RNA–Protein interactions for RNA: ENST00000372736.3

COL9A2-201, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 319 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-201ENST00000372736 EPC2Q52LR7 807 aa25.37■■□□□ 1.65
COL9A2-201ENST00000372736 TTC38Q5R3I4 469 aa25.37■■□□□ 1.65
COL9A2-201ENST00000372736 NEK9Q8TD19 979 aa25.37■■□□□ 1.65
COL9A2-201ENST00000372736 CEP170P1Q96L14 293 aa25.37■■□□□ 1.65
COL9A2-201ENST00000372736 SCLT1Q96NL6 688 aa25.37■■□□□ 1.65
COL9A2-201ENST00000372736 SAMD11Q96NU1 681 aa25.37■■□□□ 1.65
COL9A2-201ENST00000372736 DHX33Q9H6R0 707 aaKnown RBP25.37■■□□□ 1.65
COL9A2-201ENST00000372736 PRDM6Q9NQX0 595 aa25.37■■□□□ 1.65
COL9A2-201ENST00000372736 RGS18Q9NS28 235 aa25.37■■□□□ 1.65
COL9A2-201ENST00000372736 KIF3AQ9Y496 699 aa25.37■■□□□ 1.65
COL9A2-201ENST00000372736 DENND3A2RUS2 1198 aa25.36■■□□□ 1.65
COL9A2-201ENST00000372736 ZBTB39O15060 712 aa25.36■■□□□ 1.65
COL9A2-201ENST00000372736 LYPLA2O95372 231 aa25.36■■□□□ 1.65
COL9A2-201ENST00000372736 DNM2P50570 870 aa25.36■■□□□ 1.65
COL9A2-201ENST00000372736 TPH2Q8IWU9 490 aa25.36■■□□□ 1.65
COL9A2-201ENST00000372736 FIBCD1Q8N539 461 aa25.36■■□□□ 1.65
COL9A2-201ENST00000372736 NLRP7Q8WX94 980 aa25.36■■□□□ 1.65
COL9A2-201ENST00000372736 JPH2Q9BR39 696 aaPredicted RBP25.36■■□□□ 1.65
COL9A2-201ENST00000372736 C1orf112Q9NSG2 853 aa25.36■■□□□ 1.65
COL9A2-201ENST00000372736 SUCLA2Q9P2R7 463 aaPredicted RBP25.36■■□□□ 1.65
COL9A2-201ENST00000372736 FNDC1Q4ZHG4 1894 aaPredicted RBP25.35■■□□□ 1.65
COL9A2-201ENST00000372736 C9IYK1 514 aa25.35■■□□□ 1.65
COL9A2-201ENST00000372736 OR52Z1P0C646 297 aa25.35■■□□□ 1.65
COL9A2-201ENST00000372736 STAG3L1P0CL83 205 aa25.35■■□□□ 1.65
COL9A2-201ENST00000372736 GJB2P29033 226 aa25.35■■□□□ 1.65
COL9A2-201ENST00000372736 RFC5P40937 340 aa25.35■■□□□ 1.65
COL9A2-201ENST00000372736 NBR1Q14596 966 aa25.35■■□□□ 1.65
COL9A2-201ENST00000372736 TMEM192Q8IY95 271 aa25.35■■□□□ 1.65
COL9A2-201ENST00000372736 SLC7A3Q8WY07 619 aa25.35■■□□□ 1.65
COL9A2-201ENST00000372736 POLGP54098 1239 aaPredicted RBP25.34■■□□□ 1.65
COL9A2-201ENST00000372736 CDC42EP1Q00587 391 aa25.34■■□□□ 1.65
COL9A2-201ENST00000372736 BTG3Q14201 252 aaPredicted RBP25.34■■□□□ 1.65
COL9A2-201ENST00000372736 SLC24A5Q71RS6 500 aa25.34■■□□□ 1.65
COL9A2-201ENST00000372736 OTUD6AQ7L8S5 288 aa25.34■■□□□ 1.65
COL9A2-201ENST00000372736 ZNF410Q86VK4 478 aa25.34■■□□□ 1.65
COL9A2-201ENST00000372736 RHPN2Q8IUC4 686 aa25.34■■□□□ 1.65
COL9A2-201ENST00000372736 CMTR2Q8IYT2 770 aaKnown RBP25.34■■□□□ 1.65
COL9A2-201ENST00000372736 CLP1Q92989 425 aaKnown RBP25.34■■□□□ 1.65
COL9A2-201ENST00000372736 NOL7Q9UMY1 257 aaKnown RBP25.34■■□□□ 1.65
COL9A2-201ENST00000372736 A0A087WZ62 844 aa25.33■■□□□ 1.65
COL9A2-201ENST00000372736 FGFR4P22455 802 aa25.33■■□□□ 1.65
COL9A2-201ENST00000372736 GATMP50440 423 aa25.33■■□□□ 1.65
COL9A2-201ENST00000372736 TOB1P50616 345 aaPredicted RBP25.33■■□□□ 1.65
COL9A2-201ENST00000372736 EMC2Q15006 297 aa25.33■■□□□ 1.65
COL9A2-201ENST00000372736 XKR9Q5GH70 373 aa25.33■■□□□ 1.65
COL9A2-201ENST00000372736 KSR1Q8IVT5 923 aa25.33■■□□□ 1.65
COL9A2-201ENST00000372736 EXOC8Q8IYI6 725 aa25.33■■□□□ 1.65
COL9A2-201ENST00000372736 FDXACB1Q9BRP7 624 aaPredicted RBP25.33■■□□□ 1.65
COL9A2-201ENST00000372736 GCOM2Q9BZD3 368 aaPredicted RBP25.33■■□□□ 1.65
COL9A2-201ENST00000372736 BMP2KQ9NSY1 1161 aaPredicted RBP25.33■■□□□ 1.65
COL9A2-201ENST00000372736 LMCD1Q9NZU5 365 aa25.33■■□□□ 1.65
COL9A2-201ENST00000372736 LRFN2Q9ULH4 789 aa25.33■■□□□ 1.65
COL9A2-201ENST00000372736 ATG2AQ2TAZ0 1938 aa25.33■■□□□ 1.65
COL9A2-201ENST00000372736 CSDE1O75534 798 aaKnown RBP25.32■■□□□ 1.64
COL9A2-201ENST00000372736 IBSPP21815 317 aaPredicted RBP25.32■■□□□ 1.64
COL9A2-201ENST00000372736 C4orf32Q8N8J7 132 aa25.32■■□□□ 1.64
COL9A2-201ENST00000372736 COL4A3BPQ9Y5P4 624 aa25.32■■□□□ 1.64
COL9A2-201ENST00000372736 MRPL42Q9Y6G3 142 aaKnown RBP25.32■■□□□ 1.64
COL9A2-201ENST00000372736 CUL9Q8IWT3 2517 aa25.31■■□□□ 1.64
COL9A2-201ENST00000372736 C5orf67F2Z3F1 127 aa25.31■■□□□ 1.64
COL9A2-201ENST00000372736 H3BNC9 293 aa25.31■■□□□ 1.64
COL9A2-201ENST00000372736 GAS2O43903 313 aaKnown RBP25.31■■□□□ 1.64
COL9A2-201ENST00000372736 SPATA31C1P0DKV0 1188 aa25.31■■□□□ 1.64
COL9A2-201ENST00000372736 CTNNB1P35222 781 aa25.31■■□□□ 1.64
COL9A2-201ENST00000372736 TECP42680 631 aa25.31■■□□□ 1.64
COL9A2-201ENST00000372736 FAM189BP81408 668 aa25.31■■□□□ 1.64
COL9A2-201ENST00000372736 TMEM143Q96AN5 459 aa25.31■■□□□ 1.64
COL9A2-201ENST00000372736 NLRP4Q96MN2 994 aa25.31■■□□□ 1.64
COL9A2-201ENST00000372736 XPNPEP1Q9NQW7 623 aa25.31■■□□□ 1.64
COL9A2-201ENST00000372736 ANKEF1Q9NU02 776 aa25.31■■□□□ 1.64
COL9A2-201ENST00000372736 RWDD3Q9Y3V2 267 aa25.31■■□□□ 1.64
COL9A2-201ENST00000372736 PCDHB7Q9Y5E2 793 aa25.31■■□□□ 1.64
COL9A2-201ENST00000372736 BMPR1AP36894 532 aa25.3■■□□□ 1.64
COL9A2-201ENST00000372736 PAN2Q504Q3 1202 aaKnown RBP25.3■■□□□ 1.64
COL9A2-201ENST00000372736 PRPF31Q8WWY3 499 aaKnown RBP25.3■■□□□ 1.64
COL9A2-201ENST00000372736 PSPC1Q8WXF1 523 aaKnown RBP25.3■■□□□ 1.64
COL9A2-201ENST00000372736 IFT122Q9HBG6 1241 aa25.3■■□□□ 1.64
COL9A2-201ENST00000372736 TMEM161AQ9NX61 479 aa25.3■■□□□ 1.64
COL9A2-201ENST00000372736 THEGQ9P2T0 379 aa25.3■■□□□ 1.64
COL9A2-201ENST00000372736 SMC3Q9UQE7 1217 aa25.3■■□□□ 1.64
COL9A2-201ENST00000372736 PCDHB6Q9Y5E3 794 aa25.3■■□□□ 1.64
COL9A2-201ENST00000372736 VCANP13611 3396 aa25.3■■□□□ 1.64
COL9A2-201ENST00000372736 MED24O75448 989 aa25.29■■□□□ 1.64
COL9A2-201ENST00000372736 SFPQP23246 707 aaKnown RBP eCLIP25.29■■□□□ 1.64
COL9A2-201ENST00000372736 RARRES1P49788 294 aa25.29■■□□□ 1.64
COL9A2-201ENST00000372736 GPM6BQ13491 265 aa25.29■■□□□ 1.64
COL9A2-201ENST00000372736 CATSPER3Q86XQ3 398 aa25.29■■□□□ 1.64
COL9A2-201ENST00000372736 PIGOQ8TEQ8 1089 aa25.29■■□□□ 1.64
COL9A2-201ENST00000372736 MTRQ99707 1265 aa25.29■■□□□ 1.64
COL9A2-201ENST00000372736 ELAC1Q9H777 363 aaKnown RBP25.29■■□□□ 1.64
COL9A2-201ENST00000372736 TUFT1Q9NNX1 390 aa25.29■■□□□ 1.64
COL9A2-201ENST00000372736 RNF216Q9NWF9 866 aaPredicted RBP25.29■■□□□ 1.64
COL9A2-201ENST00000372736 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.29■■□□□ 1.64
COL9A2-201ENST00000372736 ZSCAN20P17040 1043 aaPredicted RBP25.28■■□□□ 1.64
COL9A2-201ENST00000372736 FXR2P51116 673 aaKnown RBP eCLIP25.28■■□□□ 1.64
COL9A2-201ENST00000372736 LAMTOR4Q0VGL1 99 aa25.28■■□□□ 1.64
COL9A2-201ENST00000372736 FAM102BQ5T8I3 360 aa25.28■■□□□ 1.64
COL9A2-201ENST00000372736 MCTP1Q6DN14 999 aa25.28■■□□□ 1.64
COL9A2-201ENST00000372736 TCP11Q8WWU5 503 aa25.28■■□□□ 1.64
COL9A2-201ENST00000372736 MRPL38Q96DV4 380 aaKnown RBP25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms