RNA–Protein interactions for RNA: ENST00000368648.7

EBF3-202, Transcript of early B cell factor 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene EBF3, Length 4,375 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3-202ENST00000368648 CUEDC2Q9H467 287 aa11.61□□□□□ -0.55
EBF3-202ENST00000368648 RAB21Q9UL25 225 aa11.61□□□□□ -0.55
EBF3-202ENST00000368648 MEGF6O75095 1541 aa11.61□□□□□ -0.55
EBF3-202ENST00000368648 CCT8L1PA6NM43 557 aa11.61□□□□□ -0.55
EBF3-202ENST00000368648 MAP3K7O43318 606 aa11.61□□□□□ -0.55
EBF3-202ENST00000368648 AP1G2O75843 785 aa11.61□□□□□ -0.55
EBF3-202ENST00000368648 TPD52P55327 224 aaPredicted RBP11.61□□□□□ -0.55
EBF3-202ENST00000368648 KCNB1Q14721 858 aa11.61□□□□□ -0.55
EBF3-202ENST00000368648 SYCP2LQ5T4T6 812 aa11.61□□□□□ -0.55
EBF3-202ENST00000368648 ATG9AQ7Z3C6 839 aa11.61□□□□□ -0.55
EBF3-202ENST00000368648 TBC1D16Q8TBP0 767 aa11.61□□□□□ -0.55
EBF3-202ENST00000368648 SNRNP27Q8WVK2 155 aaKnown RBP11.61□□□□□ -0.55
EBF3-202ENST00000368648 C9orf72Q96LT7 481 aa11.61□□□□□ -0.55
EBF3-202ENST00000368648 MXD3Q9BW11 206 aa11.61□□□□□ -0.55
EBF3-202ENST00000368648 MAK16Q9BXY0 300 aaKnown RBP11.61□□□□□ -0.55
EBF3-202ENST00000368648 UBE2TQ9NPD8 197 aaPredicted RBP11.61□□□□□ -0.55
EBF3-202ENST00000368648 POLR2MP0CAP2 368 aa11.61□□□□□ -0.55
EBF3-202ENST00000368648 UBTFL6P0CB48 400 aaPredicted RBP11.61□□□□□ -0.55
EBF3-202ENST00000368648 ERP27Q96DN0 273 aa11.61□□□□□ -0.55
EBF3-202ENST00000368648 ZNF341Q9BYN7 854 aa11.61□□□□□ -0.55
EBF3-202ENST00000368648 MRPL11Q9Y3B7 192 aaKnown RBP11.61□□□□□ -0.55
EBF3-202ENST00000368648 COMMD10Q9Y6G5 202 aa11.61□□□□□ -0.55
EBF3-202ENST00000368648 TNNI1P19237 187 aa11.6□□□□□ -0.55
EBF3-202ENST00000368648 SMTNP53814 917 aa11.6□□□□□ -0.55
EBF3-202ENST00000368648 SLC29A2Q14542 456 aa11.6□□□□□ -0.55
EBF3-202ENST00000368648 PDIA6Q15084 440 aa11.6□□□□□ -0.55
EBF3-202ENST00000368648 ODR4Q5SWX8 454 aa11.6□□□□□ -0.55
EBF3-202ENST00000368648 FAM186BQ8IYM0 893 aa11.6□□□□□ -0.55
EBF3-202ENST00000368648 PRCCQ92733 491 aaPredicted RBP11.6□□□□□ -0.55
EBF3-202ENST00000368648 AMNQ9BXJ7 453 aa11.6□□□□□ -0.55
EBF3-202ENST00000368648 PACSIN1Q9BY11 444 aa11.6□□□□□ -0.55
EBF3-202ENST00000368648 MAD1L1Q9Y6D9 718 aa11.6□□□□□ -0.55
EBF3-202ENST00000368648 PPFIA2O75334 1257 aa11.6□□□□□ -0.55
EBF3-202ENST00000368648 GNA14O95837 355 aa11.6□□□□□ -0.55
EBF3-202ENST00000368648 BMP3P12645 472 aa11.6□□□□□ -0.55
EBF3-202ENST00000368648 YY1P25490 414 aa11.6□□□□□ -0.55
EBF3-202ENST00000368648 SSTR3P32745 418 aaPredicted RBP11.6□□□□□ -0.55
EBF3-202ENST00000368648 CTCFP49711 727 aaPredicted RBP11.6□□□□□ -0.55
EBF3-202ENST00000368648 EIF3BP55884 814 aaKnown RBP11.6□□□□□ -0.55
EBF3-202ENST00000368648 DEUP1Q05D60 604 aa11.6□□□□□ -0.55
EBF3-202ENST00000368648 NXNQ6DKJ4 435 aa11.6□□□□□ -0.55
EBF3-202ENST00000368648 ADSSL1Q8N142 457 aa11.6□□□□□ -0.55
EBF3-202ENST00000368648 TSNARE1Q96NA8 513 aa11.6□□□□□ -0.55
EBF3-202ENST00000368648 WRNIP1Q96S55 665 aa11.6□□□□□ -0.55
EBF3-202ENST00000368648 VCX3AQ9NNX9 186 aa11.6□□□□□ -0.55
EBF3-202ENST00000368648 RHBDL2Q9NX52 303 aa11.6□□□□□ -0.55
EBF3-202ENST00000368648 GSG1L2A8MUP6 293 aa11.6□□□□□ -0.55
EBF3-202ENST00000368648 CFLARO15519 480 aa11.6□□□□□ -0.55
EBF3-202ENST00000368648 NTSR2O95665 410 aa11.6□□□□□ -0.55
EBF3-202ENST00000368648 ZCCHC18P0CG32 403 aa11.6□□□□□ -0.55
EBF3-202ENST00000368648 FERP16591 822 aa11.6□□□□□ -0.55
EBF3-202ENST00000368648 CPA2P48052 419 aa11.6□□□□□ -0.55
EBF3-202ENST00000368648 TRAPPC10P48553 1259 aa11.6□□□□□ -0.55
EBF3-202ENST00000368648 BBS9Q3SYG4 887 aa11.6□□□□□ -0.55
EBF3-202ENST00000368648 TMTC3Q6ZXV5 915 aa11.6□□□□□ -0.55
EBF3-202ENST00000368648 SP8Q8IXZ3 490 aa11.6□□□□□ -0.55
EBF3-202ENST00000368648 DCLK2Q8N568 766 aa11.6□□□□□ -0.55
EBF3-202ENST00000368648 SLC10A4Q96EP9 437 aa11.6□□□□□ -0.55
EBF3-202ENST00000368648 FGD4Q96M96 766 aa11.6□□□□□ -0.55
EBF3-202ENST00000368648 GOLGA8IPA6NC78 632 aa11.6□□□□□ -0.55
EBF3-202ENST00000368648 RASSF10A6NK89 507 aa11.6□□□□□ -0.55
EBF3-202ENST00000368648 GOLGA8JA6NMD2 632 aa11.6□□□□□ -0.55
EBF3-202ENST00000368648 SGK1O00141 431 aa11.6□□□□□ -0.55
EBF3-202ENST00000368648 SERPINB4P48594 390 aa11.6□□□□□ -0.55
EBF3-202ENST00000368648 PMS1P54277 932 aaKnown RBP11.6□□□□□ -0.55
EBF3-202ENST00000368648 IRX1P78414 480 aaPredicted RBP11.6□□□□□ -0.55
EBF3-202ENST00000368648 ADCY2Q08462 1091 aa11.6□□□□□ -0.55
EBF3-202ENST00000368648 NKX1-1Q15270 411 aaPredicted RBP11.6□□□□□ -0.55
EBF3-202ENST00000368648 GEN1Q17RS7 908 aa11.6□□□□□ -0.55
EBF3-202ENST00000368648 WDR44Q5JSH3 913 aa11.6□□□□□ -0.55
EBF3-202ENST00000368648 SH2D4BQ5SQS7 431 aa11.6□□□□□ -0.55
EBF3-202ENST00000368648 GPATCH4Q5T3I0 446 aaKnown RBP11.6□□□□□ -0.55
EBF3-202ENST00000368648 PTF1AQ7RTS3 328 aa11.6□□□□□ -0.55
EBF3-202ENST00000368648 DPP9Q86TI2 863 aa11.6□□□□□ -0.55
EBF3-202ENST00000368648 COL23A1Q86Y22 540 aaPredicted RBP11.6□□□□□ -0.55
EBF3-202ENST00000368648 PIGOQ8TEQ8 1089 aa11.6□□□□□ -0.55
EBF3-202ENST00000368648 IQCDQ96DY2 449 aa11.6□□□□□ -0.55
EBF3-202ENST00000368648 FAM161BQ96MY7 647 aa11.6□□□□□ -0.55
EBF3-202ENST00000368648 KLF6Q99612 283 aaPredicted RBP11.6□□□□□ -0.55
EBF3-202ENST00000368648 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.6□□□□□ -0.55
EBF3-202ENST00000368648 NT5C3AQ9H0P0 336 aa11.6□□□□□ -0.55
EBF3-202ENST00000368648 TMEM60Q9H2L4 133 aa11.6□□□□□ -0.55
EBF3-202ENST00000368648 RIC8AQ9NPQ8 531 aa11.6□□□□□ -0.55
EBF3-202ENST00000368648 METTL5Q9NRN9 209 aaKnown RBP11.6□□□□□ -0.55
EBF3-202ENST00000368648 PPARGC1AQ9UBK2 798 aaKnown RBP11.6□□□□□ -0.55
EBF3-202ENST00000368648 HPSEQ9Y251 543 aa11.6□□□□□ -0.55
EBF3-202ENST00000368648 USP42Q9H9J4 1324 aaKnown RBP11.6□□□□□ -0.55
EBF3-202ENST00000368648 MAPK13O15264 365 aa11.59□□□□□ -0.55
EBF3-202ENST00000368648 SRGNP10124 158 aa11.59□□□□□ -0.55
EBF3-202ENST00000368648 DPEP1P16444 411 aa11.59□□□□□ -0.55
EBF3-202ENST00000368648 ITIH3Q06033 890 aa11.59□□□□□ -0.55
EBF3-202ENST00000368648 STRN3Q13033 797 aa11.59□□□□□ -0.55
EBF3-202ENST00000368648 TRADDQ15628 312 aa11.59□□□□□ -0.55
EBF3-202ENST00000368648 C4orf33Q8N1A6 199 aa11.59□□□□□ -0.55
EBF3-202ENST00000368648 SRBD1Q8N5C6 995 aaKnown RBP11.59□□□□□ -0.55
EBF3-202ENST00000368648 KAT2BQ92831 832 aa11.59□□□□□ -0.55
EBF3-202ENST00000368648 VCPKMTQ9H867 229 aa11.59□□□□□ -0.55
EBF3-202ENST00000368648 CYP4F11Q9HBI6 524 aa11.59□□□□□ -0.55
EBF3-202ENST00000368648 DDX20Q9UHI6 824 aaKnown RBP11.59□□□□□ -0.55
EBF3-202ENST00000368648 NPHP3-ACAD11A0A0J9YXS1 232 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms