RNA–Protein interactions for RNA: ENST00000362409.1

RNU6-661P-201, Transcript of RNA, U6 small nuclear 661, pseudogene, humanhuman

BASIC

Gene RNU6-661P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-661P-201ENST00000362409 PRAMEF18Q5VWM3 479 aa2.31□□□□□ -2.04
RNU6-661P-201ENST00000362409 MRM1Q6IN84 353 aaKnown RBP2.31□□□□□ -2.04
RNU6-661P-201ENST00000362409 RUFY4Q6ZNE9 571 aa2.31□□□□□ -2.04
RNU6-661P-201ENST00000362409 TMC6Q7Z403 805 aa2.31□□□□□ -2.04
RNU6-661P-201ENST00000362409 LRP10Q7Z4F1 713 aa2.31□□□□□ -2.04
RNU6-661P-201ENST00000362409 DDX42Q86XP3 938 aaKnown RBP eCLIP2.31□□□□□ -2.04
RNU6-661P-201ENST00000362409 SMC5Q8IY18 1101 aa2.31□□□□□ -2.04
RNU6-661P-201ENST00000362409 NIM1KQ8IY84 436 aa2.31□□□□□ -2.04
RNU6-661P-201ENST00000362409 C2orf69Q8N8R5 385 aa2.31□□□□□ -2.04
RNU6-661P-201ENST00000362409 DDX1Q92499 740 aaKnown RBP2.31□□□□□ -2.04
RNU6-661P-201ENST00000362409 DPF3Q92784 378 aa2.31□□□□□ -2.04
RNU6-661P-201ENST00000362409 TMEM87BQ96K49 555 aa2.31□□□□□ -2.04
RNU6-661P-201ENST00000362409 RPS6KC1Q96S38 1066 aa2.31□□□□□ -2.04
RNU6-661P-201ENST00000362409 SPATA25Q9BR10 227 aa2.31□□□□□ -2.04
RNU6-661P-201ENST00000362409 ARHGAP39Q9C0H5 1083 aa2.31□□□□□ -2.04
RNU6-661P-201ENST00000362409 KCNQ5Q9NR82 932 aa2.31□□□□□ -2.04
RNU6-661P-201ENST00000362409 CHST12Q9NRB3 414 aa2.31□□□□□ -2.04
RNU6-661P-201ENST00000362409 TYW1Q9NV66 732 aaKnown RBP2.31□□□□□ -2.04
RNU6-661P-201ENST00000362409 USP40Q9NVE5 1235 aa2.31□□□□□ -2.04
RNU6-661P-201ENST00000362409 SMPD4Q9NXE4 827 aa2.31□□□□□ -2.04
RNU6-661P-201ENST00000362409 PPP4R2Q9NY27 417 aa2.31□□□□□ -2.04
RNU6-661P-201ENST00000362409 GGA3Q9NZ52 723 aa2.31□□□□□ -2.04
RNU6-661P-201ENST00000362409 KLHL14Q9P2G3 628 aa2.31□□□□□ -2.04
RNU6-661P-201ENST00000362409 MAGEC2Q9UBF1 373 aaPredicted RBP2.31□□□□□ -2.04
RNU6-661P-201ENST00000362409 CNOT7Q9UIV1 285 aaKnown RBP2.31□□□□□ -2.04
RNU6-661P-201ENST00000362409 ZNRF3Q9ULT6 936 aa2.31□□□□□ -2.04
RNU6-661P-201ENST00000362409 ATP8A1Q9Y2Q0 1164 aa2.31□□□□□ -2.04
RNU6-661P-201ENST00000362409 ZNF281Q9Y2X9 895 aa2.31□□□□□ -2.04
RNU6-661P-201ENST00000362409 SAMM50Q9Y512 469 aa2.31□□□□□ -2.04
RNU6-661P-201ENST00000362409 PCDHB5Q9Y5E4 795 aa2.31□□□□□ -2.04
RNU6-661P-201ENST00000362409 PCDHA5Q9Y5H7 936 aa2.31□□□□□ -2.04
RNU6-661P-201ENST00000362409 TACC3Q9Y6A5 838 aa2.31□□□□□ -2.04
RNU6-661P-201ENST00000362409 CDHR2Q9BYE9 1310 aa2.31□□□□□ -2.04
RNU6-661P-201ENST00000362409 KIF24Q5T7B8 1368 aa2.31□□□□□ -2.04
RNU6-661P-201ENST00000362409 RAB3GAP2Q9H2M9 1393 aa2.31□□□□□ -2.04
RNU6-661P-201ENST00000362409 FAM186AA6NE01 2351 aa2.31□□□□□ -2.04
RNU6-661P-201ENST00000362409 USP9XQ93008 2570 aaPredicted RBP2.31□□□□□ -2.04
RNU6-661P-201ENST00000362409 COL4A1P02462 1669 aa2.31□□□□□ -2.04
RNU6-661P-201ENST00000362409 BRWD1Q9NSI6 2320 aa2.3□□□□□ -2.04
RNU6-661P-201ENST00000362409 FRYQ5TBA9 3013 aa2.3□□□□□ -2.04
RNU6-661P-201ENST00000362409 PRAMEF22A3QJZ6 481 aa2.3□□□□□ -2.04
RNU6-661P-201ENST00000362409 GFRA2O00451 464 aa2.3□□□□□ -2.04
RNU6-661P-201ENST00000362409 TSPAN6O43657 245 aa2.3□□□□□ -2.04
RNU6-661P-201ENST00000362409 NRDCO43847 1150 aa2.3□□□□□ -2.04
RNU6-661P-201ENST00000362409 KATNA1O75449 491 aa2.3□□□□□ -2.04
RNU6-661P-201ENST00000362409 SCGB1D2O95969 90 aa2.3□□□□□ -2.04
RNU6-661P-201ENST00000362409 PLA2G1BP04054 148 aaKnown RBP2.3□□□□□ -2.04
RNU6-661P-201ENST00000362409 PGRP06401 933 aa2.3□□□□□ -2.04
RNU6-661P-201ENST00000362409 MYCLP1P12525 358 aaPredicted RBP2.3□□□□□ -2.04
RNU6-661P-201ENST00000362409 ZNF20P17024 532 aa2.3□□□□□ -2.04
RNU6-661P-201ENST00000362409 RPL10P27635 214 aaKnown RBP2.3□□□□□ -2.04
RNU6-661P-201ENST00000362409 CTGFP29279 349 aa2.3□□□□□ -2.04
RNU6-661P-201ENST00000362409 GNALP38405 381 aa2.3□□□□□ -2.04
RNU6-661P-201ENST00000362409 ST5P78524 1137 aa2.3□□□□□ -2.04
RNU6-661P-201ENST00000362409 LMNB2Q03252 620 aa2.3□□□□□ -2.04
RNU6-661P-201ENST00000362409 CLCQ05315 142 aa2.3□□□□□ -2.04
RNU6-661P-201ENST00000362409 SSRP1Q08945 709 aaKnown RBP2.3□□□□□ -2.04
RNU6-661P-201ENST00000362409 CBX2Q14781 532 aaPredicted RBP2.3□□□□□ -2.04
RNU6-661P-201ENST00000362409 TCEA2Q15560 299 aa2.3□□□□□ -2.04
RNU6-661P-201ENST00000362409 SLC4A8Q2Y0W8 1093 aa2.3□□□□□ -2.04
RNU6-661P-201ENST00000362409 SLC9C1Q4G0N8 1177 aa2.3□□□□□ -2.04
RNU6-661P-201ENST00000362409 VWA3BQ502W6 1294 aa2.3□□□□□ -2.04
RNU6-661P-201ENST00000362409 TNNI3KQ59H18 835 aa2.3□□□□□ -2.04
RNU6-661P-201ENST00000362409 SYCP2LQ5T4T6 812 aa2.3□□□□□ -2.04
RNU6-661P-201ENST00000362409 TTBK2Q6IQ55 1244 aa2.3□□□□□ -2.04
RNU6-661P-201ENST00000362409 ZNF530Q6P9A1 599 aaPredicted RBP2.3□□□□□ -2.04
RNU6-661P-201ENST00000362409 C6orf15Q6UXA7 325 aaPredicted RBP2.3□□□□□ -2.04
RNU6-661P-201ENST00000362409 ZPBP2Q6X784 338 aa2.3□□□□□ -2.04
RNU6-661P-201ENST00000362409 GK5Q6ZS86 529 aa2.3□□□□□ -2.04
RNU6-661P-201ENST00000362409 CEP128Q6ZU80 1094 aa2.3□□□□□ -2.04
RNU6-661P-201ENST00000362409 HDGFL2Q7Z4V5 671 aaPredicted RBP2.3□□□□□ -2.04
RNU6-661P-201ENST00000362409 NBPF5PQ86XG9 351 aaPredicted RBP2.3□□□□□ -2.04
RNU6-661P-201ENST00000362409 THNSL2Q86YJ6 484 aa2.3□□□□□ -2.04
RNU6-661P-201ENST00000362409 SLITRK4Q8IW52 837 aa2.3□□□□□ -2.04
RNU6-661P-201ENST00000362409 MRPL41Q8IXM3 137 aaKnown RBP2.3□□□□□ -2.04
RNU6-661P-201ENST00000362409 MAFAQ8NHW3 353 aaPredicted RBP2.3□□□□□ -2.04
RNU6-661P-201ENST00000362409 DIS3LQ8TF46 1054 aaKnown RBP2.3□□□□□ -2.04
RNU6-661P-201ENST00000362409 THAP3Q8WTV1 239 aaPredicted RBP2.3□□□□□ -2.04
RNU6-661P-201ENST00000362409 JARID2Q92833 1246 aaPredicted RBP2.3□□□□□ -2.04
RNU6-661P-201ENST00000362409 CLMNQ96JQ2 1002 aa2.3□□□□□ -2.04
RNU6-661P-201ENST00000362409 C8orf48Q96LL4 319 aa2.3□□□□□ -2.04
RNU6-661P-201ENST00000362409 C8orf49Q96NF6 230 aa2.3□□□□□ -2.04
RNU6-661P-201ENST00000362409 FERD3LQ96RJ6 166 aa2.3□□□□□ -2.04
RNU6-661P-201ENST00000362409 CEP89Q96ST8 783 aa2.3□□□□□ -2.04
RNU6-661P-201ENST00000362409 CDX2Q99626 313 aaPredicted RBP2.3□□□□□ -2.04
RNU6-661P-201ENST00000362409 SMAD5Q99717 465 aaKnown RBP2.3□□□□□ -2.04
RNU6-661P-201ENST00000362409 PTPN18Q99952 460 aa2.3□□□□□ -2.04
RNU6-661P-201ENST00000362409 RTFDC1Q9BY42 306 aaPredicted RBP2.3□□□□□ -2.04
RNU6-661P-201ENST00000362409 CEP44Q9C0F1 390 aa2.3□□□□□ -2.04
RNU6-661P-201ENST00000362409 PRDM14Q9GZV8 571 aa2.3□□□□□ -2.04
RNU6-661P-201ENST00000362409 ANTXR1Q9H6X2 564 aa2.3□□□□□ -2.04
RNU6-661P-201ENST00000362409 CRTAC1Q9NQ79 661 aa2.3□□□□□ -2.04
RNU6-661P-201ENST00000362409 CNOT11Q9UKZ1 510 aaKnown RBP2.3□□□□□ -2.04
RNU6-661P-201ENST00000362409 ZMYND8Q9ULU4 1186 aaPredicted RBP2.3□□□□□ -2.04
RNU6-661P-201ENST00000362409 PLA2G2DQ9UNK4 145 aa2.3□□□□□ -2.04
RNU6-661P-201ENST00000362409 FZD1Q9UP38 647 aa2.3□□□□□ -2.04
RNU6-661P-201ENST00000362409 CEP131Q9UPN4 1083 aa2.3□□□□□ -2.04
RNU6-661P-201ENST00000362409 SNCAIPQ9Y6H5 919 aa2.3□□□□□ -2.04
RNU6-661P-201ENST00000362409 WASHC2AQ641Q2 1341 aa2.3□□□□□ -2.04
RNU6-661P-201ENST00000362409 IRS2Q9Y4H2 1338 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms