RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 TRIM9Q9C026 710 aa12.88□□□□□ -0.35
CDC42BPA-203ENST00000366766 HOXC10Q9NYD6 342 aa12.88□□□□□ -0.35
CDC42BPA-203ENST00000366766 NUB1Q9Y5A7 615 aa12.88□□□□□ -0.35
CDC42BPA-203ENST00000366766 ZFXP17010 805 aaPredicted RBP12.88□□□□□ -0.35
CDC42BPA-203ENST00000366766 PHKA2P46019 1235 aa12.88□□□□□ -0.35
CDC42BPA-203ENST00000366766 PPP2R2AP63151 447 aa12.88□□□□□ -0.35
CDC42BPA-203ENST00000366766 IFRD2Q12894 506 aaPredicted RBP12.88□□□□□ -0.35
CDC42BPA-203ENST00000366766 ERICH1Q86X53 443 aa12.88□□□□□ -0.35
CDC42BPA-203ENST00000366766 WDR75Q8IWA0 830 aaKnown RBP12.88□□□□□ -0.35
CDC42BPA-203ENST00000366766 DNAJC12Q9UKB3 198 aa12.88□□□□□ -0.35
CDC42BPA-203ENST00000366766 PSMA2P25787 234 aa12.87□□□□□ -0.35
CDC42BPA-203ENST00000366766 RNF207Q6ZRF8 634 aa12.87□□□□□ -0.35
CDC42BPA-203ENST00000366766 CYB5R4Q7L1T6 521 aa12.87□□□□□ -0.35
CDC42BPA-203ENST00000366766 STOML1Q9UBI4 398 aa12.87□□□□□ -0.35
CDC42BPA-203ENST00000366766 TRIM68Q6AZZ1 485 aa12.87□□□□□ -0.35
CDC42BPA-203ENST00000366766 NUDCD1Q96RS6 583 aa12.87□□□□□ -0.35
CDC42BPA-203ENST00000366766 DNAAF3Q8N9W5 541 aa12.87□□□□□ -0.35
CDC42BPA-203ENST00000366766 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.87□□□□□ -0.35
CDC42BPA-203ENST00000366766 HGSO14964 777 aaPredicted RBP12.87□□□□□ -0.35
CDC42BPA-203ENST00000366766 QARSP47897 775 aaKnown RBP12.87□□□□□ -0.35
CDC42BPA-203ENST00000366766 TXNRD1Q16881 649 aa12.87□□□□□ -0.35
CDC42BPA-203ENST00000366766 INTUQ9ULD6 942 aa12.87□□□□□ -0.35
CDC42BPA-203ENST00000366766 CYP19A1P11511 503 aaPredicted RBP12.87□□□□□ -0.35
CDC42BPA-203ENST00000366766 BASP1P80723 227 aaKnown RBP12.87□□□□□ -0.35
CDC42BPA-203ENST00000366766 PADI6Q6TGC4 694 aa12.87□□□□□ -0.35
CDC42BPA-203ENST00000366766 CEP95Q96GE4 821 aa12.87□□□□□ -0.35
CDC42BPA-203ENST00000366766 IP6K2Q9UHH9 426 aa12.87□□□□□ -0.35
CDC42BPA-203ENST00000366766 ANAPC7Q9UJX3 599 aa12.87□□□□□ -0.35
CDC42BPA-203ENST00000366766 MYOM1P52179 1685 aa12.87□□□□□ -0.35
CDC42BPA-203ENST00000366766 CLIC2O15247 247 aa12.87□□□□□ -0.35
CDC42BPA-203ENST00000366766 CHEK2O96017 543 aa12.87□□□□□ -0.35
CDC42BPA-203ENST00000366766 SATB1Q01826 763 aa12.87□□□□□ -0.35
CDC42BPA-203ENST00000366766 ZBTB17Q13105 803 aa12.87□□□□□ -0.35
CDC42BPA-203ENST00000366766 TEDDM1Q5T9Z0 273 aa12.87□□□□□ -0.35
CDC42BPA-203ENST00000366766 CDC42EP1Q00587 391 aa12.87□□□□□ -0.35
CDC42BPA-203ENST00000366766 RAPH1Q70E73 1250 aa12.87□□□□□ -0.35
CDC42BPA-203ENST00000366766 NSUN6Q8TEA1 469 aaKnown RBP12.87□□□□□ -0.35
CDC42BPA-203ENST00000366766 PPP1R2P1Q96PQ5 205 aa12.87□□□□□ -0.35
CDC42BPA-203ENST00000366766 AP5M1Q9H0R1 490 aa12.87□□□□□ -0.35
CDC42BPA-203ENST00000366766 TRPV6Q9H1D0 765 aa12.87□□□□□ -0.35
CDC42BPA-203ENST00000366766 TTC26A0AVF1 554 aa12.87□□□□□ -0.35
CDC42BPA-203ENST00000366766 ESYT2A0FGR8 921 aa12.87□□□□□ -0.35
CDC42BPA-203ENST00000366766 GMNCA6NCL1 334 aa12.87□□□□□ -0.35
CDC42BPA-203ENST00000366766 RHOBTB3O94955 611 aa12.87□□□□□ -0.35
CDC42BPA-203ENST00000366766 LRIG3Q6UXM1 1119 aa12.87□□□□□ -0.35
CDC42BPA-203ENST00000366766 SNF8Q96H20 258 aa12.87□□□□□ -0.35
CDC42BPA-203ENST00000366766 LRRC37BQ96QE4 947 aa12.87□□□□□ -0.35
CDC42BPA-203ENST00000366766 PITPNM3Q9BZ71 974 aa12.87□□□□□ -0.35
CDC42BPA-203ENST00000366766 MAGEB5Q9BZ81 275 aa12.87□□□□□ -0.35
CDC42BPA-203ENST00000366766 UVRAGQ9P2Y5 699 aa12.87□□□□□ -0.35
CDC42BPA-203ENST00000366766 SHC4Q6S5L8 630 aa12.86□□□□□ -0.35
CDC42BPA-203ENST00000366766 BRINP3Q76B58 766 aa12.86□□□□□ -0.35
CDC42BPA-203ENST00000366766 DPP9Q86TI2 863 aa12.86□□□□□ -0.35
CDC42BPA-203ENST00000366766 ATP11CQ8NB49 1132 aa12.86□□□□□ -0.35
CDC42BPA-203ENST00000366766 CLDN3O15551 220 aa12.86□□□□□ -0.35
CDC42BPA-203ENST00000366766 ASAP2O43150 1006 aa12.86□□□□□ -0.35
CDC42BPA-203ENST00000366766 ZBTB24O43167 697 aaPredicted RBP12.86□□□□□ -0.35
CDC42BPA-203ENST00000366766 SOX5P35711 763 aa12.86□□□□□ -0.35
CDC42BPA-203ENST00000366766 EFNA5P52803 228 aa12.86□□□□□ -0.35
CDC42BPA-203ENST00000366766 DYNLL2Q96FJ2 89 aa12.86□□□□□ -0.35
CDC42BPA-203ENST00000366766 TAC1P20366 129 aa12.86□□□□□ -0.35
CDC42BPA-203ENST00000366766 MAPK6Q16659 721 aa12.86□□□□□ -0.35
CDC42BPA-203ENST00000366766 CPS1P31327 1500 aa12.86□□□□□ -0.35
CDC42BPA-203ENST00000366766 MYH8P13535 1937 aa12.86□□□□□ -0.35
CDC42BPA-203ENST00000366766 GUCY2CP25092 1073 aa12.86□□□□□ -0.35
CDC42BPA-203ENST00000366766 XRRA1Q6P2D8 792 aa12.86□□□□□ -0.35
CDC42BPA-203ENST00000366766 RHOT1Q8IXI2 618 aa12.86□□□□□ -0.35
CDC42BPA-203ENST00000366766 SH3RF3Q8TEJ3 882 aaPredicted RBP12.86□□□□□ -0.35
CDC42BPA-203ENST00000366766 ALKBH8Q96BT7 664 aaKnown RBP12.86□□□□□ -0.35
CDC42BPA-203ENST00000366766 PCDHA6Q9UN73 950 aa12.86□□□□□ -0.35
CDC42BPA-203ENST00000366766 PCDHA8Q9Y5H6 950 aa12.86□□□□□ -0.35
CDC42BPA-203ENST00000366766 GNAT1P11488 350 aa12.86□□□□□ -0.35
CDC42BPA-203ENST00000366766 SLC18A3Q16572 532 aa12.86□□□□□ -0.35
CDC42BPA-203ENST00000366766 ZNF449Q6P9G9 518 aa12.86□□□□□ -0.35
CDC42BPA-203ENST00000366766 ATG9AQ7Z3C6 839 aa12.86□□□□□ -0.35
CDC42BPA-203ENST00000366766 KCNB2Q92953 911 aa12.86□□□□□ -0.35
CDC42BPA-203ENST00000366766 HDAC11Q96DB2 347 aa12.86□□□□□ -0.35
CDC42BPA-203ENST00000366766 METTL16Q86W50 562 aaKnown RBP12.86□□□□□ -0.35
CDC42BPA-203ENST00000366766 RMDN3Q96TC7 470 aa12.86□□□□□ -0.35
CDC42BPA-203ENST00000366766 SNX12Q9UMY4 172 aa12.86□□□□□ -0.35
CDC42BPA-203ENST00000366766 BAG2O95816 211 aa12.86□□□□□ -0.35
CDC42BPA-203ENST00000366766 RASIP1Q5U651 963 aa12.86□□□□□ -0.35
CDC42BPA-203ENST00000366766 EPM2AIP1Q7L775 607 aaPredicted RBP12.86□□□□□ -0.35
CDC42BPA-203ENST00000366766 TTLL6Q8N841 843 aa12.86□□□□□ -0.35
CDC42BPA-203ENST00000366766 HNRNPLLQ8WVV9 542 aaKnown RBP12.86□□□□□ -0.35
CDC42BPA-203ENST00000366766 MKNK1Q9BUB5 465 aa12.86□□□□□ -0.35
CDC42BPA-203ENST00000366766 FBXO2Q9UK22 296 aaPredicted RBP12.86□□□□□ -0.35
CDC42BPA-203ENST00000366766 PITPNM2Q9BZ72 1349 aa12.86□□□□□ -0.35
CDC42BPA-203ENST00000366766 KIF1AQ12756 1690 aa12.86□□□□□ -0.35
CDC42BPA-203ENST00000366766 USP17L5A8MUK1 530 aa12.86□□□□□ -0.35
CDC42BPA-203ENST00000366766 P4HA2O15460 535 aa12.86□□□□□ -0.35
CDC42BPA-203ENST00000366766 CCDC24Q8N4L8 307 aa12.86□□□□□ -0.35
CDC42BPA-203ENST00000366766 C3orf20Q8ND61 904 aa12.86□□□□□ -0.35
CDC42BPA-203ENST00000366766 NOVA2Q9UNW9 492 aaKnown RBP12.86□□□□□ -0.35
CDC42BPA-203ENST00000366766 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.86□□□□□ -0.35
CDC42BPA-203ENST00000366766 RASA4BC9J798 803 aa12.85□□□□□ -0.35
CDC42BPA-203ENST00000366766 RASA4O43374 803 aa12.85□□□□□ -0.35
CDC42BPA-203ENST00000366766 P4HBP07237 508 aaKnown RBP12.85□□□□□ -0.35
CDC42BPA-203ENST00000366766 PSMC5P62195 406 aa12.85□□□□□ -0.35
CDC42BPA-203ENST00000366766 BYSLQ13895 437 aaKnown RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms