown RBP15.17■□□□□ 0.02
HMGCL-203ENST00000374490 SLC7A5Q01650 507 aa15.17■□□□□ 0.02
HMGCL-203ENST00000374490 ENOX2Q16206 610 aaKnown RBP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms