RNA–Protein interactions for RNA: ENST00000369763.4

LRIF1-201, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene LRIF1, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-201ENST00000369763 TNFRSF8P28908 595 aa11.82□□□□□ -0.52
LRIF1-201ENST00000369763 ECE1P42892 770 aa11.82□□□□□ -0.52
LRIF1-201ENST00000369763 DLG4P78352 724 aa11.82□□□□□ -0.52
LRIF1-201ENST00000369763 CCDC13Q8IYE1 715 aa11.82□□□□□ -0.52
LRIF1-201ENST00000369763 CCDC26Q8TAB7 109 aa11.82□□□□□ -0.52
LRIF1-201ENST00000369763 RAPGEF5Q92565 580 aa11.82□□□□□ -0.52
LRIF1-201ENST00000369763 ALG3Q92685 438 aa11.82□□□□□ -0.52
LRIF1-201ENST00000369763 KAT5Q92993 513 aa11.82□□□□□ -0.52
LRIF1-201ENST00000369763 LENG9Q96B70 501 aa11.82□□□□□ -0.52
LRIF1-201ENST00000369763 FMO2Q99518 471 aa11.82□□□□□ -0.52
LRIF1-201ENST00000369763 TYW1Q9NV66 732 aaKnown RBP11.82□□□□□ -0.52
LRIF1-201ENST00000369763 LOC102724159A0A0B4J2E5 919 aa11.82□□□□□ -0.52
LRIF1-201ENST00000369763 GOLGA8IPA6NC78 632 aa11.82□□□□□ -0.52
LRIF1-201ENST00000369763 GMNCA6NCL1 334 aa11.82□□□□□ -0.52
LRIF1-201ENST00000369763 GOLGA8JA6NMD2 632 aa11.82□□□□□ -0.52
LRIF1-201ENST00000369763 FOXN3O00409 490 aaPredicted RBP11.82□□□□□ -0.52
LRIF1-201ENST00000369763 CTNND1O60716 968 aaKnown RBP11.82□□□□□ -0.52
LRIF1-201ENST00000369763 CRKP46108 304 aa11.82□□□□□ -0.52
LRIF1-201ENST00000369763 PWP2Q15269 919 aaKnown RBP11.82□□□□□ -0.52
LRIF1-201ENST00000369763 E2F5Q15329 346 aa11.82□□□□□ -0.52
LRIF1-201ENST00000369763 TMC3Q7Z5M5 1100 aa11.82□□□□□ -0.52
LRIF1-201ENST00000369763 FAM178BQ8IXR5 827 aa11.82□□□□□ -0.52
LRIF1-201ENST00000369763 FBXO25Q8TCJ0 367 aa11.82□□□□□ -0.52
LRIF1-201ENST00000369763 TDRD3Q9H7E2 651 aaKnown RBP11.82□□□□□ -0.52
LRIF1-201ENST00000369763 PLCB1Q9NQ66 1216 aa11.82□□□□□ -0.52
LRIF1-201ENST00000369763 TMEM59LQ9UK28 342 aa11.82□□□□□ -0.52
LRIF1-201ENST00000369763 H0YGN5 161 aa11.81□□□□□ -0.52
LRIF1-201ENST00000369763 OPLAHO14841 1288 aa11.81□□□□□ -0.52
LRIF1-201ENST00000369763 FAM107AO95990 144 aa11.81□□□□□ -0.52
LRIF1-201ENST00000369763 GCLMP48507 274 aa11.81□□□□□ -0.52
LRIF1-201ENST00000369763 VPS41P49754 854 aa11.81□□□□□ -0.52
LRIF1-201ENST00000369763 DR1Q01658 176 aa11.81□□□□□ -0.52
LRIF1-201ENST00000369763 LRCH2Q5VUJ6 765 aa11.81□□□□□ -0.52
LRIF1-201ENST00000369763 DPY19L2P1Q6NXN4 242 aa11.81□□□□□ -0.52
LRIF1-201ENST00000369763 ACTRT1Q8TDG2 376 aa11.81□□□□□ -0.52
LRIF1-201ENST00000369763 FAM163AQ96GL9 167 aaPredicted RBP11.81□□□□□ -0.52
LRIF1-201ENST00000369763 UBE2TQ9NPD8 197 aaPredicted RBP11.81□□□□□ -0.52
LRIF1-201ENST00000369763 HAUS2Q9NVX0 235 aa11.81□□□□□ -0.52
LRIF1-201ENST00000369763 USP21Q9UK80 565 aa11.81□□□□□ -0.52
LRIF1-201ENST00000369763 COG5Q9UP83 839 aa11.81□□□□□ -0.52
LRIF1-201ENST00000369763 TRAF3IP3Q9Y228 551 aa11.81□□□□□ -0.52
LRIF1-201ENST00000369763 NFS1Q9Y697 457 aa11.81□□□□□ -0.52
LRIF1-201ENST00000369763 COL16A1Q07092 1604 aaPredicted RBP11.81□□□□□ -0.52
LRIF1-201ENST00000369763 F8VZ95 297 aa11.81□□□□□ -0.52
LRIF1-201ENST00000369763 PDXKO00764 312 aa11.81□□□□□ -0.52
LRIF1-201ENST00000369763 PPP1R12BO60237 982 aaPredicted RBP11.81□□□□□ -0.52
LRIF1-201ENST00000369763 BBOX1O75936 387 aa11.81□□□□□ -0.52
LRIF1-201ENST00000369763 PPP2R2AP63151 447 aa11.81□□□□□ -0.52
LRIF1-201ENST00000369763 IFI35P80217 286 aaPredicted RBP11.81□□□□□ -0.52
LRIF1-201ENST00000369763 CUL1Q13616 776 aa11.81□□□□□ -0.52
LRIF1-201ENST00000369763 LRRC14Q15048 493 aa11.81□□□□□ -0.52
LRIF1-201ENST00000369763 C2CD6Q53TS8 623 aa11.81□□□□□ -0.52
LRIF1-201ENST00000369763 MCTP2Q6DN12 878 aa11.81□□□□□ -0.52
LRIF1-201ENST00000369763 POP1Q99575 1024 aaKnown RBP11.81□□□□□ -0.52
LRIF1-201ENST00000369763 WRAP73Q9P2S5 460 aaPredicted RBP11.81□□□□□ -0.52
LRIF1-201ENST00000369763 CD2APQ9Y5K6 639 aa11.81□□□□□ -0.52
LRIF1-201ENST00000369763 PSMC2P35998 433 aaKnown RBP11.81□□□□□ -0.52
LRIF1-201ENST00000369763 SNX1Q13596 522 aa11.81□□□□□ -0.52
LRIF1-201ENST00000369763 TRIP13Q15645 432 aaPredicted RBP11.81□□□□□ -0.52
LRIF1-201ENST00000369763 MICALCLQ6ZW33 695 aa11.81□□□□□ -0.52
LRIF1-201ENST00000369763 HS2ST1Q7LGA3 356 aa11.81□□□□□ -0.52
LRIF1-201ENST00000369763 SIAH1Q8IUQ4 282 aa11.81□□□□□ -0.52
LRIF1-201ENST00000369763 LMBR1Q8WVP7 490 aa11.81□□□□□ -0.52
LRIF1-201ENST00000369763 MYH7BA7E2Y1 1941 aa11.81□□□□□ -0.52
LRIF1-201ENST00000369763 TNRC6CQ9HCJ0 1690 aaKnown RBP11.81□□□□□ -0.52
LRIF1-201ENST00000369763 TCRBV7S2A1N4TA0A589 114 aa11.8□□□□□ -0.52
LRIF1-201ENST00000369763 SOX5P35711 763 aa11.8□□□□□ -0.52
LRIF1-201ENST00000369763 FMO5P49326 533 aa11.8□□□□□ -0.52
LRIF1-201ENST00000369763 MARSP56192 900 aaKnown RBP11.8□□□□□ -0.52
LRIF1-201ENST00000369763 HYIQ5T013 277 aa11.8□□□□□ -0.52
LRIF1-201ENST00000369763 PPP4R3CPQ6ZMV5 832 aa11.8□□□□□ -0.52
LRIF1-201ENST00000369763 CCDC127Q96BQ5 260 aa11.8□□□□□ -0.52
LRIF1-201ENST00000369763 FAM118BQ9BPY3 351 aa11.8□□□□□ -0.52
LRIF1-201ENST00000369763 MTFR1LQ9H019 292 aa11.8□□□□□ -0.52
LRIF1-201ENST00000369763 DBR1Q9UK59 544 aaKnown RBP11.8□□□□□ -0.52
LRIF1-201ENST00000369763 FRMD4BQ9Y2L6 1034 aa11.8□□□□□ -0.52
LRIF1-201ENST00000369763 BZW2Q9Y6E2 419 aaKnown RBP11.8□□□□□ -0.52
LRIF1-201ENST00000369763 DNM1LO00429 736 aa11.8□□□□□ -0.52
LRIF1-201ENST00000369763 ECM2O94769 699 aaPredicted RBP11.8□□□□□ -0.52
LRIF1-201ENST00000369763 SLC29A2Q14542 456 aa11.8□□□□□ -0.52
LRIF1-201ENST00000369763 PHLDB3Q6NSJ2 640 aa11.8□□□□□ -0.52
LRIF1-201ENST00000369763 PPP1R18Q6NYC8 613 aa11.8□□□□□ -0.52
LRIF1-201ENST00000369763 MREGQ8N565 214 aa11.8□□□□□ -0.52
LRIF1-201ENST00000369763 RUBCNQ92622 972 aa11.8□□□□□ -0.52
LRIF1-201ENST00000369763 SEC16BQ96JE7 1060 aa11.8□□□□□ -0.52
LRIF1-201ENST00000369763 OSBPL7Q9BZF2 842 aa11.8□□□□□ -0.52
LRIF1-201ENST00000369763 SEMA4AQ9H3S1 761 aa11.8□□□□□ -0.52
LRIF1-201ENST00000369763 AZI2Q9H6S1 392 aa11.8□□□□□ -0.52
LRIF1-201ENST00000369763 DAAM1Q9Y4D1 1078 aa11.8□□□□□ -0.52
LRIF1-201ENST00000369763 A0A1W2PRG0 241 aa11.8□□□□□ -0.52
LRIF1-201ENST00000369763 FTLP02792 175 aaPredicted RBP11.8□□□□□ -0.52
LRIF1-201ENST00000369763 NOVP48745 357 aa11.8□□□□□ -0.52
LRIF1-201ENST00000369763 CDR1P51861 262 aa11.8□□□□□ -0.52
LRIF1-201ENST00000369763 IRX3P78415 501 aaPredicted RBP11.8□□□□□ -0.52
LRIF1-201ENST00000369763 SETQ01105 290 aaPredicted RBP11.8□□□□□ -0.52
LRIF1-201ENST00000369763 ABCB5Q2M3G0 1257 aa11.8□□□□□ -0.52
LRIF1-201ENST00000369763 EPC2Q52LR7 807 aa11.8□□□□□ -0.52
LRIF1-201ENST00000369763 RUFY4Q6ZNE9 571 aa11.8□□□□□ -0.52
LRIF1-201ENST00000369763 SH3BP5LQ7L8J4 393 aa11.8□□□□□ -0.52
LRIF1-201ENST00000369763 ARFGAP2Q8N6H7 521 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms