RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 YWHABP31946 246 aaKnown RBP15.84■□□□□ 0.13
NDC1-201ENST00000371429 EXOSC10Q01780 885 aaKnown RBP15.84■□□□□ 0.13
NDC1-201ENST00000371429 MAGED2Q9UNF1 606 aaPredicted RBP15.84■□□□□ 0.13
NDC1-201ENST00000371429 ECEL1O95672 775 aa15.84■□□□□ 0.13
NDC1-201ENST00000371429 GH1P01241 217 aa15.84■□□□□ 0.13
NDC1-201ENST00000371429 VAMP7P51809 220 aa15.84■□□□□ 0.13
NDC1-201ENST00000371429 SREBF2Q12772 1141 aa15.84■□□□□ 0.13
NDC1-201ENST00000371429 SMARCAD1Q9H4L7 1026 aa15.84■□□□□ 0.13
NDC1-201ENST00000371429 DCCP43146 1447 aa15.84■□□□□ 0.13
NDC1-201ENST00000371429 CPP00450 1065 aa15.84■□□□□ 0.13
NDC1-201ENST00000371429 HSPA6P17066 643 aa15.84■□□□□ 0.13
NDC1-201ENST00000371429 PRCPP42785 496 aa15.84■□□□□ 0.13
NDC1-201ENST00000371429 KCNH2Q12809 1159 aa15.84■□□□□ 0.13
NDC1-201ENST00000371429 MAPK8IP2Q13387 824 aaPredicted RBP15.84■□□□□ 0.13
NDC1-201ENST00000371429 PPP6R3Q5H9R7 873 aaPredicted RBP15.84■□□□□ 0.13
NDC1-201ENST00000371429 PRPF31Q8WWY3 499 aaKnown RBP15.84■□□□□ 0.13
NDC1-201ENST00000371429 ALDH8A1Q9H2A2 487 aaPredicted RBP15.84■□□□□ 0.13
NDC1-201ENST00000371429 PIDD1Q9HB75 910 aa15.84■□□□□ 0.13
NDC1-201ENST00000371429 POC1B-GALNT4F8VUJ3 575 aa15.83■□□□□ 0.13
NDC1-201ENST00000371429 HIP1RO75146 1068 aa15.83■□□□□ 0.13
NDC1-201ENST00000371429 NDUFA10O95299 355 aa15.83■□□□□ 0.13
NDC1-201ENST00000371429 EYA4O95677 639 aa15.83■□□□□ 0.13
NDC1-201ENST00000371429 CHGBP05060 677 aa15.83■□□□□ 0.13
NDC1-201ENST00000371429 ATP2C1P98194 919 aaPredicted RBP15.83■□□□□ 0.13
NDC1-201ENST00000371429 TOGARAM2Q6ZUX3 1019 aa15.83■□□□□ 0.13
NDC1-201ENST00000371429 KATNAL1Q9BW62 490 aa15.83■□□□□ 0.13
NDC1-201ENST00000371429 ZNF609O15014 1411 aa15.83■□□□□ 0.13
NDC1-201ENST00000371429 PDHBP11177 359 aa15.83■□□□□ 0.13
NDC1-201ENST00000371429 RFX5P48382 616 aaPredicted RBP15.83■□□□□ 0.13
NDC1-201ENST00000371429 RHOT2Q8IXI1 618 aa15.83■□□□□ 0.13
NDC1-201ENST00000371429 GDAP1Q8TB36 358 aa15.83■□□□□ 0.13
NDC1-201ENST00000371429 UBN1Q9NPG3 1134 aa15.83■□□□□ 0.13
NDC1-201ENST00000371429 RBAKQ9NYW8 714 aaPredicted RBP15.83■□□□□ 0.13
NDC1-201ENST00000371429 AGO2Q9UKV8 859 aaKnown RBP15.83■□□□□ 0.13
NDC1-201ENST00000371429 PIN4Q9Y237 131 aaKnown RBP15.83■□□□□ 0.13
NDC1-201ENST00000371429 SOWAHDA6NJG2 315 aa15.83■□□□□ 0.12
NDC1-201ENST00000371429 UBE2Q2LH0YL09 131 aa15.83■□□□□ 0.12
NDC1-201ENST00000371429 MOCS3O95396 460 aa15.83■□□□□ 0.12
NDC1-201ENST00000371429 RAPH1Q70E73 1250 aa15.83■□□□□ 0.12
NDC1-201ENST00000371429 IGDCC4Q8TDY8 1250 aa15.83■□□□□ 0.12
NDC1-201ENST00000371429 PPP1R13BQ96KQ4 1090 aa15.83■□□□□ 0.12
NDC1-201ENST00000371429 TUFT1Q9NNX1 390 aa15.83■□□□□ 0.12
NDC1-201ENST00000371429 SMYD2Q9NRG4 433 aa15.83■□□□□ 0.12
NDC1-201ENST00000371429 PCDHA13Q9Y5I0 950 aa15.83■□□□□ 0.12
NDC1-201ENST00000371429 S100BP04271 92 aaPredicted RBP15.83■□□□□ 0.12
NDC1-201ENST00000371429 NXNQ6DKJ4 435 aa15.83■□□□□ 0.12
NDC1-201ENST00000371429 KIF12Q96FN5 646 aa15.83■□□□□ 0.12
NDC1-201ENST00000371429 NUDT12Q9BQG2 462 aa15.83■□□□□ 0.12
NDC1-201ENST00000371429 ZWILCHQ9H900 591 aa15.83■□□□□ 0.12
NDC1-201ENST00000371429 SUCLA2Q9P2R7 463 aaPredicted RBP15.83■□□□□ 0.12
NDC1-201ENST00000371429 POLLQ9UGP5 575 aa15.83■□□□□ 0.12
NDC1-201ENST00000371429 CCDC160A6NGH7 325 aa15.82■□□□□ 0.12
NDC1-201ENST00000371429 DGAT1O75907 488 aa15.82■□□□□ 0.12
NDC1-201ENST00000371429 TBXAS1P24557 533 aaPredicted RBP15.82■□□□□ 0.12
NDC1-201ENST00000371429 PDIA5Q14554 519 aa15.82■□□□□ 0.12
NDC1-201ENST00000371429 SKIV2LQ15477 1246 aaKnown RBP15.82■□□□□ 0.12
NDC1-201ENST00000371429 SLC10A5Q5PT55 438 aa15.82■□□□□ 0.12
NDC1-201ENST00000371429 RNF219Q5W0B1 726 aaPredicted RBP15.82■□□□□ 0.12
NDC1-201ENST00000371429 BZW1Q7L1Q6 419 aaKnown RBP15.82■□□□□ 0.12
NDC1-201ENST00000371429 FAM217BQ9NTX9 383 aaPredicted RBP15.82■□□□□ 0.12
NDC1-201ENST00000371429 PPFIA4O75335 1185 aa15.82■□□□□ 0.12
NDC1-201ENST00000371429 ZBED1O96006 694 aa15.82■□□□□ 0.12
NDC1-201ENST00000371429 KLRK1P26718 216 aa15.82■□□□□ 0.12
NDC1-201ENST00000371429 RECQLP46063 649 aaPredicted RBP15.82■□□□□ 0.12
NDC1-201ENST00000371429 KRT39Q6A163 491 aa15.82■□□□□ 0.12
NDC1-201ENST00000371429 SCYL3Q8IZE3 742 aa15.82■□□□□ 0.12
NDC1-201ENST00000371429 ARHGEF2Q92974 986 aaKnown RBP15.82■□□□□ 0.12
NDC1-201ENST00000371429 ATG4CQ96DT6 458 aa15.82■□□□□ 0.12
NDC1-201ENST00000371429 NCAPGQ9BPX3 1015 aa15.82■□□□□ 0.12
NDC1-201ENST00000371429 FAM114A2Q9NRY5 505 aa15.82■□□□□ 0.12
NDC1-201ENST00000371429 PFASO15067 1338 aa15.82■□□□□ 0.12
NDC1-201ENST00000371429 CTSHP09668 335 aa15.82■□□□□ 0.12
NDC1-201ENST00000371429 NFKBIAP25963 317 aa15.82■□□□□ 0.12
NDC1-201ENST00000371429 NAALADL2Q58DX5 795 aa15.82■□□□□ 0.12
NDC1-201ENST00000371429 ARHGAP24Q8N264 748 aa15.82■□□□□ 0.12
NDC1-201ENST00000371429 MCUQ8NE86 351 aa15.82■□□□□ 0.12
NDC1-201ENST00000371429 CXCR5P32302 372 aa15.82■□□□□ 0.12
NDC1-201ENST00000371429 CDC42EP1Q00587 391 aa15.82■□□□□ 0.12
NDC1-201ENST00000371429 PASD1Q8IV76 773 aa15.82■□□□□ 0.12
NDC1-201ENST00000371429 GUF1Q8N442 669 aaKnown RBP15.82■□□□□ 0.12
NDC1-201ENST00000371429 PRMT6Q96LA8 375 aaPredicted RBP15.82■□□□□ 0.12
NDC1-201ENST00000371429 EPB41L4AQ9HCS5 686 aaPredicted RBP15.82■□□□□ 0.12
NDC1-201ENST00000371429 SRGNP10124 158 aa15.82■□□□□ 0.12
NDC1-201ENST00000371429 CPB1P15086 417 aa15.82■□□□□ 0.12
NDC1-201ENST00000371429 KCNJ6P48051 423 aa15.82■□□□□ 0.12
NDC1-201ENST00000371429 DUOXA2Q1HG44 320 aa15.82■□□□□ 0.12
NDC1-201ENST00000371429 MYLK4Q86YV6 388 aaPredicted RBP15.82■□□□□ 0.12
NDC1-201ENST00000371429 TTC39CQ8N584 583 aa15.82■□□□□ 0.12
NDC1-201ENST00000371429 CHST13Q8NET6 341 aa15.82■□□□□ 0.12
NDC1-201ENST00000371429 HSPH1Q92598 858 aa15.82■□□□□ 0.12
NDC1-201ENST00000371429 SH2D3AQ9BRG2 576 aa15.82■□□□□ 0.12
NDC1-201ENST00000371429 TRIM56Q9BRZ2 755 aaKnown RBP15.82■□□□□ 0.12
NDC1-201ENST00000371429 ADARB2Q9NS39 739 aaKnown RBP15.82■□□□□ 0.12
NDC1-201ENST00000371429 CNOT8Q9UFF9 292 aaKnown RBP15.82■□□□□ 0.12
NDC1-201ENST00000371429 PRKCBP05771 671 aa15.81■□□□□ 0.12
NDC1-201ENST00000371429 THOC5Q13769 683 aaKnown RBP15.81■□□□□ 0.12
NDC1-201ENST00000371429 MAP7Q14244 749 aa15.81■□□□□ 0.12
NDC1-201ENST00000371429 GPD1LQ8N335 351 aa15.81■□□□□ 0.12
NDC1-201ENST00000371429 SCFD2Q8WU76 684 aa15.81■□□□□ 0.12
NDC1-201ENST00000371429 PBKQ96KB5 322 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms