RNA–Protein interactions for RNA: ENST00000373198.8

PTPRT-206, Transcript of protein tyrosine phosphatase, receptor type T, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRT, Length 12,746 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRT-206ENST00000373198 DEPDC7Q96QD5 511 aa9.64□□□□□ -0.87
PTPRT-206ENST00000373198 COPB1P53618 953 aaKnown RBP9.64□□□□□ -0.87
PTPRT-206ENST00000373198 COBLL1Q53SF7 1204 aa9.64□□□□□ -0.87
PTPRT-206ENST00000373198 TBC1D1Q86TI0 1168 aaPredicted RBP9.64□□□□□ -0.87
PTPRT-206ENST00000373198 TRIM69Q86WT6 500 aa9.64□□□□□ -0.87
PTPRT-206ENST00000373198 MAPK13O15264 365 aa9.64□□□□□ -0.87
PTPRT-206ENST00000373198 HDAC4P56524 1084 aa9.64□□□□□ -0.87
PTPRT-206ENST00000373198 AGBL1Q96MI9 1066 aa9.64□□□□□ -0.87
PTPRT-206ENST00000373198 UNC45AQ9H3U1 944 aa9.64□□□□□ -0.87
PTPRT-206ENST00000373198 APOBEC2Q9Y235 224 aaKnown RBP9.64□□□□□ -0.87
PTPRT-206ENST00000373198 MCTP2Q6DN12 878 aa9.64□□□□□ -0.87
PTPRT-206ENST00000373198 BTNL9Q6UXG8 535 aa9.64□□□□□ -0.87
PTPRT-206ENST00000373198 DNAJC10Q8IXB1 793 aa9.64□□□□□ -0.87
PTPRT-206ENST00000373198 AMNQ9BXJ7 453 aa9.64□□□□□ -0.87
PTPRT-206ENST00000373198 DAB1O75553 588 aa9.63□□□□□ -0.87
PTPRT-206ENST00000373198 USP14P54578 494 aa9.63□□□□□ -0.87
PTPRT-206ENST00000373198 PLEKHA8Q96JA3 519 aa9.63□□□□□ -0.87
PTPRT-206ENST00000373198 ARHGEF3Q9NR81 526 aa9.63□□□□□ -0.87
PTPRT-206ENST00000373198 EPN1Q9Y6I3 576 aaPredicted RBP9.63□□□□□ -0.87
PTPRT-206ENST00000373198 MOCS2O96007 188 aaPredicted RBP9.63□□□□□ -0.87
PTPRT-206ENST00000373198 GAP43P17677 238 aa9.63□□□□□ -0.87
PTPRT-206ENST00000373198 TBC1D19Q8N5T2 526 aa9.63□□□□□ -0.87
PTPRT-206ENST00000373198 MAGEB5Q9BZ81 275 aa9.63□□□□□ -0.87
PTPRT-206ENST00000373198 TSC22D4Q9Y3Q8 395 aa9.63□□□□□ -0.87
PTPRT-206ENST00000373198 ZC3H4Q9UPT8 1303 aaKnown RBP9.63□□□□□ -0.87
PTPRT-206ENST00000373198 COPEO14579 308 aa9.63□□□□□ -0.87
PTPRT-206ENST00000373198 GYG2O15488 501 aa9.63□□□□□ -0.87
PTPRT-206ENST00000373198 SOX11P35716 441 aa9.63□□□□□ -0.87
PTPRT-206ENST00000373198 MXI1P50539 228 aa9.63□□□□□ -0.87
PTPRT-206ENST00000373198 TRIM48Q8IWZ4 208 aa9.63□□□□□ -0.87
PTPRT-206ENST00000373198 BCL2L14Q9BZR8 327 aa9.63□□□□□ -0.87
PTPRT-206ENST00000373198 TNNQ9UQP3 1299 aa9.63□□□□□ -0.87
PTPRT-206ENST00000373198 SRGAP2O75044 1071 aa9.63□□□□□ -0.87
PTPRT-206ENST00000373198 MED21Q13503 144 aa9.63□□□□□ -0.87
PTPRT-206ENST00000373198 RCSD1Q6JBY9 416 aa9.63□□□□□ -0.87
PTPRT-206ENST00000373198 HDDC2Q7Z4H3 204 aa9.63□□□□□ -0.87
PTPRT-206ENST00000373198 CNKSR1Q969H4 720 aa9.63□□□□□ -0.87
PTPRT-206ENST00000373198 ZNF668Q96K58 619 aaPredicted RBP9.63□□□□□ -0.87
PTPRT-206ENST00000373198 MLXIPLQ9NP71 852 aa9.63□□□□□ -0.87
PTPRT-206ENST00000373198 MAD2L2Q9UI95 211 aa9.63□□□□□ -0.87
PTPRT-206ENST00000373198 ZNF699Q32M78 642 aa9.63□□□□□ -0.87
PTPRT-206ENST00000373198 FAM32AQ9Y421 112 aaKnown RBP9.63□□□□□ -0.87
PTPRT-206ENST00000373198 GCP02774 474 aa9.63□□□□□ -0.87
PTPRT-206ENST00000373198 CHRNA3P32297 505 aa9.63□□□□□ -0.87
PTPRT-206ENST00000373198 HIBCHQ6NVY1 386 aaPredicted RBP9.63□□□□□ -0.87
PTPRT-206ENST00000373198 PGRMC1O00264 195 aaKnown RBP9.63□□□□□ -0.87
PTPRT-206ENST00000373198 LZTS3O60299 673 aaPredicted RBP9.63□□□□□ -0.87
PTPRT-206ENST00000373198 CCDC15Q0P6D6 951 aa9.63□□□□□ -0.87
PTPRT-206ENST00000373198 USP28Q96RU2 1077 aa9.63□□□□□ -0.87
PTPRT-206ENST00000373198 TNKSO95271 1327 aa9.63□□□□□ -0.87
PTPRT-206ENST00000373198 C6orf118Q5T5N4 469 aa9.63□□□□□ -0.87
PTPRT-206ENST00000373198 VN1R5Q7Z5H4 357 aa9.63□□□□□ -0.87
PTPRT-206ENST00000373198 UTP6Q9NYH9 597 aaKnown RBP9.63□□□□□ -0.87
PTPRT-206ENST00000373198 RIMS2Q9UQ26 1411 aa9.63□□□□□ -0.87
PTPRT-206ENST00000373198 GNAT1P11488 350 aa9.63□□□□□ -0.87
PTPRT-206ENST00000373198 HPCAP84074 193 aa9.63□□□□□ -0.87
PTPRT-206ENST00000373198 SYDE2Q5VT97 1194 aa9.63□□□□□ -0.87
PTPRT-206ENST00000373198 KLHL24Q6TFL4 600 aa9.63□□□□□ -0.87
PTPRT-206ENST00000373198 ADCK1Q86TW2 530 aa9.63□□□□□ -0.87
PTPRT-206ENST00000373198 EDC3Q96F86 508 aaKnown RBP9.63□□□□□ -0.87
PTPRT-206ENST00000373198 TUBB6Q9BUF5 446 aa9.63□□□□□ -0.87
PTPRT-206ENST00000373198 SIK2Q9H0K1 926 aa9.63□□□□□ -0.87
PTPRT-206ENST00000373198 CCDC151A5D8V7 595 aa9.63□□□□□ -0.87
PTPRT-206ENST00000373198 TJP3O95049 919 aa9.63□□□□□ -0.87
PTPRT-206ENST00000373198 MRPS25P82663 173 aaKnown RBP9.63□□□□□ -0.87
PTPRT-206ENST00000373198 IYDQ6PHW0 289 aa9.63□□□□□ -0.87
PTPRT-206ENST00000373198 PDIK1LQ8N165 341 aa9.63□□□□□ -0.87
PTPRT-206ENST00000373198 FMO2Q99518 471 aa9.63□□□□□ -0.87
PTPRT-206ENST00000373198 TJP2Q9UDY2 1190 aa9.63□□□□□ -0.87
PTPRT-206ENST00000373198 DTNAQ9Y4J8 743 aa9.63□□□□□ -0.87
PTPRT-206ENST00000373198 ADGRA2Q96PE1 1338 aa9.63□□□□□ -0.87
PTPRT-206ENST00000373198 CAPN1P07384 714 aa9.62□□□□□ -0.87
PTPRT-206ENST00000373198 IFNL3Q8IZI9 196 aa9.62□□□□□ -0.87
PTPRT-206ENST00000373198 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.62□□□□□ -0.87
PTPRT-206ENST00000373198 DDX5P17844 614 aaKnown RBP9.62□□□□□ -0.87
PTPRT-206ENST00000373198 CTTNQ14247 550 aaKnown RBP9.62□□□□□ -0.87
PTPRT-206ENST00000373198 SYT2Q8N9I0 419 aaPredicted RBP9.62□□□□□ -0.87
PTPRT-206ENST00000373198 FANCBQ8NB91 859 aa9.62□□□□□ -0.87
PTPRT-206ENST00000373198 H2AFY2Q9P0M6 372 aaPredicted RBP9.62□□□□□ -0.87
PTPRT-206ENST00000373198 KIAA1468Q9P260 1216 aa9.62□□□□□ -0.87
PTPRT-206ENST00000373198 ARHGAP17Q68EM7 881 aa9.62□□□□□ -0.87
PTPRT-206ENST00000373198 COA7Q96BR5 231 aa9.62□□□□□ -0.87
PTPRT-206ENST00000373198 KIF1BO60333 1816 aa9.62□□□□□ -0.87
PTPRT-206ENST00000373198 A0A1B0GW55 424 aa9.62□□□□□ -0.87
PTPRT-206ENST00000373198 RASSF10A6NK89 507 aa9.62□□□□□ -0.87
PTPRT-206ENST00000373198 CYTH3O43739 400 aa9.62□□□□□ -0.87
PTPRT-206ENST00000373198 DUX4L2P0CJ85 424 aa9.62□□□□□ -0.87
PTPRT-206ENST00000373198 DUX4L3P0CJ86 424 aa9.62□□□□□ -0.87
PTPRT-206ENST00000373198 DUX4L4P0CJ87 422 aa9.62□□□□□ -0.87
PTPRT-206ENST00000373198 DUX4L5P0CJ88 424 aa9.62□□□□□ -0.87
PTPRT-206ENST00000373198 DUX4L6P0CJ89 424 aa9.62□□□□□ -0.87
PTPRT-206ENST00000373198 DUX4L7P0CJ90 424 aa9.62□□□□□ -0.87
PTPRT-206ENST00000373198 ADORA2BP29275 332 aa9.62□□□□□ -0.87
PTPRT-206ENST00000373198 SNX31Q8N9S9 440 aa9.62□□□□□ -0.87
PTPRT-206ENST00000373198 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.62□□□□□ -0.87
PTPRT-206ENST00000373198 DUX4Q9UBX2 424 aa9.62□□□□□ -0.87
PTPRT-206ENST00000373198 TTC7AQ9ULT0 858 aaPredicted RBP9.62□□□□□ -0.87
PTPRT-206ENST00000373198 KDM5BQ9UGL1 1544 aa9.62□□□□□ -0.87
PTPRT-206ENST00000373198 ANKRD65E5RJM6 399 aa9.62□□□□□ -0.87
PTPRT-206ENST00000373198 SH3GL2Q99962 352 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms