RNA–Protein interactions for RNA: ENST00000366815.7

H3F3A-203, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3A, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-203ENST00000366815 RSPH3Q86UC2 560 aa12.62□□□□□ -0.39
H3F3A-203ENST00000366815 RASGRP4Q8TDF6 673 aa12.62□□□□□ -0.39
H3F3A-203ENST00000366815 TRAPPC12Q8WVT3 735 aa12.62□□□□□ -0.39
H3F3A-203ENST00000366815 HPS1Q92902 700 aa12.62□□□□□ -0.39
H3F3A-203ENST00000366815 ASB2Q96Q27 587 aa12.62□□□□□ -0.39
H3F3A-203ENST00000366815 TGS1Q96RS0 853 aaKnown RBP12.62□□□□□ -0.39
H3F3A-203ENST00000366815 SLC26A6Q9BXS9 759 aa12.62□□□□□ -0.39
H3F3A-203ENST00000366815 SUGCTQ9HAC7 445 aa12.62□□□□□ -0.39
H3F3A-203ENST00000366815 VPS54Q9P1Q0 977 aa12.62□□□□□ -0.39
H3F3A-203ENST00000366815 CYP46A1Q9Y6A2 500 aa12.62□□□□□ -0.39
H3F3A-203ENST00000366815 TTC3P53804 2025 aa12.62□□□□□ -0.39
H3F3A-203ENST00000366815 EVPLQ92817 2033 aa12.61□□□□□ -0.39
H3F3A-203ENST00000366815 DDX39AO00148 427 aaKnown RBP12.61□□□□□ -0.39
H3F3A-203ENST00000366815 WFS1O76024 890 aa12.61□□□□□ -0.39
H3F3A-203ENST00000366815 RPLP2P05387 115 aaKnown RBP12.61□□□□□ -0.39
H3F3A-203ENST00000366815 CIITAP33076 1130 aa12.61□□□□□ -0.39
H3F3A-203ENST00000366815 SLC26A2P50443 739 aa12.61□□□□□ -0.39
H3F3A-203ENST00000366815 MRPS6P82932 125 aaKnown RBP12.61□□□□□ -0.39
H3F3A-203ENST00000366815 SETQ01105 290 aaPredicted RBP12.61□□□□□ -0.39
H3F3A-203ENST00000366815 FBXO47Q5MNV8 452 aa12.61□□□□□ -0.39
H3F3A-203ENST00000366815 CCDC60Q8IWA6 550 aaPredicted RBP12.61□□□□□ -0.39
H3F3A-203ENST00000366815 ARMC2Q8NEN0 867 aa12.61□□□□□ -0.39
H3F3A-203ENST00000366815 CCDC148Q8NFR7 591 aa12.61□□□□□ -0.39
H3F3A-203ENST00000366815 BICD2Q8TD16 824 aa12.61□□□□□ -0.39
H3F3A-203ENST00000366815 GDPD5Q8WTR4 605 aa12.61□□□□□ -0.39
H3F3A-203ENST00000366815 LENG9Q96B70 501 aa12.61□□□□□ -0.39
H3F3A-203ENST00000366815 ZNF274Q96GC6 653 aaPredicted RBP12.61□□□□□ -0.39
H3F3A-203ENST00000366815 UPF3BQ9BZI7 483 aaKnown RBP12.61□□□□□ -0.39
H3F3A-203ENST00000366815 SH3GLB2Q9NR46 395 aa12.61□□□□□ -0.39
H3F3A-203ENST00000366815 LMCD1Q9NZU5 365 aa12.61□□□□□ -0.39
H3F3A-203ENST00000366815 MTUS1Q9ULD2 1270 aa12.61□□□□□ -0.39
H3F3A-203ENST00000366815 PCDHA2Q9Y5H9 948 aa12.61□□□□□ -0.39
H3F3A-203ENST00000366815 CDY2AQ9Y6F7 541 aa12.61□□□□□ -0.39
H3F3A-203ENST00000366815 ATP4AP20648 1035 aa12.6□□□□□ -0.39
H3F3A-203ENST00000366815 MRPS5P82675 430 aaKnown RBP12.6□□□□□ -0.39
H3F3A-203ENST00000366815 MCM6Q14566 821 aa12.6□□□□□ -0.39
H3F3A-203ENST00000366815 LCE2AQ5TA79 106 aaPredicted RBP12.6□□□□□ -0.39
H3F3A-203ENST00000366815 PTCRAQ6ISU1 281 aaPredicted RBP12.6□□□□□ -0.39
H3F3A-203ENST00000366815 TSHZ1Q6ZSZ6 1077 aa12.6□□□□□ -0.39
H3F3A-203ENST00000366815 ATP8B4Q8TF62 1192 aa12.6□□□□□ -0.39
H3F3A-203ENST00000366815 TNPO1Q92973 898 aaKnown RBP12.6□□□□□ -0.39
H3F3A-203ENST00000366815 UIMC1Q96RL1 719 aa12.6□□□□□ -0.39
H3F3A-203ENST00000366815 C17orf80Q9BSJ5 609 aa12.6□□□□□ -0.39
H3F3A-203ENST00000366815 ZNF577Q9BSK1 485 aa12.6□□□□□ -0.39
H3F3A-203ENST00000366815 FAM49AQ9H0Q0 323 aaPredicted RBP12.6□□□□□ -0.39
H3F3A-203ENST00000366815 AGO3Q9H9G7 860 aaKnown RBP12.6□□□□□ -0.39
H3F3A-203ENST00000366815 TBC1D22BQ9NU19 505 aa12.6□□□□□ -0.39
H3F3A-203ENST00000366815 PPP4R2Q9NY27 417 aa12.6□□□□□ -0.39
H3F3A-203ENST00000366815 SQORQ9Y6N5 450 aa12.6□□□□□ -0.39
H3F3A-203ENST00000366815 COL1A2P08123 1366 aa12.59□□□□□ -0.39
H3F3A-203ENST00000366815 XIRP2A4UGR9 3374 aa12.59□□□□□ -0.39
H3F3A-203ENST00000366815 ATG2AQ2TAZ0 1938 aa12.59□□□□□ -0.39
H3F3A-203ENST00000366815 BRWD1Q9NSI6 2320 aa12.59□□□□□ -0.39
H3F3A-203ENST00000366815 SMIM35A0A1B0GVV1 85 aa12.59□□□□□ -0.39
H3F3A-203ENST00000366815 ZBTB42B2RXF5 422 aa12.59□□□□□ -0.39
H3F3A-203ENST00000366815 BACH1O14867 736 aa12.59□□□□□ -0.39
H3F3A-203ENST00000366815 HBP1O60381 514 aa12.59□□□□□ -0.39
H3F3A-203ENST00000366815 UPP2O95045 317 aa12.59□□□□□ -0.39
H3F3A-203ENST00000366815 TFF2Q03403 129 aa12.59□□□□□ -0.39
H3F3A-203ENST00000366815 PRR16Q569H4 304 aa12.59□□□□□ -0.39
H3F3A-203ENST00000366815 IER5Q5VY09 327 aa12.59□□□□□ -0.39
H3F3A-203ENST00000366815 FAM160B1Q5W0V3 765 aa12.59□□□□□ -0.39
H3F3A-203ENST00000366815 ZNF746Q6NUN9 644 aaPredicted RBP12.59□□□□□ -0.39
H3F3A-203ENST00000366815 MIS18BP1Q6P0N0 1132 aa12.59□□□□□ -0.39
H3F3A-203ENST00000366815 MTHFD1LQ6UB35 978 aa12.59□□□□□ -0.39
H3F3A-203ENST00000366815 LINC01599Q8WXQ3 324 aa12.59□□□□□ -0.39
H3F3A-203ENST00000366815 YME1L1Q96TA2 773 aa12.59□□□□□ -0.39
H3F3A-203ENST00000366815 RC3H2Q9HBD1 1191 aaKnown RBP12.59□□□□□ -0.39
H3F3A-203ENST00000366815 ZNF302Q9NR11 478 aa12.59□□□□□ -0.39
H3F3A-203ENST00000366815 TRPV2Q9Y5S1 764 aa12.59□□□□□ -0.39
H3F3A-203ENST00000366815 IGSF9BQ9UPX0 1349 aa12.59□□□□□ -0.39
H3F3A-203ENST00000366815 KDM3AQ9Y4C1 1321 aa12.59□□□□□ -0.39
H3F3A-203ENST00000366815 TCF20Q9UGU0 1960 aaKnown RBP12.58□□□□□ -0.4
H3F3A-203ENST00000366815 NCOR1O75376 2440 aa12.58□□□□□ -0.4
H3F3A-203ENST00000366815 MUC3AQ02505 3323 aa12.58□□□□□ -0.4
H3F3A-203ENST00000366815 M0R2N6 131 aa12.58□□□□□ -0.4
H3F3A-203ENST00000366815 ENPP3O14638 875 aa12.58□□□□□ -0.4
H3F3A-203ENST00000366815 LINC00271P0C7V0 271 aa12.58□□□□□ -0.4
H3F3A-203ENST00000366815 KLRC1P26715 233 aa12.58□□□□□ -0.4
H3F3A-203ENST00000366815 CD52P31358 61 aa12.58□□□□□ -0.4
H3F3A-203ENST00000366815 USP11P51784 963 aa12.58□□□□□ -0.4
H3F3A-203ENST00000366815 KRT76Q01546 638 aa12.58□□□□□ -0.4
H3F3A-203ENST00000366815 SSRP1Q08945 709 aaKnown RBP12.58□□□□□ -0.4
H3F3A-203ENST00000366815 TMEM62Q0P6H9 643 aa12.58□□□□□ -0.4
H3F3A-203ENST00000366815 NR6A1Q15406 480 aa12.58□□□□□ -0.4
H3F3A-203ENST00000366815 NPY5RQ15761 445 aa12.58□□□□□ -0.4
H3F3A-203ENST00000366815 EPC2Q52LR7 807 aa12.58□□□□□ -0.4
H3F3A-203ENST00000366815 ERICH6BQ5W0A0 696 aa12.58□□□□□ -0.4
H3F3A-203ENST00000366815 SWSAP1Q6NVH7 229 aa12.58□□□□□ -0.4
H3F3A-203ENST00000366815 PDXDC2PQ6P474 469 aa12.58□□□□□ -0.4
H3F3A-203ENST00000366815 SMAP1Q8IYB5 467 aaPredicted RBP12.58□□□□□ -0.4
H3F3A-203ENST00000366815 TRIM22Q8IYM9 498 aa12.58□□□□□ -0.4
H3F3A-203ENST00000366815 SAMD11Q96NU1 681 aa12.58□□□□□ -0.4
H3F3A-203ENST00000366815 CELF4Q9BZC1 486 aaKnown RBP12.58□□□□□ -0.4
H3F3A-203ENST00000366815 PDRG1Q9NUG6 133 aa12.58□□□□□ -0.4
H3F3A-203ENST00000366815 PCDHA4Q9UN74 947 aa12.58□□□□□ -0.4
H3F3A-203ENST00000366815 MAFBQ9Y5Q3 323 aaPredicted RBP12.58□□□□□ -0.4
H3F3A-203ENST00000366815 KIAA1671Q9BY89 1806 aa12.58□□□□□ -0.4
H3F3A-203ENST00000366815 CPLX1O14810 134 aa12.57□□□□□ -0.4
H3F3A-203ENST00000366815 MSH4O15457 936 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms