RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 ANO9A1A5B4 782 aa16.24■□□□□ 0.19
COL5A1-201ENST00000371817 KRT16P08779 473 aa16.24■□□□□ 0.19
COL5A1-201ENST00000371817 TIMM10P62072 90 aa16.24■□□□□ 0.19
COL5A1-201ENST00000371817 ZNF483Q8TF39 744 aaPredicted RBP16.24■□□□□ 0.19
COL5A1-201ENST00000371817 NIP7Q9Y221 180 aaKnown RBP eCLIP16.24■□□□□ 0.19
COL5A1-201ENST00000371817 BAZ2BQ9UIF8 2168 aaKnown RBP16.24■□□□□ 0.19
COL5A1-201ENST00000371817 MED23Q9ULK4 1368 aa16.24■□□□□ 0.19
COL5A1-201ENST00000371817 PTPN21Q16825 1174 aa16.24■□□□□ 0.19
COL5A1-201ENST00000371817 MICU2Q8IYU8 434 aa16.24■□□□□ 0.19
COL5A1-201ENST00000371817 TTC8Q8TAM2 541 aa16.24■□□□□ 0.19
COL5A1-201ENST00000371817 NFKBIL1Q9UBC1 381 aaPredicted RBP16.24■□□□□ 0.19
COL5A1-201ENST00000371817 CFBP00751 764 aa16.24■□□□□ 0.19
COL5A1-201ENST00000371817 KRT6AP02538 564 aa16.24■□□□□ 0.19
COL5A1-201ENST00000371817 KRT6BP04259 564 aa16.24■□□□□ 0.19
COL5A1-201ENST00000371817 KRT6CP48668 564 aa16.24■□□□□ 0.19
COL5A1-201ENST00000371817 CLEC4MQ9H2X3 399 aaPredicted RBP16.24■□□□□ 0.19
COL5A1-201ENST00000371817 TRAPPC10P48553 1259 aa16.23■□□□□ 0.19
COL5A1-201ENST00000371817 KRT73Q86Y46 540 aa16.23■□□□□ 0.19
COL5A1-201ENST00000371817 ARL8AQ96BM9 186 aa16.23■□□□□ 0.19
COL5A1-201ENST00000371817 TRPC7Q9HCX4 862 aa16.23■□□□□ 0.19
COL5A1-201ENST00000371817 SAMSN1Q9NSI8 373 aaKnown RBP16.23■□□□□ 0.19
COL5A1-201ENST00000371817 ANGPT2O15123 496 aa16.23■□□□□ 0.19
COL5A1-201ENST00000371817 ATAD3BQ5T9A4 648 aa16.23■□□□□ 0.19
COL5A1-201ENST00000371817 TTC33Q6PID6 262 aaPredicted RBP16.23■□□□□ 0.19
COL5A1-201ENST00000371817 EPS8L2Q9H6S3 715 aa16.23■□□□□ 0.19
COL5A1-201ENST00000371817 SEL1LQ9UBV2 794 aa16.23■□□□□ 0.19
COL5A1-201ENST00000371817 CPSF3Q9UKF6 684 aaKnown RBP16.23■□□□□ 0.19
COL5A1-201ENST00000371817 FAM180AQ6UWF9 173 aa16.23■□□□□ 0.19
COL5A1-201ENST00000371817 RRM2BQ7LG56 351 aa16.23■□□□□ 0.19
COL5A1-201ENST00000371817 TRIM69Q86WT6 500 aa16.23■□□□□ 0.19
COL5A1-201ENST00000371817 ZNF233A6NK53 670 aa16.23■□□□□ 0.19
COL5A1-201ENST00000371817 SMAPO00193 183 aa16.23■□□□□ 0.19
COL5A1-201ENST00000371817 TCF3P15923 654 aa16.23■□□□□ 0.19
COL5A1-201ENST00000371817 KRT72Q14CN4 511 aa16.23■□□□□ 0.19
COL5A1-201ENST00000371817 ANKRD27Q96NW4 1050 aa16.23■□□□□ 0.19
COL5A1-201ENST00000371817 SNX24Q9Y343 169 aa16.23■□□□□ 0.19
COL5A1-201ENST00000371817 MIF4GDA9UHW6 222 aaKnown RBP16.23■□□□□ 0.19
COL5A1-201ENST00000371817 IRS4O14654 1257 aaPredicted RBP16.23■□□□□ 0.19
COL5A1-201ENST00000371817 TRIP4Q15650 581 aaPredicted RBP16.23■□□□□ 0.19
COL5A1-201ENST00000371817 BTN2A2Q8WVV5 523 aa16.23■□□□□ 0.19
COL5A1-201ENST00000371817 GCOM2Q9BZD3 368 aaPredicted RBP16.23■□□□□ 0.19
COL5A1-201ENST00000371817 ZSCAN20P17040 1043 aaPredicted RBP16.23■□□□□ 0.19
COL5A1-201ENST00000371817 KLHL12Q53G59 568 aa16.23■□□□□ 0.19
COL5A1-201ENST00000371817 CEP95Q96GE4 821 aa16.23■□□□□ 0.19
COL5A1-201ENST00000371817 RIMS2Q9UQ26 1411 aa16.23■□□□□ 0.19
COL5A1-201ENST00000371817 PSMC6P62333 389 aa16.23■□□□□ 0.19
COL5A1-201ENST00000371817 SCRN1Q12765 414 aa16.23■□□□□ 0.19
COL5A1-201ENST00000371817 KHDRBS2Q5VWX1 349 aaKnown RBP16.23■□□□□ 0.19
COL5A1-201ENST00000371817 KIAA0825Q8IV33 1275 aa16.23■□□□□ 0.19
COL5A1-201ENST00000371817 ADPGKQ9BRR6 497 aa16.23■□□□□ 0.19
COL5A1-201ENST00000371817 TBKBP1A7MCY6 615 aa16.22■□□□□ 0.19
COL5A1-201ENST00000371817 ZBTB24O43167 697 aaPredicted RBP16.22■□□□□ 0.19
COL5A1-201ENST00000371817 TRIM13O60858 407 aa16.22■□□□□ 0.19
COL5A1-201ENST00000371817 IL12RB1P42701 662 aa16.22■□□□□ 0.19
COL5A1-201ENST00000371817 AARS2Q5JTZ9 985 aaKnown RBP16.22■□□□□ 0.19
COL5A1-201ENST00000371817 HPS5Q9UPZ3 1129 aa16.22■□□□□ 0.19
COL5A1-201ENST00000371817 XAGE2Q96GT9 111 aa16.22■□□□□ 0.19
COL5A1-201ENST00000371817 CCT8L1PA6NM43 557 aa16.22■□□□□ 0.19
COL5A1-201ENST00000371817 BYSLQ13895 437 aaKnown RBP16.22■□□□□ 0.19
COL5A1-201ENST00000371817 UBE2TQ9NPD8 197 aaPredicted RBP16.22■□□□□ 0.19
COL5A1-201ENST00000371817 PICK1Q9NRD5 415 aa16.22■□□□□ 0.19
COL5A1-201ENST00000371817 USP14P54578 494 aa16.22■□□□□ 0.19
COL5A1-201ENST00000371817 CYB5D1Q6P9G0 228 aa16.22■□□□□ 0.19
COL5A1-201ENST00000371817 LRRC39Q96DD0 335 aa16.22■□□□□ 0.19
COL5A1-201ENST00000371817 TPD52L2O43399 206 aaKnown RBP16.22■□□□□ 0.19
COL5A1-201ENST00000371817 NUP62P37198 522 aaPredicted RBP16.22■□□□□ 0.19
COL5A1-201ENST00000371817 IYDQ6PHW0 289 aa16.22■□□□□ 0.19
COL5A1-201ENST00000371817 SPATA2Q9UM82 520 aa16.22■□□□□ 0.19
COL5A1-201ENST00000371817 GOLGA8HP0CJ92 632 aa16.22■□□□□ 0.19
COL5A1-201ENST00000371817 COPB2P35606 906 aa16.22■□□□□ 0.19
COL5A1-201ENST00000371817 CCDC144BQ3MJ40 725 aa16.22■□□□□ 0.19
COL5A1-201ENST00000371817 SNF8Q96H20 258 aa16.22■□□□□ 0.19
COL5A1-201ENST00000371817 MOV10L1Q9BXT6 1211 aaKnown RBP16.22■□□□□ 0.19
COL5A1-201ENST00000371817 PSTPIP2Q9H939 334 aa16.22■□□□□ 0.19
COL5A1-201ENST00000371817 KIAA1024Q9UPX6 916 aa16.22■□□□□ 0.19
COL5A1-201ENST00000371817 SEMA3EO15041 775 aa16.21■□□□□ 0.19
COL5A1-201ENST00000371817 SGSM1Q2NKQ1 1148 aa16.21■□□□□ 0.19
COL5A1-201ENST00000371817 AASDHQ4L235 1098 aaPredicted RBP16.21■□□□□ 0.19
COL5A1-201ENST00000371817 ARHGAP17Q68EM7 881 aa16.21■□□□□ 0.19
COL5A1-201ENST00000371817 FGD2Q7Z6J4 655 aa16.21■□□□□ 0.19
COL5A1-201ENST00000371817 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.21■□□□□ 0.19
COL5A1-201ENST00000371817 TUBA8Q9NY65 449 aaPredicted RBP16.21■□□□□ 0.19
COL5A1-201ENST00000371817 RGL1Q9NZL6 768 aa16.21■□□□□ 0.19
COL5A1-201ENST00000371817 KLHL20Q9Y2M5 609 aa16.21■□□□□ 0.19
COL5A1-201ENST00000371817 ZFYVE9O95405 1425 aa16.21■□□□□ 0.19
COL5A1-201ENST00000371817 ODR4Q5SWX8 454 aa16.21■□□□□ 0.19
COL5A1-201ENST00000371817 TSSK1BQ9BXA7 367 aa16.21■□□□□ 0.19
COL5A1-201ENST00000371817 HACD3Q9P035 362 aa16.21■□□□□ 0.19
COL5A1-201ENST00000371817 MAP3K5Q99683 1374 aa16.21■□□□□ 0.19
COL5A1-201ENST00000371817 ABCE1P61221 599 aaKnown RBP16.21■□□□□ 0.19
COL5A1-201ENST00000371817 WLSQ5T9L3 541 aa16.21■□□□□ 0.19
COL5A1-201ENST00000371817 BTN2A1Q7KYR7 527 aa16.21■□□□□ 0.19
COL5A1-201ENST00000371817 CYP26B1Q9NR63 512 aa16.21■□□□□ 0.19
COL5A1-201ENST00000371817 DKK3Q9UBP4 350 aa16.21■□□□□ 0.19
COL5A1-201ENST00000371817 GGT7Q9UJ14 662 aa16.21■□□□□ 0.19
COL5A1-201ENST00000371817 KPNA4O00629 521 aaPredicted RBP16.21■□□□□ 0.19
COL5A1-201ENST00000371817 TSPYL6Q8N831 410 aa16.21■□□□□ 0.19
COL5A1-201ENST00000371817 SMG5Q9UPR3 1016 aaKnown RBP16.21■□□□□ 0.19
COL5A1-201ENST00000371817 JAG2Q9Y219 1238 aa16.21■□□□□ 0.19
COL5A1-201ENST00000371817 GOLGA8SH3BPF8 625 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms