RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 GBP3Q9H0R5 595 aa28.94■■■□□ 2.22
ATPAF1-202ENST00000371937 DHX33Q9H6R0 707 aaKnown RBP28.94■■■□□ 2.22
ATPAF1-202ENST00000371937 XPNPEP1Q9NQW7 623 aa28.94■■■□□ 2.22
ATPAF1-202ENST00000371937 TNPO2O14787 897 aaKnown RBP28.93■■■□□ 2.22
ATPAF1-202ENST00000371937 NKRFO15226 690 aaKnown RBP eCLIP28.93■■■□□ 2.22
ATPAF1-202ENST00000371937 RGS2P41220 211 aa28.93■■■□□ 2.22
ATPAF1-202ENST00000371937 MARSP56192 900 aaKnown RBP28.93■■■□□ 2.22
ATPAF1-202ENST00000371937 EMC2Q15006 297 aa28.93■■■□□ 2.22
ATPAF1-202ENST00000371937 MAN2A1Q16706 1144 aa28.93■■■□□ 2.22
ATPAF1-202ENST00000371937 PTPN21Q16825 1174 aa28.93■■■□□ 2.22
ATPAF1-202ENST00000371937 CCDC40Q4G0X9 1142 aa28.93■■■□□ 2.22
ATPAF1-202ENST00000371937 HAUS6Q7Z4H7 955 aa28.93■■■□□ 2.22
ATPAF1-202ENST00000371937 NTPCRQ9BSD7 190 aaKnown RBP28.93■■■□□ 2.22
ATPAF1-202ENST00000371937 ZMYM2Q9UBW7 1377 aa28.93■■■□□ 2.22
ATPAF1-202ENST00000371937 TGFB1I1O43294 461 aa28.92■■■□□ 2.22
ATPAF1-202ENST00000371937 ECM2O94769 699 aaPredicted RBP28.92■■■□□ 2.22
ATPAF1-202ENST00000371937 NR3C1P04150 777 aa28.92■■■□□ 2.22
ATPAF1-202ENST00000371937 GTF2BQ00403 316 aa28.92■■■□□ 2.22
ATPAF1-202ENST00000371937 TARBP2Q15633 366 aaKnown RBP28.92■■■□□ 2.22
ATPAF1-202ENST00000371937 DEFB115Q30KQ5 88 aa28.92■■■□□ 2.22
ATPAF1-202ENST00000371937 DUSP28Q4G0W2 176 aa28.92■■■□□ 2.22
ATPAF1-202ENST00000371937 SYCP3Q8IZU3 236 aa28.92■■■□□ 2.22
ATPAF1-202ENST00000371937 PPTC7Q8NI37 304 aa28.92■■■□□ 2.22
ATPAF1-202ENST00000371937 IFT74Q96LB3 600 aa28.92■■■□□ 2.22
ATPAF1-202ENST00000371937 ACCSQ96QU6 501 aa28.92■■■□□ 2.22
ATPAF1-202ENST00000371937 ZHX1Q9UKY1 873 aaPredicted RBP28.92■■■□□ 2.22
ATPAF1-202ENST00000371937 A0A1W2PQC6 194 aa28.92■■■□□ 2.22
ATPAF1-202ENST00000371937 NPTX2P47972 431 aa28.92■■■□□ 2.22
ATPAF1-202ENST00000371937 EXOC8Q8IYI6 725 aa28.92■■■□□ 2.22
ATPAF1-202ENST00000371937 ATP8B4Q8TF62 1192 aa28.92■■■□□ 2.22
ATPAF1-202ENST00000371937 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP28.92■■■□□ 2.22
ATPAF1-202ENST00000371937 CCDC169A6NNP5 214 aa28.91■■■□□ 2.22
ATPAF1-202ENST00000371937 ARID5BQ14865 1188 aa28.91■■■□□ 2.22
ATPAF1-202ENST00000371937 VWA3BQ502W6 1294 aa28.91■■■□□ 2.22
ATPAF1-202ENST00000371937 MIIPQ5JXC2 388 aa28.91■■■□□ 2.22
ATPAF1-202ENST00000371937 ARMCX5Q6P1M9 558 aa28.91■■■□□ 2.22
ATPAF1-202ENST00000371937 HVCN1Q96D96 273 aa28.91■■■□□ 2.22
ATPAF1-202ENST00000371937 CEP89Q96ST8 783 aa28.91■■■□□ 2.22
ATPAF1-202ENST00000371937 KMT5AQ9NQR1 393 aa28.91■■■□□ 2.22
ATPAF1-202ENST00000371937 CREBZFQ9NS37 354 aa28.91■■■□□ 2.22
ATPAF1-202ENST00000371937 RASSF10A6NK89 507 aa28.9■■■□□ 2.22
ATPAF1-202ENST00000371937 SLC16A4O15374 487 aa28.9■■■□□ 2.22
ATPAF1-202ENST00000371937 NRDCO43847 1150 aa28.9■■■□□ 2.22
ATPAF1-202ENST00000371937 ABCD1P33897 745 aa28.9■■■□□ 2.22
ATPAF1-202ENST00000371937 TBC1D8BQ0IIM8 1120 aa28.9■■■□□ 2.22
ATPAF1-202ENST00000371937 LRMPQ12912 555 aa28.9■■■□□ 2.22
ATPAF1-202ENST00000371937 FKBP15Q5T1M5 1219 aa28.9■■■□□ 2.22
ATPAF1-202ENST00000371937 OLFML2BQ68BL8 750 aa28.9■■■□□ 2.22
ATPAF1-202ENST00000371937 PPFIBP1Q86W92 1011 aa28.9■■■□□ 2.22
ATPAF1-202ENST00000371937 KSR1Q8IVT5 923 aa28.9■■■□□ 2.22
ATPAF1-202ENST00000371937 APBA2Q99767 749 aa28.9■■■□□ 2.22
ATPAF1-202ENST00000371937 CGNQ9P2M7 1197 aaKnown RBP28.9■■■□□ 2.22
ATPAF1-202ENST00000371937 GJD2Q9UKL4 321 aa28.9■■■□□ 2.22
ATPAF1-202ENST00000371937 H0YCG3 227 aa28.9■■■□□ 2.22
ATPAF1-202ENST00000371937 TRIM50Q86XT4 487 aa28.9■■■□□ 2.22
ATPAF1-202ENST00000371937 CAPNS2Q96L46 248 aa28.9■■■□□ 2.22
ATPAF1-202ENST00000371937 POLR3FQ9H1D9 316 aaPredicted RBP28.9■■■□□ 2.22
ATPAF1-202ENST00000371937 NDST4Q9H3R1 872 aa28.9■■■□□ 2.22
ATPAF1-202ENST00000371937 ERAP1Q9NZ08 941 aa28.9■■■□□ 2.22
ATPAF1-202ENST00000371937 DOCK3Q8IZD9 2030 aa28.89■■■□□ 2.22
ATPAF1-202ENST00000371937 SLC16A3O15427 465 aaKnown RBP28.89■■■□□ 2.22
ATPAF1-202ENST00000371937 SMPD1P17405 629 aa28.89■■■□□ 2.22
ATPAF1-202ENST00000371937 SCP2P22307 547 aa28.89■■■□□ 2.22
ATPAF1-202ENST00000371937 MARK3P27448 753 aa28.89■■■□□ 2.22
ATPAF1-202ENST00000371937 SNRPFP62306 86 aaKnown RBP28.89■■■□□ 2.22
ATPAF1-202ENST00000371937 TRIM14Q14142 442 aa28.89■■■□□ 2.22
ATPAF1-202ENST00000371937 GJC2Q5T442 439 aaPredicted RBP28.89■■■□□ 2.22
ATPAF1-202ENST00000371937 FRMD5Q7Z6J6 570 aa28.89■■■□□ 2.22
ATPAF1-202ENST00000371937 TMEM161BQ8NDZ6 487 aa28.89■■■□□ 2.22
ATPAF1-202ENST00000371937 EXOC7Q9UPT5 735 aa28.89■■■□□ 2.22
ATPAF1-202ENST00000371937 C11orf97A0A1B0GVM6 126 aaPredicted RBP28.88■■■□□ 2.21
ATPAF1-202ENST00000371937 PPFIA4O75335 1185 aa28.88■■■□□ 2.21
ATPAF1-202ENST00000371937 TPM1P09493 284 aa28.88■■■□□ 2.21
ATPAF1-202ENST00000371937 CYP2B6P20813 491 aa28.88■■■□□ 2.21
ATPAF1-202ENST00000371937 SOX10P56693 466 aa28.88■■■□□ 2.21
ATPAF1-202ENST00000371937 MYBPC2Q14324 1141 aa28.88■■■□□ 2.21
ATPAF1-202ENST00000371937 PLCB4Q15147 1175 aa28.88■■■□□ 2.21
ATPAF1-202ENST00000371937 AGPAT3Q9NRZ7 376 aa28.88■■■□□ 2.21
ATPAF1-202ENST00000371937 CLIC2O15247 247 aa28.87■■■□□ 2.21
ATPAF1-202ENST00000371937 MAFO75444 373 aaPredicted RBP28.87■■■□□ 2.21
ATPAF1-202ENST00000371937 PPP2R5AQ15172 486 aa28.87■■■□□ 2.21
ATPAF1-202ENST00000371937 TRIM59Q8IWR1 403 aa28.87■■■□□ 2.21
ATPAF1-202ENST00000371937 AFG1LQ8WV93 481 aa28.87■■■□□ 2.21
ATPAF1-202ENST00000371937 BSNDQ8WZ55 320 aa28.87■■■□□ 2.21
ATPAF1-202ENST00000371937 METTL14Q9HCE5 456 aaKnown RBP28.87■■■□□ 2.21
ATPAF1-202ENST00000371937 GAS2O43903 313 aaKnown RBP28.87■■■□□ 2.21
ATPAF1-202ENST00000371937 HBP1O60381 514 aa28.87■■■□□ 2.21
ATPAF1-202ENST00000371937 FCGRTP55899 365 aa28.87■■■□□ 2.21
ATPAF1-202ENST00000371937 TNFAIP2Q03169 654 aa28.87■■■□□ 2.21
ATPAF1-202ENST00000371937 FLRT1Q9NZU1 646 aa28.87■■■□□ 2.21
ATPAF1-202ENST00000371937 ARMCX3Q9UH62 379 aaPredicted RBP28.87■■■□□ 2.21
ATPAF1-202ENST00000371937 FAM184BQ9ULE4 1060 aa28.87■■■□□ 2.21
ATPAF1-202ENST00000371937 LGALS2P05162 132 aa28.86■■■□□ 2.21
ATPAF1-202ENST00000371937 EPB41P11171 864 aaKnown RBP28.86■■■□□ 2.21
ATPAF1-202ENST00000371937 ARL2P36404 184 aa28.86■■■□□ 2.21
ATPAF1-202ENST00000371937 SLC9A9Q8IVB4 645 aa28.86■■■□□ 2.21
ATPAF1-202ENST00000371937 TMEM174Q8WUU8 243 aa28.86■■■□□ 2.21
ATPAF1-202ENST00000371937 ERGIC2Q96RQ1 377 aa28.86■■■□□ 2.21
ATPAF1-202ENST00000371937 JPH2Q9BR39 696 aaPredicted RBP28.86■■■□□ 2.21
ATPAF1-202ENST00000371937 TBX20Q9UMR3 447 aa28.86■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms