RNA–Protein interactions for RNA: ENST00000366769.7

CDC42BPA-205, Transcript of CDC42 binding protein kinase alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-205ENST00000366769 SLC38A10Q9HBR0 1119 aa11.79□□□□□ -0.52
CDC42BPA-205ENST00000366769 VPS54Q9P1Q0 977 aa11.79□□□□□ -0.52
CDC42BPA-205ENST00000366769 GOLGA8SH3BPF8 625 aa11.78□□□□□ -0.52
CDC42BPA-205ENST00000366769 GOLGA8MH3BSY2 632 aa11.78□□□□□ -0.52
CDC42BPA-205ENST00000366769 EHD4Q9H223 541 aa11.78□□□□□ -0.52
CDC42BPA-205ENST00000366769 GPR141Q7Z602 305 aa11.78□□□□□ -0.52
CDC42BPA-205ENST00000366769 CMTR1Q8N1G2 835 aaKnown RBP11.78□□□□□ -0.52
CDC42BPA-205ENST00000366769 PCDHB4Q9Y5E5 795 aa11.78□□□□□ -0.52
CDC42BPA-205ENST00000366769 GADL1Q6ZQY3 521 aa11.78□□□□□ -0.52
CDC42BPA-205ENST00000366769 BPIFA3Q9BQP9 254 aa11.78□□□□□ -0.52
CDC42BPA-205ENST00000366769 CCDC88CQ9P219 2028 aa11.78□□□□□ -0.52
CDC42BPA-205ENST00000366769 TMEM247A6NEH6 219 aa11.78□□□□□ -0.52
CDC42BPA-205ENST00000366769 PRDM1O75626 825 aa11.78□□□□□ -0.52
CDC42BPA-205ENST00000366769 SRGAP2BP0DMP2 458 aa11.78□□□□□ -0.52
CDC42BPA-205ENST00000366769 CTDSPL2Q05D32 466 aa11.78□□□□□ -0.52
CDC42BPA-205ENST00000366769 KDM4CQ9H3R0 1056 aa11.78□□□□□ -0.52
CDC42BPA-205ENST00000366769 ADA2Q9NZK5 511 aa11.78□□□□□ -0.52
CDC42BPA-205ENST00000366769 TESPA1A2RU30 521 aaPredicted RBP11.78□□□□□ -0.52
CDC42BPA-205ENST00000366769 VAMP4O75379 141 aa11.78□□□□□ -0.52
CDC42BPA-205ENST00000366769 RAPGEF3O95398 923 aa11.78□□□□□ -0.52
CDC42BPA-205ENST00000366769 RP1P56715 2156 aa11.78□□□□□ -0.52
CDC42BPA-205ENST00000366769 MESDQ14696 234 aa11.78□□□□□ -0.52
CDC42BPA-205ENST00000366769 KIAA1841Q6NSI8 718 aa11.78□□□□□ -0.52
CDC42BPA-205ENST00000366769 ADGRG1Q9Y653 693 aa11.78□□□□□ -0.52
CDC42BPA-205ENST00000366769 OCRLQ01968 901 aa11.78□□□□□ -0.52
CDC42BPA-205ENST00000366769 ADPGKQ9BRR6 497 aa11.78□□□□□ -0.52
CDC42BPA-205ENST00000366769 DDX47Q9H0S4 455 aaKnown RBP11.78□□□□□ -0.52
CDC42BPA-205ENST00000366769 TAF1DQ9H5J8 278 aaPredicted RBP11.78□□□□□ -0.52
CDC42BPA-205ENST00000366769 DDX56Q9NY93 547 aaKnown RBP11.78□□□□□ -0.52
CDC42BPA-205ENST00000366769 POTEB3A0JP26 581 aa11.78□□□□□ -0.52
CDC42BPA-205ENST00000366769 SMNDC1O75940 238 aaKnown RBP eCLIP11.78□□□□□ -0.52
CDC42BPA-205ENST00000366769 STAT1P42224 750 aa11.78□□□□□ -0.52
CDC42BPA-205ENST00000366769 POTEBQ6S5H4 581 aa11.78□□□□□ -0.52
CDC42BPA-205ENST00000366769 CCDC127Q96BQ5 260 aa11.78□□□□□ -0.52
CDC42BPA-205ENST00000366769 SAYSD1Q9NPB0 183 aa11.78□□□□□ -0.52
CDC42BPA-205ENST00000366769 GTPBP6O43824 516 aaPredicted RBP11.78□□□□□ -0.52
CDC42BPA-205ENST00000366769 SOX5P35711 763 aa11.78□□□□□ -0.52
CDC42BPA-205ENST00000366769 CRLF3Q8IUI8 442 aa11.78□□□□□ -0.52
CDC42BPA-205ENST00000366769 KIF17Q9P2E2 1029 aa11.78□□□□□ -0.52
CDC42BPA-205ENST00000366769 ARMCX3Q9UH62 379 aaPredicted RBP11.78□□□□□ -0.52
CDC42BPA-205ENST00000366769 ZMYM6O95789 1325 aa11.77□□□□□ -0.52
CDC42BPA-205ENST00000366769 ZNF654Q8IZM8 581 aa11.77□□□□□ -0.52
CDC42BPA-205ENST00000366769 ARMT1Q9H993 441 aa11.77□□□□□ -0.52
CDC42BPA-205ENST00000366769 RBM12Q9NTZ6 932 aaKnown RBP11.77□□□□□ -0.52
CDC42BPA-205ENST00000366769 SYNMO15061 1565 aa11.77□□□□□ -0.52
CDC42BPA-205ENST00000366769 TBC1D10BQ4KMP7 808 aaPredicted RBP11.77□□□□□ -0.52
CDC42BPA-205ENST00000366769 G2E3Q7L622 706 aa11.77□□□□□ -0.52
CDC42BPA-205ENST00000366769 BTN2A2Q8WVV5 523 aa11.77□□□□□ -0.52
CDC42BPA-205ENST00000366769 GRIP2Q9C0E4 1043 aa11.77□□□□□ -0.52
CDC42BPA-205ENST00000366769 IL1RAPL1Q9NZN1 696 aa11.77□□□□□ -0.52
CDC42BPA-205ENST00000366769 UBAP1LF5GYI3 381 aa11.77□□□□□ -0.52
CDC42BPA-205ENST00000366769 PMS2P54278 862 aa11.77□□□□□ -0.52
CDC42BPA-205ENST00000366769 SULF1Q8IWU6 871 aa11.77□□□□□ -0.52
CDC42BPA-205ENST00000366769 POLR2BP30876 1174 aaKnown RBP11.77□□□□□ -0.53
CDC42BPA-205ENST00000366769 WASHC5Q12768 1159 aa11.77□□□□□ -0.53
CDC42BPA-205ENST00000366769 PRR23CQ6ZRP0 262 aa11.77□□□□□ -0.53
CDC42BPA-205ENST00000366769 ZBTB8OSQ8IWT0 167 aa11.77□□□□□ -0.53
CDC42BPA-205ENST00000366769 ZSWIM6Q9HCJ5 1215 aa11.77□□□□□ -0.53
CDC42BPA-205ENST00000366769 EURLQ9NYK6 297 aa11.77□□□□□ -0.53
CDC42BPA-205ENST00000366769 GCNT4Q9P109 453 aa11.77□□□□□ -0.53
CDC42BPA-205ENST00000366769 LINC00854A0A1B0GVQ3 168 aa11.77□□□□□ -0.53
CDC42BPA-205ENST00000366769 HSPD1P10809 573 aaKnown RBP11.77□□□□□ -0.53
CDC42BPA-205ENST00000366769 KCNA1Q09470 495 aa11.77□□□□□ -0.53
CDC42BPA-205ENST00000366769 C16orf72Q14CZ0 275 aa11.77□□□□□ -0.53
CDC42BPA-205ENST00000366769 ABI1Q8IZP0 508 aa11.77□□□□□ -0.53
CDC42BPA-205ENST00000366769 LARGE2Q8N3Y3 721 aa11.77□□□□□ -0.53
CDC42BPA-205ENST00000366769 PPP1R36Q96LQ0 422 aa11.77□□□□□ -0.53
CDC42BPA-205ENST00000366769 CSRNP1Q96S65 589 aa11.77□□□□□ -0.53
CDC42BPA-205ENST00000366769 TRIM51Q9BSJ1 452 aa11.77□□□□□ -0.53
CDC42BPA-205ENST00000366769 PARVBQ9HBI1 364 aa11.77□□□□□ -0.53
CDC42BPA-205ENST00000366769 TTC21BQ7Z4L5 1316 aa11.77□□□□□ -0.53
CDC42BPA-205ENST00000366769 GNPATO15228 680 aa11.77□□□□□ -0.53
CDC42BPA-205ENST00000366769 GET4Q7L5D6 327 aaPredicted RBP11.77□□□□□ -0.53
CDC42BPA-205ENST00000366769 ZIM3Q96PE6 472 aa11.77□□□□□ -0.53
CDC42BPA-205ENST00000366769 K7ENM7 598 aa11.77□□□□□ -0.53
CDC42BPA-205ENST00000366769 OASLQ15646 514 aaKnown RBP11.77□□□□□ -0.53
CDC42BPA-205ENST00000366769 KIF19Q2TAC6 998 aa11.77□□□□□ -0.53
CDC42BPA-205ENST00000366769 ZNF467Q7Z7K2 595 aaPredicted RBP11.77□□□□□ -0.53
CDC42BPA-205ENST00000366769 PRG4Q92954 1404 aaPredicted RBP11.77□□□□□ -0.53
CDC42BPA-205ENST00000366769 KDM7AQ6ZMT4 941 aa11.77□□□□□ -0.53
CDC42BPA-205ENST00000366769 GPBP1Q86WP2 473 aa11.77□□□□□ -0.53
CDC42BPA-205ENST00000366769 GAPVD1Q14C86 1478 aa11.77□□□□□ -0.53
CDC42BPA-205ENST00000366769 LRRIQ4A6NIV6 560 aa11.77□□□□□ -0.53
CDC42BPA-205ENST00000366769 ADAM33Q9BZ11 813 aa11.77□□□□□ -0.53
CDC42BPA-205ENST00000366769 RHOBTB1O94844 696 aa11.76□□□□□ -0.53
CDC42BPA-205ENST00000366769 IZUMO2Q6UXV1 221 aa11.76□□□□□ -0.53
CDC42BPA-205ENST00000366769 CCNYQ8ND76 341 aa11.76□□□□□ -0.53
CDC42BPA-205ENST00000366769 FBXO9Q9UK97 447 aaPredicted RBP11.76□□□□□ -0.53
CDC42BPA-205ENST00000366769 GALK1P51570 392 aa11.76□□□□□ -0.53
CDC42BPA-205ENST00000366769 ATG16L1Q676U5 607 aa11.76□□□□□ -0.53
CDC42BPA-205ENST00000366769 TSR3Q9UJK0 312 aaKnown RBP11.76□□□□□ -0.53
CDC42BPA-205ENST00000366769 UHRF1BP1Q6BDS2 1440 aa11.76□□□□□ -0.53
CDC42BPA-205ENST00000366769 UBN2Q6ZU65 1347 aa11.76□□□□□ -0.53
CDC42BPA-205ENST00000366769 XRCC5P13010 732 aaKnown RBP11.76□□□□□ -0.53
CDC42BPA-205ENST00000366769 DYNLT1P63172 113 aa11.76□□□□□ -0.53
CDC42BPA-205ENST00000366769 ITGB1BP2Q9UKP3 347 aa11.76□□□□□ -0.53
CDC42BPA-205ENST00000366769 VIL1P09327 827 aaKnown RBP11.76□□□□□ -0.53
CDC42BPA-205ENST00000366769 MYBL2P10244 700 aa11.76□□□□□ -0.53
CDC42BPA-205ENST00000366769 DCTN2Q13561 401 aaKnown RBP11.76□□□□□ -0.53
CDC42BPA-205ENST00000366769 ZNF554Q86TJ5 538 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms