RNA–Protein interactions for RNA: ENST00000367503.7

SHPRH-202, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 5 BASIC

Gene SHPRH, Length 5,237 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-202ENST00000367503 KIAA2013Q8IYS2 634 aa13.12□□□□□ -0.31
SHPRH-202ENST00000367503 PYROXD1Q8WU10 500 aa13.12□□□□□ -0.31
SHPRH-202ENST00000367503 THAP11Q96EK4 314 aa13.12□□□□□ -0.31
SHPRH-202ENST00000367503 ISCUQ9H1K1 167 aa13.12□□□□□ -0.31
SHPRH-202ENST00000367503 SEC31BQ9NQW1 1179 aa13.12□□□□□ -0.31
SHPRH-202ENST00000367503 FGFR4P22455 802 aa13.12□□□□□ -0.31
SHPRH-202ENST00000367503 AARSP49588 968 aaKnown RBP eCLIP13.12□□□□□ -0.31
SHPRH-202ENST00000367503 HSPA2P54652 639 aa13.12□□□□□ -0.31
SHPRH-202ENST00000367503 PROM2Q8N271 834 aa13.12□□□□□ -0.31
SHPRH-202ENST00000367503 KCND1Q9NSA2 647 aa13.12□□□□□ -0.31
SHPRH-202ENST00000367503 APOBEC2Q9Y235 224 aaKnown RBP13.12□□□□□ -0.31
SHPRH-202ENST00000367503 XDHP47989 1333 aa13.12□□□□□ -0.31
SHPRH-202ENST00000367503 RAD51CO43502 376 aa13.12□□□□□ -0.31
SHPRH-202ENST00000367503 ACTN1P12814 892 aa13.12□□□□□ -0.31
SHPRH-202ENST00000367503 FAM83BQ5T0W9 1011 aa13.12□□□□□ -0.31
SHPRH-202ENST00000367503 RARS2Q5T160 578 aaKnown RBP13.12□□□□□ -0.31
SHPRH-202ENST00000367503 JADE1Q6IE81 842 aa13.12□□□□□ -0.31
SHPRH-202ENST00000367503 TTBK2Q6IQ55 1244 aa13.12□□□□□ -0.31
SHPRH-202ENST00000367503 TBC1D10CQ8IV04 446 aa13.12□□□□□ -0.31
SHPRH-202ENST00000367503 NUDCD3Q8IVD9 361 aa13.12□□□□□ -0.31
SHPRH-202ENST00000367503 LRRC34Q8IZ02 419 aa13.12□□□□□ -0.31
SHPRH-202ENST00000367503 SCYL1Q96KG9 808 aa13.12□□□□□ -0.31
SHPRH-202ENST00000367503 NACC1Q96RE7 527 aa13.12□□□□□ -0.31
SHPRH-202ENST00000367503 LBHD1Q9BQE6 289 aaPredicted RBP13.12□□□□□ -0.31
SHPRH-202ENST00000367503 PLA2G4BP0C869 781 aa13.12□□□□□ -0.31
SHPRH-202ENST00000367503 TTC25Q96NG3 672 aa13.12□□□□□ -0.31
SHPRH-202ENST00000367503 LAMC1P11047 1609 aa13.12□□□□□ -0.31
SHPRH-202ENST00000367503 PVALEFA0A1B0GWK0 134 aa13.11□□□□□ -0.31
SHPRH-202ENST00000367503 UBAP1LF5GYI3 381 aa13.11□□□□□ -0.31
SHPRH-202ENST00000367503 SUPT3HO75486 399 aa13.11□□□□□ -0.31
SHPRH-202ENST00000367503 HSD17B3P37058 310 aa13.11□□□□□ -0.31
SHPRH-202ENST00000367503 RABGAP1LQ5R372 815 aa13.11□□□□□ -0.31
SHPRH-202ENST00000367503 MDM1Q8TC05 714 aa13.11□□□□□ -0.31
SHPRH-202ENST00000367503 MXD3Q9BW11 206 aa13.11□□□□□ -0.31
SHPRH-202ENST00000367503 TMEM206Q9H813 350 aa13.11□□□□□ -0.31
SHPRH-202ENST00000367503 PDE5AO76074 875 aa13.11□□□□□ -0.31
SHPRH-202ENST00000367503 ATICP31939 592 aa13.11□□□□□ -0.31
SHPRH-202ENST00000367503 KRT81Q14533 505 aa13.11□□□□□ -0.31
SHPRH-202ENST00000367503 SGMS1Q86VZ5 419 aa13.11□□□□□ -0.31
SHPRH-202ENST00000367503 FUKQ8N0W3 1084 aa13.11□□□□□ -0.31
SHPRH-202ENST00000367503 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.11□□□□□ -0.31
SHPRH-202ENST00000367503 H0YIN7 160 aa13.11□□□□□ -0.31
SHPRH-202ENST00000367503 ADCY3O60266 1144 aa13.11□□□□□ -0.31
SHPRH-202ENST00000367503 PLEKHA8P1O95397 391 aa13.11□□□□□ -0.31
SHPRH-202ENST00000367503 NEK2P51955 445 aa13.11□□□□□ -0.31
SHPRH-202ENST00000367503 ZBTB8OSQ8IWT0 167 aa13.11□□□□□ -0.31
SHPRH-202ENST00000367503 OPTNQ96CV9 577 aa13.11□□□□□ -0.31
SHPRH-202ENST00000367503 ACCSQ96QU6 501 aa13.11□□□□□ -0.31
SHPRH-202ENST00000367503 UPF3AQ9H1J1 476 aaKnown RBP13.11□□□□□ -0.31
SHPRH-202ENST00000367503 DDX20Q9UHI6 824 aaKnown RBP13.11□□□□□ -0.31
SHPRH-202ENST00000367503 COPEO14579 308 aa13.11□□□□□ -0.31
SHPRH-202ENST00000367503 TTI1O43156 1089 aa13.11□□□□□ -0.31
SHPRH-202ENST00000367503 CRKLP46109 303 aaKnown RBP13.11□□□□□ -0.31
SHPRH-202ENST00000367503 ZNF211Q13398 564 aaPredicted RBP13.11□□□□□ -0.31
SHPRH-202ENST00000367503 POMGNT1Q8WZA1 660 aa13.11□□□□□ -0.31
SHPRH-202ENST00000367503 TMBIM4Q9HC24 238 aa13.11□□□□□ -0.31
SHPRH-202ENST00000367503 TESPA1A2RU30 521 aaPredicted RBP13.1□□□□□ -0.31
SHPRH-202ENST00000367503 E7ENQ6 273 aa13.1□□□□□ -0.31
SHPRH-202ENST00000367503 EXOSC10Q01780 885 aaKnown RBP13.1□□□□□ -0.31
SHPRH-202ENST00000367503 PDXDC1Q6P996 788 aa13.1□□□□□ -0.31
SHPRH-202ENST00000367503 CATSPER1Q8NEC5 780 aa13.1□□□□□ -0.31
SHPRH-202ENST00000367503 PIGOQ8TEQ8 1089 aa13.1□□□□□ -0.31
SHPRH-202ENST00000367503 LZICQ8WZA0 190 aa13.1□□□□□ -0.31
SHPRH-202ENST00000367503 SPC25Q9HBM1 224 aa13.1□□□□□ -0.31
SHPRH-202ENST00000367503 GINM1Q9NU53 330 aa13.1□□□□□ -0.31
SHPRH-202ENST00000367503 NDUFA13Q9P0J0 144 aa13.1□□□□□ -0.31
SHPRH-202ENST00000367503 THRAP3Q9Y2W1 955 aaKnown RBP13.1□□□□□ -0.31
SHPRH-202ENST00000367503 TNNC2P02585 160 aa13.1□□□□□ -0.31
SHPRH-202ENST00000367503 AP1B1Q10567 949 aa13.1□□□□□ -0.31
SHPRH-202ENST00000367503 HIC1Q14526 733 aa13.1□□□□□ -0.31
SHPRH-202ENST00000367503 BBS9Q3SYG4 887 aa13.1□□□□□ -0.31
SHPRH-202ENST00000367503 WDR17Q8IZU2 1322 aa13.1□□□□□ -0.31
SHPRH-202ENST00000367503 PFKFB3Q16875 520 aaPredicted RBP13.1□□□□□ -0.31
SHPRH-202ENST00000367503 ZCWPW2Q504Y3 356 aa13.1□□□□□ -0.31
SHPRH-202ENST00000367503 CYB5R4Q7L1T6 521 aa13.1□□□□□ -0.31
SHPRH-202ENST00000367503 LARGE2Q8N3Y3 721 aa13.1□□□□□ -0.31
SHPRH-202ENST00000367503 KANSL2Q9H9L4 492 aa13.1□□□□□ -0.31
SHPRH-202ENST00000367503 LY9Q9HBG7 655 aa13.1□□□□□ -0.31
SHPRH-202ENST00000367503 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.1□□□□□ -0.31
SHPRH-202ENST00000367503 IL1RAPL1Q9NZN1 696 aa13.1□□□□□ -0.31
SHPRH-202ENST00000367503 WARS2Q9UGM6 360 aaKnown RBP13.1□□□□□ -0.31
SHPRH-202ENST00000367503 SERPINB13Q9UIV8 391 aa13.1□□□□□ -0.31
SHPRH-202ENST00000367503 ORC4O43929 436 aa13.1□□□□□ -0.31
SHPRH-202ENST00000367503 ALAS1P13196 640 aa13.1□□□□□ -0.31
SHPRH-202ENST00000367503 NOP14P78316 857 aaKnown RBP13.1□□□□□ -0.31
SHPRH-202ENST00000367503 CNGA3Q16281 694 aa13.1□□□□□ -0.31
SHPRH-202ENST00000367503 KIAA1755Q5JYT7 1200 aa13.1□□□□□ -0.31
SHPRH-202ENST00000367503 MRPL47Q9HD33 250 aaKnown RBP13.1□□□□□ -0.31
SHPRH-202ENST00000367503 LRRC36Q1X8D7 754 aa13.09□□□□□ -0.31
SHPRH-202ENST00000367503 FSCBQ5H9T9 825 aa13.09□□□□□ -0.31
SHPRH-202ENST00000367503 CCDC137Q6PK04 289 aaKnown RBP13.09□□□□□ -0.31
SHPRH-202ENST00000367503 DBR1Q9UK59 544 aaKnown RBP13.09□□□□□ -0.31
SHPRH-202ENST00000367503 CLIC2O15247 247 aa13.09□□□□□ -0.31
SHPRH-202ENST00000367503 ABCB5Q2M3G0 1257 aa13.09□□□□□ -0.31
SHPRH-202ENST00000367503 YTHDF3Q7Z739 585 aaKnown RBP13.09□□□□□ -0.31
SHPRH-202ENST00000367503 PDIK1LQ8N165 341 aa13.09□□□□□ -0.31
SHPRH-202ENST00000367503 ENAHQ8N8S7 591 aaPredicted RBP13.09□□□□□ -0.31
SHPRH-202ENST00000367503 EDEM3Q9BZQ6 932 aa13.09□□□□□ -0.31
SHPRH-202ENST00000367503 FAM96AQ9H5X1 160 aa13.09□□□□□ -0.31
SHPRH-202ENST00000367503 CYP2D7A0A087X1C5 515 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms