RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 TAOK1Q7L7X3 1001 aa13.71□□□□□ -0.22
VAMP1-201ENST00000361716 UCMAQ8WVF2 138 aa13.71□□□□□ -0.22
VAMP1-201ENST00000361716 ZNF512BQ96KM6 892 aaPredicted RBP13.71□□□□□ -0.22
VAMP1-201ENST00000361716 A0A1W2PRG0 241 aa13.7□□□□□ -0.22
VAMP1-201ENST00000361716 TMEM120BA0PK00 339 aa13.7□□□□□ -0.22
VAMP1-201ENST00000361716 ASAP2O43150 1006 aa13.7□□□□□ -0.22
VAMP1-201ENST00000361716 ENTPD5O75356 428 aa13.7□□□□□ -0.22
VAMP1-201ENST00000361716 RTN3O95197 1032 aaPredicted RBP13.7□□□□□ -0.22
VAMP1-201ENST00000361716 UBTFL6P0CB48 400 aaPredicted RBP13.7□□□□□ -0.22
VAMP1-201ENST00000361716 SERPINB4P48594 390 aa13.7□□□□□ -0.22
VAMP1-201ENST00000361716 ITPK1Q13572 414 aa13.7□□□□□ -0.22
VAMP1-201ENST00000361716 ZFYVE27Q5T4F4 411 aa13.7□□□□□ -0.22
VAMP1-201ENST00000361716 HGSNATQ68CP4 663 aa13.7□□□□□ -0.22
VAMP1-201ENST00000361716 ANO7Q6IWH7 933 aa13.7□□□□□ -0.22
VAMP1-201ENST00000361716 APBB1IPQ7Z5R6 666 aaPredicted RBP13.7□□□□□ -0.22
VAMP1-201ENST00000361716 TTC8Q8TAM2 541 aa13.7□□□□□ -0.22
VAMP1-201ENST00000361716 ERP27Q96DN0 273 aa13.7□□□□□ -0.22
VAMP1-201ENST00000361716 PBKQ96KB5 322 aa13.7□□□□□ -0.22
VAMP1-201ENST00000361716 RMDN2Q96LZ7 410 aa13.7□□□□□ -0.22
VAMP1-201ENST00000361716 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.7□□□□□ -0.22
VAMP1-201ENST00000361716 SPATA31A5Q5VU36 1347 aa13.7□□□□□ -0.22
VAMP1-201ENST00000361716 SPATA31A7Q8IWB4 1347 aa13.7□□□□□ -0.22
VAMP1-201ENST00000361716 GSTTP1A0A1W2PQM5 241 aa13.7□□□□□ -0.22
VAMP1-201ENST00000361716 USP17L5A8MUK1 530 aa13.7□□□□□ -0.22
VAMP1-201ENST00000361716 GH1P01241 217 aa13.7□□□□□ -0.22
VAMP1-201ENST00000361716 ZCCHC18P0CG32 403 aa13.7□□□□□ -0.22
VAMP1-201ENST00000361716 IL6STP40189 918 aaPredicted RBP13.7□□□□□ -0.22
VAMP1-201ENST00000361716 EIF3BP55884 814 aaKnown RBP13.7□□□□□ -0.22
VAMP1-201ENST00000361716 KCNMA1Q12791 1236 aa13.7□□□□□ -0.22
VAMP1-201ENST00000361716 CAPN12Q6ZSI9 719 aa13.7□□□□□ -0.22
VAMP1-201ENST00000361716 TRIM74Q86UV6 250 aa13.7□□□□□ -0.22
VAMP1-201ENST00000361716 TRIM73Q86UV7 250 aa13.7□□□□□ -0.22
VAMP1-201ENST00000361716 GPBP1Q86WP2 473 aa13.7□□□□□ -0.22
VAMP1-201ENST00000361716 TNFRSF25Q93038 417 aa13.7□□□□□ -0.22
VAMP1-201ENST00000361716 TGS1Q96RS0 853 aaKnown RBP13.7□□□□□ -0.22
VAMP1-201ENST00000361716 QTRT2Q9H974 415 aaKnown RBP13.7□□□□□ -0.22
VAMP1-201ENST00000361716 RGL1Q9NZL6 768 aa13.7□□□□□ -0.22
VAMP1-201ENST00000361716 AMFRQ9UKV5 643 aa13.7□□□□□ -0.22
VAMP1-201ENST00000361716 ZNF652Q9Y2D9 606 aa13.7□□□□□ -0.22
VAMP1-201ENST00000361716 LOC102724428A0A0B4J2F2 783 aa13.7□□□□□ -0.22
VAMP1-201ENST00000361716 G3V3G9 751 aa13.7□□□□□ -0.22
VAMP1-201ENST00000361716 PJA2O43164 708 aa13.7□□□□□ -0.22
VAMP1-201ENST00000361716 SIK1P57059 783 aa13.7□□□□□ -0.22
VAMP1-201ENST00000361716 ROR2Q01974 943 aaKnown RBP13.7□□□□□ -0.22
VAMP1-201ENST00000361716 PABPC4Q13310 644 aaKnown RBP eCLIP13.7□□□□□ -0.22
VAMP1-201ENST00000361716 RIPK1Q13546 671 aa13.7□□□□□ -0.22
VAMP1-201ENST00000361716 TRIP13Q15645 432 aaPredicted RBP13.7□□□□□ -0.22
VAMP1-201ENST00000361716 DCAF8Q5TAQ9 597 aa13.7□□□□□ -0.22
VAMP1-201ENST00000361716 GJB7Q6PEY0 223 aa13.7□□□□□ -0.22
VAMP1-201ENST00000361716 KRT25Q7Z3Z0 450 aa13.7□□□□□ -0.22
VAMP1-201ENST00000361716 ARHGAP22Q7Z5H3 698 aa13.7□□□□□ -0.22
VAMP1-201ENST00000361716 CCDC105Q8IYK2 499 aa13.7□□□□□ -0.22
VAMP1-201ENST00000361716 DNAJC9Q8WXX5 260 aa13.7□□□□□ -0.22
VAMP1-201ENST00000361716 IL17RBQ9NRM6 502 aa13.7□□□□□ -0.22
VAMP1-201ENST00000361716 KBTBD4Q9NVX7 518 aa13.7□□□□□ -0.22
VAMP1-201ENST00000361716 CTNNAL1Q9UBT7 734 aa13.7□□□□□ -0.22
VAMP1-201ENST00000361716 MTRF1LQ9UGC7 380 aaKnown RBP13.7□□□□□ -0.22
VAMP1-201ENST00000361716 SRP68Q9UHB9 627 aaKnown RBP13.7□□□□□ -0.22
VAMP1-201ENST00000361716 SCOCQ9UIL1 159 aa13.7□□□□□ -0.22
VAMP1-201ENST00000361716 CHMP2AO43633 222 aa13.69□□□□□ -0.22
VAMP1-201ENST00000361716 BAG3O95817 575 aa13.69□□□□□ -0.22
VAMP1-201ENST00000361716 FESP07332 822 aa13.69□□□□□ -0.22
VAMP1-201ENST00000361716 SLURP2P0DP57 97 aa13.69□□□□□ -0.22
VAMP1-201ENST00000361716 STAT3P40763 770 aa13.69□□□□□ -0.22
VAMP1-201ENST00000361716 USP11P51784 963 aa13.69□□□□□ -0.22
VAMP1-201ENST00000361716 SEPT2Q15019 361 aa13.69□□□□□ -0.22
VAMP1-201ENST00000361716 EMC10Q5UCC4 262 aa13.69□□□□□ -0.22
VAMP1-201ENST00000361716 BARGINQ6ZT62 677 aa13.69□□□□□ -0.22
VAMP1-201ENST00000361716 MIGA2Q7L4E1 593 aa13.69□□□□□ -0.22
VAMP1-201ENST00000361716 ZSCAN29Q8IWY8 852 aaPredicted RBP13.69□□□□□ -0.22
VAMP1-201ENST00000361716 RNF25Q96BH1 459 aaPredicted RBP13.69□□□□□ -0.22
VAMP1-201ENST00000361716 RHBDL2Q9NX52 303 aa13.69□□□□□ -0.22
VAMP1-201ENST00000361716 SSU72P8A0A1W2PR75 194 aa13.69□□□□□ -0.22
VAMP1-201ENST00000361716 FIGNQ5HY92 759 aa13.69□□□□□ -0.22
VAMP1-201ENST00000361716 SLC30A10Q6XR72 485 aa13.69□□□□□ -0.22
VAMP1-201ENST00000361716 KCNK18Q7Z418 384 aa13.69□□□□□ -0.22
VAMP1-201ENST00000361716 SRRM1Q8IYB3 904 aaKnown RBP13.69□□□□□ -0.22
VAMP1-201ENST00000361716 ATXN2LQ8WWM7 1075 aaKnown RBP13.69□□□□□ -0.22
VAMP1-201ENST00000361716 RAB3IPQ96QF0 476 aaPredicted RBP13.69□□□□□ -0.22
VAMP1-201ENST00000361716 BRIP1Q9BX63 1249 aa13.69□□□□□ -0.22
VAMP1-201ENST00000361716 OSGEPQ9NPF4 335 aa13.69□□□□□ -0.22
VAMP1-201ENST00000361716 SRRM3A6NNA2 597 aaPredicted RBP13.68□□□□□ -0.22
VAMP1-201ENST00000361716 SLC37A4O43826 429 aa13.68□□□□□ -0.22
VAMP1-201ENST00000361716 H2AFZP0C0S5 128 aa13.68□□□□□ -0.22
VAMP1-201ENST00000361716 SLC9A1P19634 815 aa13.68□□□□□ -0.22
VAMP1-201ENST00000361716 NR2F2P24468 414 aa13.68□□□□□ -0.22
VAMP1-201ENST00000361716 H2AFVQ71UI9 128 aa13.68□□□□□ -0.22
VAMP1-201ENST00000361716 PIGWQ7Z7B1 504 aa13.68□□□□□ -0.22
VAMP1-201ENST00000361716 VPS36Q86VN1 386 aa13.68□□□□□ -0.22
VAMP1-201ENST00000361716 MFN1Q8IWA4 741 aa13.68□□□□□ -0.22
VAMP1-201ENST00000361716 ZNF34Q8IZ26 560 aa13.68□□□□□ -0.22
VAMP1-201ENST00000361716 CTNNBL1Q8WYA6 563 aaPredicted RBP13.68□□□□□ -0.22
VAMP1-201ENST00000361716 ITFG2Q969R8 447 aa13.68□□□□□ -0.22
VAMP1-201ENST00000361716 DYDC2Q96IM9 177 aa13.68□□□□□ -0.22
VAMP1-201ENST00000361716 CEP72Q9P209 647 aa13.68□□□□□ -0.22
VAMP1-201ENST00000361716 ARL2BPQ9Y2Y0 163 aa13.68□□□□□ -0.22
VAMP1-201ENST00000361716 SUGT1Q9Y2Z0 365 aa13.68□□□□□ -0.22
VAMP1-201ENST00000361716 COL4A3BPQ9Y5P4 624 aa13.68□□□□□ -0.22
VAMP1-201ENST00000361716 RIMBP2O15034 1052 aa13.68□□□□□ -0.22
VAMP1-201ENST00000361716 EPHB2P29323 1055 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms