RNA–Protein interactions for RNA: ENST00000372216.8

COL4A6-202, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-202ENST00000372216 ZNF70Q9UC06 446 aaPredicted RBP10.52□□□□□ -0.73
COL4A6-202ENST00000372216 WDR91A4D1P6 747 aa10.52□□□□□ -0.73
COL4A6-202ENST00000372216 ENC1O14682 589 aa10.52□□□□□ -0.73
COL4A6-202ENST00000372216 MOCS3O95396 460 aa10.52□□□□□ -0.73
COL4A6-202ENST00000372216 KRT10P13645 584 aa10.52□□□□□ -0.73
COL4A6-202ENST00000372216 ALX1Q15699 326 aa10.52□□□□□ -0.73
COL4A6-202ENST00000372216 ZNF394Q53GI3 561 aa10.52□□□□□ -0.73
COL4A6-202ENST00000372216 TCP11X2Q5H9J9 407 aa10.52□□□□□ -0.73
COL4A6-202ENST00000372216 UNC13DQ70J99 1090 aa10.52□□□□□ -0.73
COL4A6-202ENST00000372216 OR6J1Q8NGC5 347 aa10.52□□□□□ -0.73
COL4A6-202ENST00000372216 TDRD7Q8NHU6 1098 aaKnown RBP10.52□□□□□ -0.73
COL4A6-202ENST00000372216 CALN1Q9BXU9 219 aa10.52□□□□□ -0.73
COL4A6-202ENST00000372216 OSBPL5Q9H0X9 879 aaPredicted RBP10.52□□□□□ -0.73
COL4A6-202ENST00000372216 NHEJ1Q9H9Q4 299 aaPredicted RBP10.52□□□□□ -0.73
COL4A6-202ENST00000372216 TOPORSQ9NS56 1045 aaPredicted RBP10.52□□□□□ -0.73
COL4A6-202ENST00000372216 CDC27P30260 824 aa10.52□□□□□ -0.73
COL4A6-202ENST00000372216 ITPK1Q13572 414 aa10.52□□□□□ -0.73
COL4A6-202ENST00000372216 SGO2Q562F6 1265 aa10.52□□□□□ -0.73
COL4A6-202ENST00000372216 ANGEL2Q5VTE6 544 aaKnown RBP10.52□□□□□ -0.73
COL4A6-202ENST00000372216 STYK1Q6J9G0 422 aa10.52□□□□□ -0.73
COL4A6-202ENST00000372216 PPP1R13BQ96KQ4 1090 aa10.52□□□□□ -0.73
COL4A6-202ENST00000372216 FAM20AQ96MK3 541 aa10.52□□□□□ -0.73
COL4A6-202ENST00000372216 SLC4A7Q9Y6M7 1214 aa10.52□□□□□ -0.73
COL4A6-202ENST00000372216 CIITAP33076 1130 aa10.51□□□□□ -0.73
COL4A6-202ENST00000372216 MXD4Q14582 209 aaPredicted RBP10.51□□□□□ -0.73
COL4A6-202ENST00000372216 ARL13BQ3SXY8 428 aa10.51□□□□□ -0.73
COL4A6-202ENST00000372216 BEST2Q8NFU1 509 aa10.51□□□□□ -0.73
COL4A6-202ENST00000372216 MAGOHBQ96A72 148 aaKnown RBP10.51□□□□□ -0.73
COL4A6-202ENST00000372216 FAM213AQ9BRX8 229 aa10.51□□□□□ -0.73
COL4A6-202ENST00000372216 USH1CQ9Y6N9 552 aa10.51□□□□□ -0.73
COL4A6-202ENST00000372216 PTPRMP28827 1452 aa10.51□□□□□ -0.73
COL4A6-202ENST00000372216 TECPR2O15040 1411 aa10.51□□□□□ -0.73
COL4A6-202ENST00000372216 FAM95CA0A1B0GW59 222 aa10.51□□□□□ -0.73
COL4A6-202ENST00000372216 TROVE2P10155 538 aaKnown RBP eCLIP10.51□□□□□ -0.732e-8■■■■■ 38.3
COL4A6-202ENST00000372216 FRA10AC1Q70Z53 315 aa10.51□□□□□ -0.73
COL4A6-202ENST00000372216 LDHDQ86WU2 507 aa10.51□□□□□ -0.73
COL4A6-202ENST00000372216 DEPDC1BQ8WUY9 529 aa10.51□□□□□ -0.73
COL4A6-202ENST00000372216 SNX19Q92543 992 aa10.51□□□□□ -0.73
COL4A6-202ENST00000372216 POTEB3A0JP26 581 aa10.51□□□□□ -0.73
COL4A6-202ENST00000372216 POTECB2RU33 542 aa10.51□□□□□ -0.73
COL4A6-202ENST00000372216 PRPF4O43172 522 aaKnown RBP eCLIP10.51□□□□□ -0.73
COL4A6-202ENST00000372216 CPP00450 1065 aa10.51□□□□□ -0.73
COL4A6-202ENST00000372216 P4HBP07237 508 aaKnown RBP10.51□□□□□ -0.73
COL4A6-202ENST00000372216 MUM1Q2TAK8 710 aa10.51□□□□□ -0.73
COL4A6-202ENST00000372216 POTEBQ6S5H4 581 aa10.51□□□□□ -0.73
COL4A6-202ENST00000372216 ERICH1Q86X53 443 aa10.51□□□□□ -0.73
COL4A6-202ENST00000372216 LMNTD2Q8IXW0 634 aa10.51□□□□□ -0.73
COL4A6-202ENST00000372216 OTULINQ96BN8 352 aa10.51□□□□□ -0.73
COL4A6-202ENST00000372216 FLT1P17948 1338 aa10.51□□□□□ -0.73
COL4A6-202ENST00000372216 CFAP69A5D8W1 941 aa10.51□□□□□ -0.73
COL4A6-202ENST00000372216 ORC4O43929 436 aa10.51□□□□□ -0.73
COL4A6-202ENST00000372216 SERPIND1P05546 499 aa10.51□□□□□ -0.73
COL4A6-202ENST00000372216 IRF1P10914 325 aa10.51□□□□□ -0.73
COL4A6-202ENST00000372216 EIF4A3P38919 411 aaKnown RBP10.51□□□□□ -0.73
COL4A6-202ENST00000372216 BASP1P80723 227 aaKnown RBP10.51□□□□□ -0.73
COL4A6-202ENST00000372216 TSPY1Q01534 308 aa10.51□□□□□ -0.73
COL4A6-202ENST00000372216 ZNF699Q32M78 642 aa10.51□□□□□ -0.73
COL4A6-202ENST00000372216 MORC4Q8TE76 937 aa10.51□□□□□ -0.73
COL4A6-202ENST00000372216 NDST4Q9H3R1 872 aa10.51□□□□□ -0.73
COL4A6-202ENST00000372216 PNPLA7Q6ZV29 1317 aa10.51□□□□□ -0.73
COL4A6-202ENST00000372216 ZC3H13Q5T200 1668 aaKnown RBP10.51□□□□□ -0.73
COL4A6-202ENST00000372216 FRMD3A2A2Y4 597 aa10.51□□□□□ -0.73
COL4A6-202ENST00000372216 GPC4O75487 556 aa10.51□□□□□ -0.73
COL4A6-202ENST00000372216 QARSP47897 775 aaKnown RBP10.51□□□□□ -0.73
COL4A6-202ENST00000372216 SNAPC2Q13487 334 aa10.51□□□□□ -0.73
COL4A6-202ENST00000372216 TAF1CQ15572 869 aaPredicted RBP10.51□□□□□ -0.73
COL4A6-202ENST00000372216 SLC35F6Q8N357 371 aa10.51□□□□□ -0.73
COL4A6-202ENST00000372216 TOM1L1O75674 476 aa10.5□□□□□ -0.73
COL4A6-202ENST00000372216 OAS2P29728 719 aaKnown RBP10.5□□□□□ -0.73
COL4A6-202ENST00000372216 SF3B3Q15393 1217 aaKnown RBP10.5□□□□□ -0.73
COL4A6-202ENST00000372216 TMEM259Q4ZIN3 620 aa10.5□□□□□ -0.73
COL4A6-202ENST00000372216 TRMT10CQ7L0Y3 403 aaKnown RBP10.5□□□□□ -0.73
COL4A6-202ENST00000372216 STAG2Q8N3U4 1231 aa10.5□□□□□ -0.73
COL4A6-202ENST00000372216 RNF10Q8N5U6 811 aaKnown RBP10.5□□□□□ -0.73
COL4A6-202ENST00000372216 MYRIPQ8NFW9 859 aa10.5□□□□□ -0.73
COL4A6-202ENST00000372216 GCOM2Q9BZD3 368 aaPredicted RBP10.5□□□□□ -0.73
COL4A6-202ENST00000372216 C2orf40Q9H1Z8 148 aa10.5□□□□□ -0.73
COL4A6-202ENST00000372216 POLD4Q9HCU8 107 aa10.5□□□□□ -0.73
COL4A6-202ENST00000372216 DNAJC17Q9NVM6 304 aaKnown RBP10.5□□□□□ -0.73
COL4A6-202ENST00000372216 GGA3Q9NZ52 723 aa10.5□□□□□ -0.73
COL4A6-202ENST00000372216 NRBP1Q9UHY1 535 aa10.5□□□□□ -0.73
COL4A6-202ENST00000372216 CLNS1AP54105 237 aaKnown RBP10.5□□□□□ -0.73
COL4A6-202ENST00000372216 GUCY2DQ02846 1103 aa10.5□□□□□ -0.73
COL4A6-202ENST00000372216 SPOPLQ6IQ16 392 aa10.5□□□□□ -0.73
COL4A6-202ENST00000372216 CDC42EP5Q6NZY7 148 aa10.5□□□□□ -0.73
COL4A6-202ENST00000372216 KDELC2Q7Z4H8 507 aa10.5□□□□□ -0.73
COL4A6-202ENST00000372216 NEK9Q8TD19 979 aa10.5□□□□□ -0.73
COL4A6-202ENST00000372216 SRPK1Q96SB4 655 aaKnown RBP10.5□□□□□ -0.73
COL4A6-202ENST00000372216 LXNQ9BS40 222 aa10.5□□□□□ -0.73
COL4A6-202ENST00000372216 A6NNZ2 444 aa10.5□□□□□ -0.73
COL4A6-202ENST00000372216 PI4K2BG5E9Z4 385 aa10.5□□□□□ -0.73
COL4A6-202ENST00000372216 PIK3R2O00459 728 aa10.5□□□□□ -0.73
COL4A6-202ENST00000372216 HUS1O60921 280 aa10.5□□□□□ -0.73
COL4A6-202ENST00000372216 FTCDO95954 541 aa10.5□□□□□ -0.73
COL4A6-202ENST00000372216 FDX1P10109 184 aa10.5□□□□□ -0.73
COL4A6-202ENST00000372216 GMPSP49915 693 aaPredicted RBP10.5□□□□□ -0.73
COL4A6-202ENST00000372216 COASYQ13057 564 aa10.5□□□□□ -0.73
COL4A6-202ENST00000372216 TUBB8Q3ZCM7 444 aa10.5□□□□□ -0.73
COL4A6-202ENST00000372216 C12orf60Q5U649 245 aa10.5□□□□□ -0.73
COL4A6-202ENST00000372216 ENOX1Q8TC92 643 aaKnown RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms