RNA–Protein interactions for RNA: ENST00000372146.4

GTF3C4-201, Transcript of general transcription factor IIIC subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C4, Length 9,043 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-201ENST00000372146 EXOSC4Q9NPD3 245 aaKnown RBP16.28■□□□□ 0.2
GTF3C4-201ENST00000372146 PPARGP37231 505 aaPredicted RBP16.27■□□□□ 0.2
GTF3C4-201ENST00000372146 PPP2R5BQ15173 497 aa16.27■□□□□ 0.2
GTF3C4-201ENST00000372146 ZWILCHQ9H900 591 aa16.27■□□□□ 0.2
GTF3C4-201ENST00000372146 PDP2Q9P2J9 529 aa16.27■□□□□ 0.2
GTF3C4-201ENST00000372146 E7EWF7 191 aa16.27■□□□□ 0.2
GTF3C4-201ENST00000372146 MTRF1O75570 445 aaKnown RBP16.27■□□□□ 0.2
GTF3C4-201ENST00000372146 ZNF710Q8N1W2 664 aa16.27■□□□□ 0.2
GTF3C4-201ENST00000372146 ZMYM6O95789 1325 aa16.27■□□□□ 0.2
GTF3C4-201ENST00000372146 RPRD2Q5VT52 1461 aaKnown RBP16.27■□□□□ 0.2
GTF3C4-201ENST00000372146 HSPA9P38646 679 aaKnown RBP16.27■□□□□ 0.2
GTF3C4-201ENST00000372146 ANO4Q32M45 955 aa16.27■□□□□ 0.2
GTF3C4-201ENST00000372146 C19orf18Q8NEA5 215 aa16.27■□□□□ 0.2
GTF3C4-201ENST00000372146 SYCP2Q9BX26 1530 aa16.27■□□□□ 0.2
GTF3C4-201ENST00000372146 POU5F1BQ06416 359 aa16.27■□□□□ 0.2
GTF3C4-201ENST00000372146 TTC33Q6PID6 262 aaPredicted RBP16.27■□□□□ 0.2
GTF3C4-201ENST00000372146 UNC45BQ8IWX7 931 aa16.27■□□□□ 0.2
GTF3C4-201ENST00000372146 MXD4Q14582 209 aaPredicted RBP16.27■□□□□ 0.19
GTF3C4-201ENST00000372146 RCSD1Q6JBY9 416 aa16.27■□□□□ 0.19
GTF3C4-201ENST00000372146 GRAMD1AQ96CP6 724 aa16.27■□□□□ 0.19
GTF3C4-201ENST00000372146 MRPL1Q9BYD6 325 aaKnown RBP16.27■□□□□ 0.19
GTF3C4-201ENST00000372146 HPS4Q9NQG7 708 aa16.27■□□□□ 0.19
GTF3C4-201ENST00000372146 NIP7Q9Y221 180 aaKnown RBP eCLIP16.27■□□□□ 0.19
GTF3C4-201ENST00000372146 IL12RB1P42701 662 aa16.27■□□□□ 0.19
GTF3C4-201ENST00000372146 KLHL38Q2WGJ6 581 aa16.27■□□□□ 0.19
GTF3C4-201ENST00000372146 KLHL17Q6TDP4 642 aa16.27■□□□□ 0.19
GTF3C4-201ENST00000372146 UBE2TQ9NPD8 197 aaPredicted RBP16.27■□□□□ 0.19
GTF3C4-201ENST00000372146 PODNQ7Z5L7 613 aa16.27■□□□□ 0.19
GTF3C4-201ENST00000372146 VPS11Q9H270 941 aa16.27■□□□□ 0.19
GTF3C4-201ENST00000372146 MCM8Q9UJA3 840 aa16.27■□□□□ 0.19
GTF3C4-201ENST00000372146 ARL2BPQ9Y2Y0 163 aa16.27■□□□□ 0.19
GTF3C4-201ENST00000372146 SGSM2O43147 1006 aa16.26■□□□□ 0.19
GTF3C4-201ENST00000372146 SGSM1Q2NKQ1 1148 aa16.26■□□□□ 0.19
GTF3C4-201ENST00000372146 ARHGEF16Q5VV41 709 aa16.26■□□□□ 0.19
GTF3C4-201ENST00000372146 NLRX1Q86UT6 975 aa16.26■□□□□ 0.19
GTF3C4-201ENST00000372146 TERB1Q8NA31 727 aa16.26■□□□□ 0.19
GTF3C4-201ENST00000372146 THTPAQ9BU02 230 aa16.26■□□□□ 0.19
GTF3C4-201ENST00000372146 NYXQ9GZU5 481 aa16.26■□□□□ 0.19
GTF3C4-201ENST00000372146 DISP3Q9P2K9 1392 aa16.26■□□□□ 0.19
GTF3C4-201ENST00000372146 AOC3Q16853 763 aa16.26■□□□□ 0.19
GTF3C4-201ENST00000372146 ZCWPW2Q504Y3 356 aa16.26■□□□□ 0.19
GTF3C4-201ENST00000372146 MRGBPQ9NV56 204 aa16.26■□□□□ 0.19
GTF3C4-201ENST00000372146 CCDC87Q9NVE4 849 aa16.26■□□□□ 0.19
GTF3C4-201ENST00000372146 ETAA1Q9NY74 926 aa16.26■□□□□ 0.19
GTF3C4-201ENST00000372146 MAPRE2Q15555 327 aa16.26■□□□□ 0.19
GTF3C4-201ENST00000372146 ZBTB8OSQ8IWT0 167 aa16.26■□□□□ 0.19
GTF3C4-201ENST00000372146 GLG1Q92896 1179 aa16.26■□□□□ 0.19
GTF3C4-201ENST00000372146 NT5C1BQ96P26 610 aa16.26■□□□□ 0.19
GTF3C4-201ENST00000372146 RIMBP2O15034 1052 aa16.26■□□□□ 0.19
GTF3C4-201ENST00000372146 GNAT1P11488 350 aa16.26■□□□□ 0.19
GTF3C4-201ENST00000372146 POLGP54098 1239 aaPredicted RBP16.26■□□□□ 0.19
GTF3C4-201ENST00000372146 PTGDRQ13258 359 aa16.26■□□□□ 0.19
GTF3C4-201ENST00000372146 RSRC2Q7L4I2 434 aaKnown RBP16.26■□□□□ 0.19
GTF3C4-201ENST00000372146 TTC6Q86TZ1 520 aa16.26■□□□□ 0.19
GTF3C4-201ENST00000372146 RNF135Q8IUD6 432 aa16.26■□□□□ 0.19
GTF3C4-201ENST00000372146 CUEDC2Q9H467 287 aa16.26■□□□□ 0.19
GTF3C4-201ENST00000372146 USP40Q9NVE5 1235 aa16.26■□□□□ 0.19
GTF3C4-201ENST00000372146 DDHD2O94830 711 aa16.26■□□□□ 0.19
GTF3C4-201ENST00000372146 KLHL12Q53G59 568 aa16.26■□□□□ 0.19
GTF3C4-201ENST00000372146 DEPDC7Q96QD5 511 aa16.26■□□□□ 0.19
GTF3C4-201ENST00000372146 HPS5Q9UPZ3 1129 aa16.26■□□□□ 0.19
GTF3C4-201ENST00000372146 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.26■□□□□ 0.19
GTF3C4-201ENST00000372146 PAPOLAP51003 745 aaKnown RBP16.26■□□□□ 0.19
GTF3C4-201ENST00000372146 MICU2Q8IYU8 434 aa16.26■□□□□ 0.19
GTF3C4-201ENST00000372146 ZCWPW1Q9H0M4 648 aa16.26■□□□□ 0.19
GTF3C4-201ENST00000372146 ARPP21Q9UBL0 812 aaPredicted RBP16.26■□□□□ 0.19
GTF3C4-201ENST00000372146 PDZK1P1A8MUH7 402 aa16.26■□□□□ 0.19
GTF3C4-201ENST00000372146 OR52Z1P0C646 297 aa16.26■□□□□ 0.19
GTF3C4-201ENST00000372146 MKRN3Q13064 507 aaKnown RBP16.26■□□□□ 0.19
GTF3C4-201ENST00000372146 IFNL2Q8IZJ0 200 aa16.26■□□□□ 0.19
GTF3C4-201ENST00000372146 ANKRD36BP1Q96IX9 119 aa16.26■□□□□ 0.19
GTF3C4-201ENST00000372146 COL4A3BPQ9Y5P4 624 aa16.26■□□□□ 0.19
GTF3C4-201ENST00000372146 CTTNQ14247 550 aaKnown RBP16.26■□□□□ 0.19
GTF3C4-201ENST00000372146 POTEAQ6S8J7 498 aa16.26■□□□□ 0.19
GTF3C4-201ENST00000372146 CAV1Q03135 178 aa16.25■□□□□ 0.19
GTF3C4-201ENST00000372146 C16orf89Q6UX73 402 aa16.25■□□□□ 0.19
GTF3C4-201ENST00000372146 RWDD2AQ9UIY3 292 aa16.25■□□□□ 0.19
GTF3C4-201ENST00000372146 MED7O43513 233 aa16.25■□□□□ 0.19
GTF3C4-201ENST00000372146 BNIPLQ7Z465 357 aa16.25■□□□□ 0.19
GTF3C4-201ENST00000372146 GOLPH3LQ9H4A5 285 aa16.25■□□□□ 0.19
GTF3C4-201ENST00000372146 DENND2AQ9ULE3 1009 aa16.25■□□□□ 0.19
GTF3C4-201ENST00000372146 A0A087WWV3 80 aa16.25■□□□□ 0.19
GTF3C4-201ENST00000372146 NMD3Q96D46 503 aaKnown RBP16.25■□□□□ 0.19
GTF3C4-201ENST00000372146 MTRQ99707 1265 aa16.25■□□□□ 0.19
GTF3C4-201ENST00000372146 TRPC7Q9HCX4 862 aa16.25■□□□□ 0.19
GTF3C4-201ENST00000372146 SCN3BQ9NY72 215 aa16.25■□□□□ 0.19
GTF3C4-201ENST00000372146 LRRIQ4A6NIV6 560 aa16.25■□□□□ 0.19
GTF3C4-201ENST00000372146 CCT3P49368 545 aaKnown RBP16.25■□□□□ 0.19
GTF3C4-201ENST00000372146 CDO1Q16878 200 aa16.25■□□□□ 0.19
GTF3C4-201ENST00000372146 SPATA21Q7Z572 469 aa16.25■□□□□ 0.19
GTF3C4-201ENST00000372146 VSTM4Q8IW00 320 aa16.25■□□□□ 0.19
GTF3C4-201ENST00000372146 BLIDQ8IZY5 108 aa16.25■□□□□ 0.19
GTF3C4-201ENST00000372146 RIN3Q8TB24 985 aa16.25■□□□□ 0.19
GTF3C4-201ENST00000372146 LARP4BQ92615 738 aaKnown RBP16.25■□□□□ 0.19
GTF3C4-201ENST00000372146 PSMC2P35998 433 aaKnown RBP16.25■□□□□ 0.19
GTF3C4-201ENST00000372146 CPXCR1Q8N123 301 aa16.25■□□□□ 0.19
GTF3C4-201ENST00000372146 ZNF473Q8WTR7 871 aaKnown RBP16.25■□□□□ 0.19
GTF3C4-201ENST00000372146 TNNQ9UQP3 1299 aa16.25■□□□□ 0.19
GTF3C4-201ENST00000372146 IL1RAPL1Q9NZN1 696 aa16.25■□□□□ 0.19
GTF3C4-201ENST00000372146 SELENONQ9NZV5 590 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms