RNA–Protein interactions for RNA: ENST00000370096.7

COL11A1-203, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene COL11A1, Length 7,286 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-203ENST00000370096 MAGEF1Q9HAY2 307 aa11.84□□□□□ -0.51
COL11A1-203ENST00000370096 ZFYVE9O95405 1425 aa11.84□□□□□ -0.51
COL11A1-203ENST00000370096 UBA6A0AVT1 1052 aaPredicted RBP11.84□□□□□ -0.51
COL11A1-203ENST00000370096 STK25O00506 426 aa11.84□□□□□ -0.51
COL11A1-203ENST00000370096 MXI1P50539 228 aa11.84□□□□□ -0.51
COL11A1-203ENST00000370096 KDSRQ06136 332 aa11.84□□□□□ -0.51
COL11A1-203ENST00000370096 MKRN3Q13064 507 aaKnown RBP11.84□□□□□ -0.51
COL11A1-203ENST00000370096 CNGA3Q16281 694 aa11.84□□□□□ -0.51
COL11A1-203ENST00000370096 EAF2Q96CJ1 260 aaPredicted RBP11.84□□□□□ -0.51
COL11A1-203ENST00000370096 KLC4Q9NSK0 619 aa11.84□□□□□ -0.51
COL11A1-203ENST00000370096 ATP8B3O60423 1300 aa11.84□□□□□ -0.51
COL11A1-203ENST00000370096 ZCCHC17Q9NP64 241 aaKnown RBP11.84□□□□□ -0.51
COL11A1-203ENST00000370096 RNF14Q9UBS8 474 aa11.84□□□□□ -0.51
COL11A1-203ENST00000370096 TNRQ92752 1358 aa11.84□□□□□ -0.51
COL11A1-203ENST00000370096 ZNF263O14978 683 aa11.84□□□□□ -0.51
COL11A1-203ENST00000370096 ZBED6P86452 979 aa11.84□□□□□ -0.51
COL11A1-203ENST00000370096 TEDDM1Q5T9Z0 273 aa11.84□□□□□ -0.51
COL11A1-203ENST00000370096 RRM2BQ7LG56 351 aa11.84□□□□□ -0.51
COL11A1-203ENST00000370096 RNF25Q96BH1 459 aaPredicted RBP11.84□□□□□ -0.51
COL11A1-203ENST00000370096 PANX2Q96RD6 677 aa11.84□□□□□ -0.51
COL11A1-203ENST00000370096 NDST4Q9H3R1 872 aa11.84□□□□□ -0.51
COL11A1-203ENST00000370096 PCDHB6Q9Y5E3 794 aa11.84□□□□□ -0.51
COL11A1-203ENST00000370096 H0Y626 953 aa11.83□□□□□ -0.52
COL11A1-203ENST00000370096 TRIM16O95361 564 aa11.83□□□□□ -0.52
COL11A1-203ENST00000370096 RARS2Q5T160 578 aaKnown RBP11.83□□□□□ -0.52
COL11A1-203ENST00000370096 RBM46Q8TBY0 533 aaKnown RBP11.83□□□□□ -0.52
COL11A1-203ENST00000370096 IL17RAQ96F46 866 aa11.83□□□□□ -0.52
COL11A1-203ENST00000370096 SH3GL2Q99962 352 aa11.83□□□□□ -0.52
COL11A1-203ENST00000370096 MSTO1Q9BUK6 570 aa11.83□□□□□ -0.52
COL11A1-203ENST00000370096 SEL1LQ9UBV2 794 aa11.83□□□□□ -0.52
COL11A1-203ENST00000370096 BCS1LQ9Y276 419 aa11.83□□□□□ -0.52
COL11A1-203ENST00000370096 NESP48681 1621 aa11.83□□□□□ -0.52
COL11A1-203ENST00000370096 GOLGA8RI6L899 631 aa11.83□□□□□ -0.52
COL11A1-203ENST00000370096 PODXLO00592 558 aa11.83□□□□□ -0.52
COL11A1-203ENST00000370096 TMCC1O94876 653 aa11.83□□□□□ -0.52
COL11A1-203ENST00000370096 HOXA13P31271 388 aaPredicted RBP11.83□□□□□ -0.52
COL11A1-203ENST00000370096 LSG1Q9H089 658 aaKnown RBP11.83□□□□□ -0.52
COL11A1-203ENST00000370096 CUEDC2Q9H467 287 aa11.83□□□□□ -0.52
COL11A1-203ENST00000370096 HDAC6Q9UBN7 1215 aa11.83□□□□□ -0.52
COL11A1-203ENST00000370096 COPG1Q9Y678 874 aaKnown RBP11.83□□□□□ -0.52
COL11A1-203ENST00000370096 LAD1O00515 517 aa11.83□□□□□ -0.52
COL11A1-203ENST00000370096 RPS8P62241 208 aaKnown RBP11.83□□□□□ -0.52
COL11A1-203ENST00000370096 CHRNDQ07001 517 aa11.83□□□□□ -0.52
COL11A1-203ENST00000370096 NFRKBQ6P4R8 1299 aa11.83□□□□□ -0.52
COL11A1-203ENST00000370096 C1orf228Q6PIY5 440 aa11.83□□□□□ -0.52
COL11A1-203ENST00000370096 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.83□□□□□ -0.52
COL11A1-203ENST00000370096 NACC1Q96RE7 527 aa11.83□□□□□ -0.52
COL11A1-203ENST00000370096 SLITRK6Q9H5Y7 841 aa11.83□□□□□ -0.52
COL11A1-203ENST00000370096 PARVGQ9HBI0 331 aa11.83□□□□□ -0.52
COL11A1-203ENST00000370096 NDFIP2Q9NV92 336 aa11.83□□□□□ -0.52
COL11A1-203ENST00000370096 TLR7Q9NYK1 1049 aaKnown RBP11.83□□□□□ -0.52
COL11A1-203ENST00000370096 GPS1Q13098 491 aa11.83□□□□□ -0.52
COL11A1-203ENST00000370096 MYO1GB0I1T2 1018 aa11.83□□□□□ -0.52
COL11A1-203ENST00000370096 NEMP1O14524 444 aa11.83□□□□□ -0.52
COL11A1-203ENST00000370096 ZBTB22O15209 634 aa11.83□□□□□ -0.52
COL11A1-203ENST00000370096 ARIH2O95376 493 aa11.83□□□□□ -0.52
COL11A1-203ENST00000370096 FASTKD1Q53R41 847 aaKnown RBP11.83□□□□□ -0.52
COL11A1-203ENST00000370096 TEX2Q8IWB9 1127 aa11.83□□□□□ -0.52
COL11A1-203ENST00000370096 TMA16Q96EY4 203 aaKnown RBP11.83□□□□□ -0.52
COL11A1-203ENST00000370096 UNC45AQ9H3U1 944 aa11.83□□□□□ -0.52
COL11A1-203ENST00000370096 SETD1BQ9UPS6 1966 aaKnown RBP11.83□□□□□ -0.52
COL11A1-203ENST00000370096 A0A1W2PQ27 194 aa11.82□□□□□ -0.52
COL11A1-203ENST00000370096 A0A1W2PQ64 194 aa11.82□□□□□ -0.52
COL11A1-203ENST00000370096 A0A1W2PQD8 194 aa11.82□□□□□ -0.52
COL11A1-203ENST00000370096 COPB2P35606 906 aa11.82□□□□□ -0.52
COL11A1-203ENST00000370096 KRT72Q14CN4 511 aa11.82□□□□□ -0.52
COL11A1-203ENST00000370096 ALKBH5Q6P6C2 394 aaKnown RBP11.82□□□□□ -0.52
COL11A1-203ENST00000370096 GALNT4Q8N4A0 578 aa11.82□□□□□ -0.52
COL11A1-203ENST00000370096 STX19Q8N4C7 294 aa11.82□□□□□ -0.52
COL11A1-203ENST00000370096 SNRNP27Q8WVK2 155 aaKnown RBP11.82□□□□□ -0.52
COL11A1-203ENST00000370096 PHF21AQ96BD5 680 aa11.82□□□□□ -0.52
COL11A1-203ENST00000370096 AMNQ9BXJ7 453 aa11.82□□□□□ -0.52
COL11A1-203ENST00000370096 MRPL40Q9NQ50 206 aaKnown RBP11.82□□□□□ -0.52
COL11A1-203ENST00000370096 PCSK1NQ9UHG2 260 aa11.82□□□□□ -0.52
COL11A1-203ENST00000370096 HSPA1AP0DMV8 641 aaKnown RBP11.82□□□□□ -0.52
COL11A1-203ENST00000370096 HSPA1BP0DMV9 641 aaKnown RBP11.82□□□□□ -0.52
COL11A1-203ENST00000370096 CASP1P29466 404 aa11.82□□□□□ -0.52
COL11A1-203ENST00000370096 FBXW10Q5XX13 1052 aa11.82□□□□□ -0.52
COL11A1-203ENST00000370096 ZNF589Q86UQ0 364 aaPredicted RBP11.82□□□□□ -0.52
COL11A1-203ENST00000370096 SLC17A8Q8NDX2 589 aa11.82□□□□□ -0.52
COL11A1-203ENST00000370096 AP5M1Q9H0R1 490 aa11.82□□□□□ -0.52
COL11A1-203ENST00000370096 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.82□□□□□ -0.52
COL11A1-203ENST00000370096 IMPDH2P12268 514 aa11.82□□□□□ -0.52
COL11A1-203ENST00000370096 BRAFP15056 766 aa11.82□□□□□ -0.52
COL11A1-203ENST00000370096 SERPINB10P48595 397 aa11.82□□□□□ -0.52
COL11A1-203ENST00000370096 TMEM154Q6P9G4 183 aa11.82□□□□□ -0.52
COL11A1-203ENST00000370096 EMBQ6PCB8 327 aa11.82□□□□□ -0.52
COL11A1-203ENST00000370096 USP17L2Q6R6M4 530 aa11.82□□□□□ -0.52
COL11A1-203ENST00000370096 ZBED8Q8IZ13 594 aa11.82□□□□□ -0.52
COL11A1-203ENST00000370096 ZNF555Q8NEP9 628 aa11.82□□□□□ -0.52
COL11A1-203ENST00000370096 MEFVO15553 781 aaPredicted RBP11.82□□□□□ -0.52
COL11A1-203ENST00000370096 KCNQ3O43525 872 aa11.82□□□□□ -0.52
COL11A1-203ENST00000370096 CD2BP2O95400 341 aaKnown RBP11.82□□□□□ -0.52
COL11A1-203ENST00000370096 SLC9A1P19634 815 aa11.82□□□□□ -0.52
COL11A1-203ENST00000370096 IL10P22301 178 aa11.82□□□□□ -0.52
COL11A1-203ENST00000370096 PHKA1P46020 1223 aa11.82□□□□□ -0.52
COL11A1-203ENST00000370096 PEX3P56589 373 aa11.82□□□□□ -0.52
COL11A1-203ENST00000370096 GUCY1A3Q02108 690 aa11.82□□□□□ -0.52
COL11A1-203ENST00000370096 PDIA2Q13087 525 aaKnown RBP11.82□□□□□ -0.52
COL11A1-203ENST00000370096 PSMD2Q13200 908 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms