RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 NLRP4Q96MN2 994 aa13.29□□□□□ -0.28
HCFC1-202ENST00000369984 ZNF212Q9UDV6 495 aa13.29□□□□□ -0.28
HCFC1-202ENST00000369984 ZSCAN9O15535 394 aaPredicted RBP13.28□□□□□ -0.28
HCFC1-202ENST00000369984 DPY19L2Q6NUT2 758 aa13.28□□□□□ -0.28
HCFC1-202ENST00000369984 RASSF3Q86WH2 238 aa13.28□□□□□ -0.28
HCFC1-202ENST00000369984 TAGAPQ8N103 731 aa13.28□□□□□ -0.28
HCFC1-202ENST00000369984 NSUN7Q8NE18 718 aaKnown RBP13.28□□□□□ -0.28
HCFC1-202ENST00000369984 OR9Q1Q8NGQ5 310 aa13.28□□□□□ -0.28
HCFC1-202ENST00000369984 CDHR1Q96JP9 859 aa13.28□□□□□ -0.28
HCFC1-202ENST00000369984 PTPRKQ15262 1439 aa13.28□□□□□ -0.28
HCFC1-202ENST00000369984 SLC16A2P36021 539 aa13.28□□□□□ -0.28
HCFC1-202ENST00000369984 CAV1Q03135 178 aa13.28□□□□□ -0.28
HCFC1-202ENST00000369984 KRT31Q15323 416 aa13.28□□□□□ -0.28
HCFC1-202ENST00000369984 MTERF2Q49AM1 385 aa13.28□□□□□ -0.28
HCFC1-202ENST00000369984 RARS2Q5T160 578 aaKnown RBP13.28□□□□□ -0.28
HCFC1-202ENST00000369984 TRAF7Q6Q0C0 670 aa13.28□□□□□ -0.28
HCFC1-202ENST00000369984 ANO5Q75V66 913 aa13.28□□□□□ -0.28
HCFC1-202ENST00000369984 MB21D1Q8N884 522 aa13.28□□□□□ -0.28
HCFC1-202ENST00000369984 GANCQ8TET4 914 aa13.28□□□□□ -0.28
HCFC1-202ENST00000369984 KRT38O76015 456 aa13.28□□□□□ -0.28
HCFC1-202ENST00000369984 PHKA1P46020 1223 aa13.28□□□□□ -0.28
HCFC1-202ENST00000369984 MXD4Q14582 209 aaPredicted RBP13.28□□□□□ -0.28
HCFC1-202ENST00000369984 MAP4K1Q92918 833 aa13.28□□□□□ -0.28
HCFC1-202ENST00000369984 OLFM3Q96PB7 478 aa13.28□□□□□ -0.28
HCFC1-202ENST00000369984 HOXA7P31268 230 aaPredicted RBP13.28□□□□□ -0.28
HCFC1-202ENST00000369984 SERPINB10P48595 397 aa13.28□□□□□ -0.28
HCFC1-202ENST00000369984 ALCAMQ13740 583 aa13.28□□□□□ -0.28
HCFC1-202ENST00000369984 STX19Q8N4C7 294 aa13.28□□□□□ -0.28
HCFC1-202ENST00000369984 BTBD6Q96KE9 485 aa13.28□□□□□ -0.28
HCFC1-202ENST00000369984 CALR3Q96L12 384 aaKnown RBP13.28□□□□□ -0.28
HCFC1-202ENST00000369984 GREM2Q9H772 168 aa13.28□□□□□ -0.28
HCFC1-202ENST00000369984 DONSONQ9NYP3 566 aa13.28□□□□□ -0.28
HCFC1-202ENST00000369984 HPCAL4Q9UM19 191 aa13.28□□□□□ -0.28
HCFC1-202ENST00000369984 GMNCA6NCL1 334 aa13.28□□□□□ -0.28
HCFC1-202ENST00000369984 E5RI56 91 aa13.28□□□□□ -0.28
HCFC1-202ENST00000369984 CHUKO15111 745 aa13.28□□□□□ -0.28
HCFC1-202ENST00000369984 MLXIPLQ9NP71 852 aa13.28□□□□□ -0.28
HCFC1-202ENST00000369984 NDE1Q9NXR1 346 aa13.28□□□□□ -0.28
HCFC1-202ENST00000369984 ARHGAP10A1A4S6 786 aa13.28□□□□□ -0.28
HCFC1-202ENST00000369984 SYNDIG1LA6NDD5 238 aa13.28□□□□□ -0.28
HCFC1-202ENST00000369984 EIF4E1BA6NMX2 242 aaKnown RBP13.28□□□□□ -0.28
HCFC1-202ENST00000369984 CCDC188H7C350 402 aa13.28□□□□□ -0.28
HCFC1-202ENST00000369984 DAB1O75553 588 aa13.28□□□□□ -0.28
HCFC1-202ENST00000369984 ATP10BO94823 1461 aa13.28□□□□□ -0.28
HCFC1-202ENST00000369984 ZMYM1Q5SVZ6 1142 aa13.28□□□□□ -0.28
HCFC1-202ENST00000369984 PATL1Q86TB9 770 aaKnown RBP13.28□□□□□ -0.28
HCFC1-202ENST00000369984 PASD1Q8IV76 773 aa13.28□□□□□ -0.28
HCFC1-202ENST00000369984 MSTO1Q9BUK6 570 aa13.28□□□□□ -0.28
HCFC1-202ENST00000369984 ABHD10Q9NUJ1 306 aa13.28□□□□□ -0.28
HCFC1-202ENST00000369984 PSAPP07602 524 aa13.28□□□□□ -0.28
HCFC1-202ENST00000369984 CDC25AP30304 524 aa13.28□□□□□ -0.28
HCFC1-202ENST00000369984 SLC13A1Q9BZW2 595 aa13.28□□□□□ -0.28
HCFC1-202ENST00000369984 FAM96AQ9H5X1 160 aa13.28□□□□□ -0.28
HCFC1-202ENST00000369984 CYP26B1Q9NR63 512 aa13.28□□□□□ -0.28
HCFC1-202ENST00000369984 ZNF589Q86UQ0 364 aaPredicted RBP13.27□□□□□ -0.28
HCFC1-202ENST00000369984 LINC00301Q8NCQ3 95 aa13.27□□□□□ -0.28
HCFC1-202ENST00000369984 PDCD6IPQ8WUM4 868 aaKnown RBP13.27□□□□□ -0.28
HCFC1-202ENST00000369984 ADAM21Q9UKJ8 722 aa13.27□□□□□ -0.28
HCFC1-202ENST00000369984 BAZ2BQ9UIF8 2168 aaKnown RBP13.27□□□□□ -0.28
HCFC1-202ENST00000369984 CTIFO43310 598 aaKnown RBP13.27□□□□□ -0.28
HCFC1-202ENST00000369984 OSBPP22059 807 aa13.27□□□□□ -0.28
HCFC1-202ENST00000369984 CNGA3Q16281 694 aa13.27□□□□□ -0.28
HCFC1-202ENST00000369984 ATP11BQ9Y2G3 1177 aa13.27□□□□□ -0.28
HCFC1-202ENST00000369984 MAP3K10Q02779 954 aa13.27□□□□□ -0.29
HCFC1-202ENST00000369984 NPC1L1Q9UHC9 1359 aa13.27□□□□□ -0.29
HCFC1-202ENST00000369984 PJA2O43164 708 aa13.27□□□□□ -0.29
HCFC1-202ENST00000369984 C16orf72Q14CZ0 275 aa13.27□□□□□ -0.29
HCFC1-202ENST00000369984 CDC37Q16543 378 aaPredicted RBP13.27□□□□□ -0.29
HCFC1-202ENST00000369984 PARP9Q8IXQ6 854 aa13.27□□□□□ -0.29
HCFC1-202ENST00000369984 ATP6V0A4Q9HBG4 840 aa13.27□□□□□ -0.29
HCFC1-202ENST00000369984 ARHGAP26Q9UNA1 814 aa13.27□□□□□ -0.29
HCFC1-202ENST00000369984 ABCC10Q5T3U5 1492 aa13.27□□□□□ -0.29
HCFC1-202ENST00000369984 KAT6AQ92794 2004 aa13.27□□□□□ -0.29
HCFC1-202ENST00000369984 PDE8BO95263 885 aa13.27□□□□□ -0.29
HCFC1-202ENST00000369984 APOA1P02647 267 aa13.27□□□□□ -0.29
HCFC1-202ENST00000369984 SCG3Q8WXD2 468 aaKnown RBP13.27□□□□□ -0.29
HCFC1-202ENST00000369984 OTULINQ96BN8 352 aa13.27□□□□□ -0.29
HCFC1-202ENST00000369984 COA7Q96BR5 231 aa13.27□□□□□ -0.29
HCFC1-202ENST00000369984 RBM41Q96IZ5 413 aaKnown RBP13.27□□□□□ -0.29
HCFC1-202ENST00000369984 FAM161BQ96MY7 647 aa13.27□□□□□ -0.29
HCFC1-202ENST00000369984 PRR23D1E9PI22 279 aaPredicted RBP13.27□□□□□ -0.29
HCFC1-202ENST00000369984 K7ERI5 159 aa13.27□□□□□ -0.29
HCFC1-202ENST00000369984 PRR23D2P0DMB1 279 aaPredicted RBP13.27□□□□□ -0.29
HCFC1-202ENST00000369984 PPP2R2AP63151 447 aa13.27□□□□□ -0.29
HCFC1-202ENST00000369984 KLHL38Q2WGJ6 581 aa13.27□□□□□ -0.29
HCFC1-202ENST00000369984 RFX8Q6ZV50 586 aa13.27□□□□□ -0.29
HCFC1-202ENST00000369984 CCDC17Q96LX7 622 aa13.27□□□□□ -0.29
HCFC1-202ENST00000369984 TRIM45Q9H8W5 580 aaPredicted RBP13.27□□□□□ -0.29
HCFC1-202ENST00000369984 NGRNQ9NPE2 291 aaKnown RBP13.27□□□□□ -0.29
HCFC1-202ENST00000369984 SHANK2Q9UPX8 1470 aa13.26□□□□□ -0.29
HCFC1-202ENST00000369984 LAMC1P11047 1609 aa13.26□□□□□ -0.29
HCFC1-202ENST00000369984 MFAP3LO75121 409 aa13.26□□□□□ -0.29
HCFC1-202ENST00000369984 VCAM1P19320 739 aa13.26□□□□□ -0.29
HCFC1-202ENST00000369984 KIAA1755Q5JYT7 1200 aa13.26□□□□□ -0.29
HCFC1-202ENST00000369984 HDDC2Q7Z4H3 204 aa13.26□□□□□ -0.29
HCFC1-202ENST00000369984 B4GALNT2Q8NHY0 566 aa13.26□□□□□ -0.29
HCFC1-202ENST00000369984 ADAMTS1Q9UHI8 967 aa13.26□□□□□ -0.29
HCFC1-202ENST00000369984 CCNA1P78396 465 aa13.26□□□□□ -0.29
HCFC1-202ENST00000369984 ARHGEF1Q92888 912 aaKnown RBP13.26□□□□□ -0.29
HCFC1-202ENST00000369984 GCOM2Q9BZD3 368 aaPredicted RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms