RNA–Protein interactions for RNA: ENST00000368686.1

CHTOP-201, Transcript of chromatin target of PRMT1, humanhuman

TSL 2 BASIC

Gene CHTOP, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-201ENST00000368686 BAZ2BQ9UIF8 2168 aaKnown RBP19.36■□□□□ 0.69
CHTOP-201ENST00000368686 CASZ1Q86V15 1759 aa19.36■□□□□ 0.69
CHTOP-201ENST00000368686 RIPK2O43353 540 aa19.36■□□□□ 0.69
CHTOP-201ENST00000368686 EYA4O95677 639 aa19.36■□□□□ 0.69
CHTOP-201ENST00000368686 GM2AP17900 193 aa19.36■□□□□ 0.69
CHTOP-201ENST00000368686 RASGRF1Q13972 1273 aa19.36■□□□□ 0.69
CHTOP-201ENST00000368686 INF2Q27J81 1249 aa19.36■□□□□ 0.69
CHTOP-201ENST00000368686 ZNF571Q7Z3V5 609 aaPredicted RBP19.36■□□□□ 0.69
CHTOP-201ENST00000368686 JAMLQ86YT9 394 aa19.36■□□□□ 0.69
CHTOP-201ENST00000368686 RUNDC3BQ96NL0 473 aa19.36■□□□□ 0.69
CHTOP-201ENST00000368686 DCLRE1BQ9H816 532 aa19.36■□□□□ 0.69
CHTOP-201ENST00000368686 ATP8A2Q9NTI2 1148 aa19.36■□□□□ 0.69
CHTOP-201ENST00000368686 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.36■□□□□ 0.69
CHTOP-201ENST00000368686 STOML1Q9UBI4 398 aa19.36■□□□□ 0.69
CHTOP-201ENST00000368686 DBR1Q9UK59 544 aaKnown RBP19.36■□□□□ 0.69
CHTOP-201ENST00000368686 SNX24Q9Y343 169 aa19.36■□□□□ 0.69
CHTOP-201ENST00000368686 ZSCAN9O15535 394 aaPredicted RBP19.35■□□□□ 0.69
CHTOP-201ENST00000368686 GNA14O95837 355 aa19.35■□□□□ 0.69
CHTOP-201ENST00000368686 SKIP12755 728 aa19.35■□□□□ 0.69
CHTOP-201ENST00000368686 MTFR1Q15390 333 aa19.35■□□□□ 0.69
CHTOP-201ENST00000368686 FOXB2Q5VYV0 432 aa19.35■□□□□ 0.69
CHTOP-201ENST00000368686 VSIG1Q86XK7 387 aa19.35■□□□□ 0.69
CHTOP-201ENST00000368686 MIGA1Q8NAN2 632 aa19.35■□□□□ 0.69
CHTOP-201ENST00000368686 OPTNQ96CV9 577 aa19.35■□□□□ 0.69
CHTOP-201ENST00000368686 TGS1Q96RS0 853 aaKnown RBP19.35■□□□□ 0.69
CHTOP-201ENST00000368686 UBE2OQ9C0C9 1292 aaKnown RBP19.35■□□□□ 0.69
CHTOP-201ENST00000368686 INTUQ9ULD6 942 aa19.35■□□□□ 0.69
CHTOP-201ENST00000368686 PHF24Q9UPV7 400 aa19.35■□□□□ 0.69
CHTOP-201ENST00000368686 PCDH11XQ9BZA7 1347 aa19.35■□□□□ 0.69
CHTOP-201ENST00000368686 VHLP40337 213 aa19.35■□□□□ 0.69
CHTOP-201ENST00000368686 MAPK7Q13164 816 aa19.35■□□□□ 0.69
CHTOP-201ENST00000368686 THEMISQ8N1K5 641 aaPredicted RBP19.35■□□□□ 0.69
CHTOP-201ENST00000368686 ARHGAP18Q8N392 663 aa19.35■□□□□ 0.69
CHTOP-201ENST00000368686 DAGLBQ8NCG7 672 aa19.35■□□□□ 0.69
CHTOP-201ENST00000368686 ARHGEF2Q92974 986 aaKnown RBP19.35■□□□□ 0.69
CHTOP-201ENST00000368686 CEP63Q96MT8 703 aa19.35■□□□□ 0.69
CHTOP-201ENST00000368686 PLEKHG4BQ96PX9 1271 aa19.35■□□□□ 0.69
CHTOP-201ENST00000368686 VCX3BQ9H321 246 aa19.35■□□□□ 0.69
CHTOP-201ENST00000368686 GREM2Q9H772 168 aa19.35■□□□□ 0.69
CHTOP-201ENST00000368686 VCX3AQ9NNX9 186 aa19.35■□□□□ 0.69
CHTOP-201ENST00000368686 PCDHA6Q9UN73 950 aa19.35■□□□□ 0.69
CHTOP-201ENST00000368686 USP20Q9Y2K6 914 aa19.35■□□□□ 0.69
CHTOP-201ENST00000368686 PCDHA8Q9Y5H6 950 aa19.35■□□□□ 0.69
CHTOP-201ENST00000368686 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.35■□□□□ 0.69
CHTOP-201ENST00000368686 MYH3P11055 1940 aa19.34■□□□□ 0.69
CHTOP-201ENST00000368686 RARGP13631 454 aa19.34■□□□□ 0.69
CHTOP-201ENST00000368686 ZRSR2Q15696 482 aaKnown RBP19.34■□□□□ 0.69
CHTOP-201ENST00000368686 SOGA3Q5TF21 947 aa19.34■□□□□ 0.69
CHTOP-201ENST00000368686 GALNT17Q6IS24 598 aa19.34■□□□□ 0.69
CHTOP-201ENST00000368686 VSTM1Q6UX27 236 aa19.34■□□□□ 0.69
CHTOP-201ENST00000368686 IRF2BP2Q7Z5L9 587 aa19.34■□□□□ 0.69
CHTOP-201ENST00000368686 UCMAQ8WVF2 138 aa19.34■□□□□ 0.69
CHTOP-201ENST00000368686 NMRK1Q9NWW6 199 aa19.34■□□□□ 0.69
CHTOP-201ENST00000368686 GRHL1Q9NZI5 618 aa19.34■□□□□ 0.69
CHTOP-201ENST00000368686 PDP2Q9P2J9 529 aa19.34■□□□□ 0.69
CHTOP-201ENST00000368686 STK17AQ9UEE5 414 aa19.34■□□□□ 0.69
CHTOP-201ENST00000368686 SEC63Q9UGP8 760 aaKnown RBP19.34■□□□□ 0.69
CHTOP-201ENST00000368686 G3BP2Q9UN86 482 aaKnown RBP19.34■□□□□ 0.69
CHTOP-201ENST00000368686 NR2E1Q9Y466 385 aa19.34■□□□□ 0.69
CHTOP-201ENST00000368686 PITPNM2Q9BZ72 1349 aa19.34■□□□□ 0.69
CHTOP-201ENST00000368686 MEGF6O75095 1541 aa19.34■□□□□ 0.69
CHTOP-201ENST00000368686 MYMKA6NI61 221 aa19.34■□□□□ 0.69
CHTOP-201ENST00000368686 H2AFZP0C0S5 128 aa19.34■□□□□ 0.69
CHTOP-201ENST00000368686 RASSF2P50749 326 aa19.34■□□□□ 0.69
CHTOP-201ENST00000368686 USP4Q13107 963 aa19.34■□□□□ 0.69
CHTOP-201ENST00000368686 CGB2Q6NT52 195 aa19.34■□□□□ 0.69
CHTOP-201ENST00000368686 H2AFVQ71UI9 128 aa19.34■□□□□ 0.69
CHTOP-201ENST00000368686 PROSER2Q86WR7 435 aaPredicted RBP19.34■□□□□ 0.69
CHTOP-201ENST00000368686 PHC3Q8NDX5 983 aa19.34■□□□□ 0.69
CHTOP-201ENST00000368686 UHMK1Q8TAS1 419 aaKnown RBP19.34■□□□□ 0.69
CHTOP-201ENST00000368686 MAGEB18Q96M61 343 aa19.34■□□□□ 0.69
CHTOP-201ENST00000368686 MYLK2Q9H1R3 596 aa19.34■□□□□ 0.69
CHTOP-201ENST00000368686 PENKP01210 267 aaPredicted RBP19.33■□□□□ 0.68
CHTOP-201ENST00000368686 FGFR2P21802 821 aa19.33■□□□□ 0.68
CHTOP-201ENST00000368686 FGFR4P22455 802 aa19.33■□□□□ 0.68
CHTOP-201ENST00000368686 CEBPAP49715 358 aaPredicted RBP19.33■□□□□ 0.68
CHTOP-201ENST00000368686 MARSP56192 900 aaKnown RBP19.33■□□□□ 0.68
CHTOP-201ENST00000368686 ZCWPW2Q504Y3 356 aa19.33■□□□□ 0.68
CHTOP-201ENST00000368686 TRIM59Q8IWR1 403 aa19.33■□□□□ 0.68
CHTOP-201ENST00000368686 MIPOL1Q8TD10 442 aa19.33■□□□□ 0.68
CHTOP-201ENST00000368686 SDR42E1Q8WUS8 393 aa19.33■□□□□ 0.68
CHTOP-201ENST00000368686 GLG1Q92896 1179 aa19.33■□□□□ 0.68
CHTOP-201ENST00000368686 PTPRN2Q92932 1015 aa19.33■□□□□ 0.68
CHTOP-201ENST00000368686 SERPINB12Q96P63 405 aa19.33■□□□□ 0.68
CHTOP-201ENST00000368686 CARD9Q9H257 536 aa19.33■□□□□ 0.68
CHTOP-201ENST00000368686 ATXN10Q9UBB4 475 aa19.33■□□□□ 0.68
CHTOP-201ENST00000368686 NENFQ9UMX5 172 aa19.33■□□□□ 0.68
CHTOP-201ENST00000368686 TNS3Q68CZ2 1445 aa19.33■□□□□ 0.68
CHTOP-201ENST00000368686 MAGEA13PA6NCF6 341 aa19.32■□□□□ 0.68
CHTOP-201ENST00000368686 SIGLEC16A6NMB1 481 aa19.32■□□□□ 0.68
CHTOP-201ENST00000368686 H0Y3Z8 333 aa19.32■□□□□ 0.68
CHTOP-201ENST00000368686 TRAF5O00463 557 aa19.32■□□□□ 0.68
CHTOP-201ENST00000368686 HGSO14964 777 aaPredicted RBP19.32■□□□□ 0.68
CHTOP-201ENST00000368686 ECE2O60344 883 aa19.32■□□□□ 0.68
CHTOP-201ENST00000368686 POLGP54098 1239 aaPredicted RBP19.32■□□□□ 0.68
CHTOP-201ENST00000368686 CACNA2D1P54289 1103 aa19.32■□□□□ 0.68
CHTOP-201ENST00000368686 OCRLQ01968 901 aa19.32■□□□□ 0.68
CHTOP-201ENST00000368686 RCN2Q14257 317 aa19.32■□□□□ 0.68
CHTOP-201ENST00000368686 PABPC1LQ4VXU2 614 aaKnown RBP19.32■□□□□ 0.68
CHTOP-201ENST00000368686 VPS36Q86VN1 386 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms