RNA–Protein interactions for RNA: ENST00000369089.3

PRDM1-201, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 4,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-201ENST00000369089 GPCPD1Q9NPB8 672 aa11.14□□□□□ -0.63
PRDM1-201ENST00000369089 ITIH6Q6UXX5 1313 aa11.14□□□□□ -0.63
PRDM1-201ENST00000369089 PCDH11XQ9BZA7 1347 aa11.14□□□□□ -0.63
PRDM1-201ENST00000369089 PCDH11YQ9BZA8 1340 aa11.14□□□□□ -0.63
PRDM1-201ENST00000369089 TET3O43151 1660 aa11.14□□□□□ -0.63
PRDM1-201ENST00000369089 DNM1LO00429 736 aa11.14□□□□□ -0.63
PRDM1-201ENST00000369089 STAM2O75886 525 aa11.14□□□□□ -0.63
PRDM1-201ENST00000369089 CCR3P51677 355 aa11.14□□□□□ -0.63
PRDM1-201ENST00000369089 CLEC4GQ6UXB4 293 aa11.14□□□□□ -0.63
PRDM1-201ENST00000369089 STAP2Q9UGK3 403 aa11.14□□□□□ -0.63
PRDM1-201ENST00000369089 TEKT2Q9UIF3 430 aa11.14□□□□□ -0.63
PRDM1-201ENST00000369089 ASMTLO95671 621 aa11.13□□□□□ -0.63
PRDM1-201ENST00000369089 FOSL1P15407 271 aa11.13□□□□□ -0.63
PRDM1-201ENST00000369089 HOXD12P35452 270 aa11.13□□□□□ -0.63
PRDM1-201ENST00000369089 EIF4A1P60842 406 aaKnown RBP11.13□□□□□ -0.63
PRDM1-201ENST00000369089 RGS21Q2M5E4 152 aa11.13□□□□□ -0.63
PRDM1-201ENST00000369089 CHST3Q7LGC8 479 aa11.13□□□□□ -0.63
PRDM1-201ENST00000369089 GPIHBP1Q8IV16 184 aa11.13□□□□□ -0.63
PRDM1-201ENST00000369089 SEPT8Q92599 483 aa11.13□□□□□ -0.63
PRDM1-201ENST00000369089 COX4I2Q96KJ9 171 aa11.13□□□□□ -0.63
PRDM1-201ENST00000369089 SERPINI1Q99574 410 aa11.13□□□□□ -0.63
PRDM1-201ENST00000369089 PHF23Q9BUL5 403 aaPredicted RBP11.13□□□□□ -0.63
PRDM1-201ENST00000369089 UBE2OQ9C0C9 1292 aaKnown RBP11.13□□□□□ -0.63
PRDM1-201ENST00000369089 IFT122Q9HBG6 1241 aa11.13□□□□□ -0.63
PRDM1-201ENST00000369089 BTG4Q9NY30 223 aa11.13□□□□□ -0.63
PRDM1-201ENST00000369089 TELO2Q9Y4R8 837 aa11.13□□□□□ -0.63
PRDM1-201ENST00000369089 PRR36Q9H6K5 1346 aa11.13□□□□□ -0.63
PRDM1-201ENST00000369089 GOLGA8QA0A0J9YX86 632 aa11.13□□□□□ -0.63
PRDM1-201ENST00000369089 GOLGA8OA6NCC3 632 aa11.13□□□□□ -0.63
PRDM1-201ENST00000369089 UBAP1LF5GYI3 381 aa11.13□□□□□ -0.63
PRDM1-201ENST00000369089 GOLGA8NF8WBI6 632 aa11.13□□□□□ -0.63
PRDM1-201ENST00000369089 GOLGA8RI6L899 631 aa11.13□□□□□ -0.63
PRDM1-201ENST00000369089 ADCY6O43306 1168 aa11.13□□□□□ -0.63
PRDM1-201ENST00000369089 HSD17B3P37058 310 aa11.13□□□□□ -0.63
PRDM1-201ENST00000369089 HORMAD1Q86X24 394 aa11.13□□□□□ -0.63
PRDM1-201ENST00000369089 RNF169Q8NCN4 708 aa11.13□□□□□ -0.63
PRDM1-201ENST00000369089 ZNF570Q96NI8 536 aa11.13□□□□□ -0.63
PRDM1-201ENST00000369089 CORO1BQ9BR76 489 aa11.13□□□□□ -0.63
PRDM1-201ENST00000369089 CCSER2Q9H7U1 834 aa11.13□□□□□ -0.63
PRDM1-201ENST00000369089 TRPC7Q9HCX4 862 aa11.13□□□□□ -0.63
PRDM1-201ENST00000369089 ZNF212Q9UDV6 495 aa11.13□□□□□ -0.63
PRDM1-201ENST00000369089 CCDC194A0A1B0GVG4 234 aa11.13□□□□□ -0.63
PRDM1-201ENST00000369089 RANBP6O60518 1105 aaKnown RBP11.13□□□□□ -0.63
PRDM1-201ENST00000369089 GFPT2O94808 682 aa11.13□□□□□ -0.63
PRDM1-201ENST00000369089 TPPPO94811 219 aa11.13□□□□□ -0.63
PRDM1-201ENST00000369089 UQCRFS1P1P0C7P4 283 aa11.13□□□□□ -0.63
PRDM1-201ENST00000369089 MYCLP1P12525 358 aaPredicted RBP11.13□□□□□ -0.63
PRDM1-201ENST00000369089 CA4P22748 312 aa11.13□□□□□ -0.63
PRDM1-201ENST00000369089 GNAQP50148 359 aa11.13□□□□□ -0.63
PRDM1-201ENST00000369089 MDM2Q00987 491 aaPredicted RBP11.13□□□□□ -0.63
PRDM1-201ENST00000369089 PPARAQ07869 468 aa11.13□□□□□ -0.63
PRDM1-201ENST00000369089 FCHO2Q0JRZ9 810 aa11.13□□□□□ -0.63
PRDM1-201ENST00000369089 KRT40Q6A162 431 aa11.13□□□□□ -0.63
PRDM1-201ENST00000369089 U2AF1L4Q8WU68 220 aaKnown RBP11.13□□□□□ -0.63
PRDM1-201ENST00000369089 PTPRN2Q92932 1015 aa11.13□□□□□ -0.63
PRDM1-201ENST00000369089 RAB34Q9BZG1 259 aa11.13□□□□□ -0.63
PRDM1-201ENST00000369089 NLRC4Q9NPP4 1024 aa11.13□□□□□ -0.63
PRDM1-201ENST00000369089 ATPIF1Q9UII2 106 aa11.13□□□□□ -0.63
PRDM1-201ENST00000369089 DAPK2Q9UIK4 370 aa11.13□□□□□ -0.63
PRDM1-201ENST00000369089 HAO1Q9UJM8 370 aa11.13□□□□□ -0.63
PRDM1-201ENST00000369089 AP4S1Q9Y587 144 aa11.13□□□□□ -0.63
PRDM1-201ENST00000369089 TEX33O43247 280 aa11.12□□□□□ -0.63
PRDM1-201ENST00000369089 TJP3O95049 919 aa11.12□□□□□ -0.63
PRDM1-201ENST00000369089 NAA20P61599 178 aa11.12□□□□□ -0.63
PRDM1-201ENST00000369089 DR1Q01658 176 aa11.12□□□□□ -0.63
PRDM1-201ENST00000369089 TMED2Q15363 201 aa11.12□□□□□ -0.63
PRDM1-201ENST00000369089 CNPY1Q3B7I2 92 aa11.12□□□□□ -0.63
PRDM1-201ENST00000369089 ZSCAN29Q8IWY8 852 aaPredicted RBP11.12□□□□□ -0.63
PRDM1-201ENST00000369089 MTBPQ96DY7 904 aa11.12□□□□□ -0.63
PRDM1-201ENST00000369089 ZFYVE19Q96K21 471 aa11.12□□□□□ -0.63
PRDM1-201ENST00000369089 MRPL1Q9BYD6 325 aaKnown RBP11.12□□□□□ -0.63
PRDM1-201ENST00000369089 RNF41Q9H4P4 317 aaPredicted RBP11.12□□□□□ -0.63
PRDM1-201ENST00000369089 AASDHPPTQ9NRN7 309 aa11.12□□□□□ -0.63
PRDM1-201ENST00000369089 SYBUQ9NX95 663 aa11.12□□□□□ -0.63
PRDM1-201ENST00000369089 SPEF1Q9Y4P9 236 aa11.12□□□□□ -0.63
PRDM1-201ENST00000369089 PNMA6EA0A0J9YXQ4 647 aa11.12□□□□□ -0.63
PRDM1-201ENST00000369089 CETN1Q12798 172 aa11.12□□□□□ -0.63
PRDM1-201ENST00000369089 ZNF268Q14587 947 aaPredicted RBP11.12□□□□□ -0.63
PRDM1-201ENST00000369089 DNAL1Q4LDG9 190 aa11.12□□□□□ -0.63
PRDM1-201ENST00000369089 SIRT2Q8IXJ6 389 aa11.12□□□□□ -0.63
PRDM1-201ENST00000369089 ZNF496Q96IT1 587 aaPredicted RBP11.12□□□□□ -0.63
PRDM1-201ENST00000369089 AP1M1Q9BXS5 423 aa11.12□□□□□ -0.63
PRDM1-201ENST00000369089 THAP9Q9H5L6 903 aa11.12□□□□□ -0.63
PRDM1-201ENST00000369089 SLC52A2Q9HAB3 445 aa11.12□□□□□ -0.63
PRDM1-201ENST00000369089 METTL14Q9HCE5 456 aaKnown RBP11.12□□□□□ -0.63
PRDM1-201ENST00000369089 TBCCD1Q9NVR7 557 aa11.12□□□□□ -0.63
PRDM1-201ENST00000369089 WARS2Q9UGM6 360 aaKnown RBP11.12□□□□□ -0.63
PRDM1-201ENST00000369089 TBK1Q9UHD2 729 aa11.12□□□□□ -0.63
PRDM1-201ENST00000369089 XPOTO43592 962 aaKnown RBP11.12□□□□□ -0.63
PRDM1-201ENST00000369089 SPOPO43791 374 aa11.12□□□□□ -0.63
PRDM1-201ENST00000369089 ARFIP2P53365 341 aa11.12□□□□□ -0.63
PRDM1-201ENST00000369089 PUS10Q3MIT2 529 aaKnown RBP11.12□□□□□ -0.63
PRDM1-201ENST00000369089 PAPD7Q5XG87 772 aaKnown RBP11.12□□□□□ -0.63
PRDM1-201ENST00000369089 TLDC1Q6P9B6 456 aa11.12□□□□□ -0.63
PRDM1-201ENST00000369089 LPCAT2Q7L5N7 544 aa11.12□□□□□ -0.63
PRDM1-201ENST00000369089 NAT14Q8WUY8 206 aa11.12□□□□□ -0.63
PRDM1-201ENST00000369089 TSNARE1Q96NA8 513 aa11.12□□□□□ -0.63
PRDM1-201ENST00000369089 OSBPL7Q9BZF2 842 aa11.12□□□□□ -0.63
PRDM1-201ENST00000369089 MKNK2Q9HBH9 465 aa11.12□□□□□ -0.63
PRDM1-201ENST00000369089 DMGDHQ9UI17 866 aaKnown RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms