RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 M0QYV0 167 aa16.77■□□□□ 0.28
NUCKS1-201ENST00000367142 KCNQ4P56696 695 aa16.77■□□□□ 0.28
NUCKS1-201ENST00000367142 GTSE1Q9NYZ3 720 aa16.77■□□□□ 0.28
NUCKS1-201ENST00000367142 ZBTB5O15062 677 aa16.77■□□□□ 0.28
NUCKS1-201ENST00000367142 CTNND1O60716 968 aaKnown RBP16.77■□□□□ 0.28
NUCKS1-201ENST00000367142 KYAT1Q16773 422 aa16.77■□□□□ 0.28
NUCKS1-201ENST00000367142 FSCBQ5H9T9 825 aa16.77■□□□□ 0.28
NUCKS1-201ENST00000367142 TMED8Q6PL24 325 aaPredicted RBP16.77■□□□□ 0.28
NUCKS1-201ENST00000367142 GRAMD1CQ8IYS0 662 aa16.77■□□□□ 0.28
NUCKS1-201ENST00000367142 PUS7LQ9H0K6 701 aaKnown RBP16.77■□□□□ 0.28
NUCKS1-201ENST00000367142 ANTXR1Q9H6X2 564 aa16.77■□□□□ 0.28
NUCKS1-201ENST00000367142 CAPN11Q9UMQ6 739 aa16.77■□□□□ 0.28
NUCKS1-201ENST00000367142 KRT38O76015 456 aa16.77■□□□□ 0.28
NUCKS1-201ENST00000367142 ADCY2Q08462 1091 aa16.77■□□□□ 0.28
NUCKS1-201ENST00000367142 IFT88Q13099 833 aa16.77■□□□□ 0.28
NUCKS1-201ENST00000367142 PAGE5Q96GU1 130 aa16.77■□□□□ 0.28
NUCKS1-201ENST00000367142 RMDN2Q96LZ7 410 aa16.77■□□□□ 0.28
NUCKS1-201ENST00000367142 BRIP1Q9BX63 1249 aa16.77■□□□□ 0.28
NUCKS1-201ENST00000367142 USP17L10C9JJH3 530 aa16.77■□□□□ 0.27
NUCKS1-201ENST00000367142 SDC4P31431 198 aa16.77■□□□□ 0.27
NUCKS1-201ENST00000367142 RHPN2Q8IUC4 686 aa16.77■□□□□ 0.27
NUCKS1-201ENST00000367142 RAET1EQ8TD07 263 aa16.77■□□□□ 0.27
NUCKS1-201ENST00000367142 HEG1Q9ULI3 1381 aa16.77■□□□□ 0.27
NUCKS1-201ENST00000367142 PRPF4O43172 522 aaKnown RBP eCLIP16.77■□□□□ 0.276e-7■■■■□ 23
NUCKS1-201ENST00000367142 KCNJ6P48051 423 aa16.77■□□□□ 0.27
NUCKS1-201ENST00000367142 CCT5P48643 541 aa16.77■□□□□ 0.27
NUCKS1-201ENST00000367142 C6orf118Q5T5N4 469 aa16.77■□□□□ 0.27
NUCKS1-201ENST00000367142 PPP1R18Q6NYC8 613 aa16.77■□□□□ 0.27
NUCKS1-201ENST00000367142 EPAS1Q99814 870 aa16.77■□□□□ 0.27
NUCKS1-201ENST00000367142 ADAMTS12P58397 1594 aa16.77■□□□□ 0.27
NUCKS1-201ENST00000367142 CYBBP04839 570 aa16.77■□□□□ 0.27
NUCKS1-201ENST00000367142 TBXAS1P24557 533 aaPredicted RBP16.77■□□□□ 0.27
NUCKS1-201ENST00000367142 SMARCA1P28370 1054 aa16.77■□□□□ 0.27
NUCKS1-201ENST00000367142 ZNF394Q53GI3 561 aa16.77■□□□□ 0.27
NUCKS1-201ENST00000367142 EFHC2Q5JST6 749 aa16.77■□□□□ 0.27
NUCKS1-201ENST00000367142 FMO2Q99518 471 aa16.77■□□□□ 0.27
NUCKS1-201ENST00000367142 SYF2O95926 243 aaKnown RBP16.76■□□□□ 0.27
NUCKS1-201ENST00000367142 NR5A1Q13285 461 aa16.76■□□□□ 0.27
NUCKS1-201ENST00000367142 DGKHQ86XP1 1220 aa16.76■□□□□ 0.27
NUCKS1-201ENST00000367142 SYNDIG1Q9H7V2 258 aa16.76■□□□□ 0.27
NUCKS1-201ENST00000367142 SAYSD1Q9NPB0 183 aa16.76■□□□□ 0.27
NUCKS1-201ENST00000367142 CDV3Q9UKY7 258 aaKnown RBP16.76■□□□□ 0.27
NUCKS1-201ENST00000367142 COPS2P61201 443 aa16.76■□□□□ 0.27
NUCKS1-201ENST00000367142 PADI6Q6TGC4 694 aa16.76■□□□□ 0.27
NUCKS1-201ENST00000367142 TAS2R42Q7RTR8 314 aa16.76■□□□□ 0.27
NUCKS1-201ENST00000367142 GPR101Q96P66 508 aaPredicted RBP16.76■□□□□ 0.27
NUCKS1-201ENST00000367142 KDM5AP29375 1690 aaKnown RBP16.76■□□□□ 0.27
NUCKS1-201ENST00000367142 IQCA1LA6NCM1 817 aa16.76■□□□□ 0.27
NUCKS1-201ENST00000367142 CLEC4GQ6UXB4 293 aa16.76■□□□□ 0.27
NUCKS1-201ENST00000367142 TDRD7Q8NHU6 1098 aaKnown RBP16.76■□□□□ 0.27
NUCKS1-201ENST00000367142 SH3RF3Q8TEJ3 882 aaPredicted RBP16.76■□□□□ 0.27
NUCKS1-201ENST00000367142 KLHL29Q96CT2 875 aa16.76■□□□□ 0.27
NUCKS1-201ENST00000367142 MRPL40Q9NQ50 206 aaKnown RBP16.76■□□□□ 0.27
NUCKS1-201ENST00000367142 RNF146Q9NTX7 359 aa16.76■□□□□ 0.27
NUCKS1-201ENST00000367142 SYNDIG1LA6NDD5 238 aa16.76■□□□□ 0.27
NUCKS1-201ENST00000367142 PI4K2BG5E9Z4 385 aa16.76■□□□□ 0.27
NUCKS1-201ENST00000367142 ZNF189O75820 626 aaPredicted RBP16.76■□□□□ 0.27
NUCKS1-201ENST00000367142 DEUP1Q05D60 604 aa16.76■□□□□ 0.27
NUCKS1-201ENST00000367142 PIP4K2CQ8TBX8 421 aa16.76■□□□□ 0.27
NUCKS1-201ENST00000367142 SPATA33Q96N06 139 aa16.76■□□□□ 0.27
NUCKS1-201ENST00000367142 TRIM55Q9BYV6 548 aa16.76■□□□□ 0.27
NUCKS1-201ENST00000367142 DNAJC12Q9UKB3 198 aa16.76■□□□□ 0.27
NUCKS1-201ENST00000367142 PLEKHG1Q9ULL1 1385 aa16.76■□□□□ 0.27
NUCKS1-201ENST00000367142 ASB14A6NK59 587 aa16.76■□□□□ 0.27
NUCKS1-201ENST00000367142 TBC1D9BQ66K14 1250 aa16.76■□□□□ 0.27
NUCKS1-201ENST00000367142 WDR75Q8IWA0 830 aaKnown RBP16.76■□□□□ 0.27
NUCKS1-201ENST00000367142 CYP2D7A0A087X1C5 515 aa16.75■□□□□ 0.27
NUCKS1-201ENST00000367142 CUL1Q13616 776 aa16.75■□□□□ 0.27
NUCKS1-201ENST00000367142 THEMIS2Q5TEJ8 643 aa16.75■□□□□ 0.27
NUCKS1-201ENST00000367142 RASSF3Q86WH2 238 aa16.75■□□□□ 0.27
NUCKS1-201ENST00000367142 GPBP1L1Q9HC44 474 aaPredicted RBP16.75■□□□□ 0.27
NUCKS1-201ENST00000367142 KIF17Q9P2E2 1029 aa16.75■□□□□ 0.27
NUCKS1-201ENST00000367142 CNOT8Q9UFF9 292 aaKnown RBP16.75■□□□□ 0.27
NUCKS1-201ENST00000367142 ANKARQ7Z5J8 1434 aa16.75■□□□□ 0.27
NUCKS1-201ENST00000367142 RPS6KA4O75676 772 aa16.75■□□□□ 0.27
NUCKS1-201ENST00000367142 SASH1O94885 1247 aa16.75■□□□□ 0.27
NUCKS1-201ENST00000367142 ARL4DP49703 201 aa16.75■□□□□ 0.27
NUCKS1-201ENST00000367142 PDXDC1Q6P996 788 aa16.75■□□□□ 0.27
NUCKS1-201ENST00000367142 PATL1Q86TB9 770 aaKnown RBP16.75■□□□□ 0.27
NUCKS1-201ENST00000367142 ZNF589Q86UQ0 364 aaPredicted RBP16.75■□□□□ 0.27
NUCKS1-201ENST00000367142 XXYLT1Q8NBI6 393 aa16.75■□□□□ 0.27
NUCKS1-201ENST00000367142 SFI1A8K8P3 1242 aa16.75■□□□□ 0.27
NUCKS1-201ENST00000367142 ZNF197O14709 1029 aa16.75■□□□□ 0.27
NUCKS1-201ENST00000367142 DNAJC6O75061 913 aa16.75■□□□□ 0.27
NUCKS1-201ENST00000367142 CXCR5P32302 372 aa16.75■□□□□ 0.27
NUCKS1-201ENST00000367142 TMPRSS15P98073 1019 aa16.75■□□□□ 0.27
NUCKS1-201ENST00000367142 CYP27A1Q02318 531 aa16.75■□□□□ 0.27
NUCKS1-201ENST00000367142 GTF2H3Q13889 308 aa16.75■□□□□ 0.27
NUCKS1-201ENST00000367142 FAM133BQ5BKY9 247 aaKnown RBP16.75■□□□□ 0.27
NUCKS1-201ENST00000367142 ACRBPQ8NEB7 543 aa16.75■□□□□ 0.27
NUCKS1-201ENST00000367142 PIGOQ8TEQ8 1089 aa16.75■□□□□ 0.27
NUCKS1-201ENST00000367142 OTUB1Q96FW1 271 aaPredicted RBP16.75■□□□□ 0.27
NUCKS1-201ENST00000367142 ZNF560Q96MR9 790 aa16.75■□□□□ 0.27
NUCKS1-201ENST00000367142 ASPSCR1Q9BZE9 553 aa16.75■□□□□ 0.27
NUCKS1-201ENST00000367142 NDFIP2Q9NV92 336 aa16.75■□□□□ 0.27
NUCKS1-201ENST00000367142 ANAPC7Q9UJX3 599 aa16.75■□□□□ 0.27
NUCKS1-201ENST00000367142 PODXLO00592 558 aa16.75■□□□□ 0.27
NUCKS1-201ENST00000367142 RBBP7Q16576 425 aa16.75■□□□□ 0.27
NUCKS1-201ENST00000367142 SUSD4Q5VX71 490 aa16.75■□□□□ 0.27
NUCKS1-201ENST00000367142 TSSK1BQ9BXA7 367 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms