RNA–Protein interactions for RNA: ENST00000360579.11

VPS29-201, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,091 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-201ENST00000360579 PLCD3Q8N3E9 789 aa15.72■□□□□ 0.11
VPS29-201ENST00000360579 TMEM105Q8N8V8 129 aa15.72■□□□□ 0.11
VPS29-201ENST00000360579 TDRD5Q8NAT2 981 aaKnown RBP15.72■□□□□ 0.11
VPS29-201ENST00000360579 RSPH1Q8WYR4 309 aa15.72■□□□□ 0.11
VPS29-201ENST00000360579 MAP7D2Q96T17 732 aa15.72■□□□□ 0.11
VPS29-201ENST00000360579 PPP1R16BQ96T49 567 aa15.72■□□□□ 0.11
VPS29-201ENST00000360579 MRPL9Q9BYD2 267 aaKnown RBP15.72■□□□□ 0.11
VPS29-201ENST00000360579 MFSD1Q9H3U5 465 aa15.72■□□□□ 0.11
VPS29-201ENST00000360579 TBC1D22BQ9NU19 505 aa15.72■□□□□ 0.11
VPS29-201ENST00000360579 RBM28Q9NW13 759 aaKnown RBP15.72■□□□□ 0.11
VPS29-201ENST00000360579 TCEAL9Q9UHQ7 104 aa15.72■□□□□ 0.11
VPS29-201ENST00000360579 USTQ9Y2C2 406 aa15.72■□□□□ 0.11
VPS29-201ENST00000360579 LOXHD1Q8IVV2 1947 aa15.72■□□□□ 0.11
VPS29-201ENST00000360579 VTNP04004 478 aa15.71■□□□□ 0.11
VPS29-201ENST00000360579 CD44P16070 742 aaKnown RBP15.71■□□□□ 0.11
VPS29-201ENST00000360579 TMOD1P28289 359 aa15.71■□□□□ 0.11
VPS29-201ENST00000360579 CLCN5P51795 746 aa15.71■□□□□ 0.11
VPS29-201ENST00000360579 ATAT1Q5SQI0 421 aa15.71■□□□□ 0.11
VPS29-201ENST00000360579 ERMP1Q7Z2K6 904 aa15.71■□□□□ 0.11
VPS29-201ENST00000360579 SGMS1Q86VZ5 419 aa15.71■□□□□ 0.11
VPS29-201ENST00000360579 ECHDC2Q86YB7 292 aa15.71■□□□□ 0.11
VPS29-201ENST00000360579 SMAP1Q8IYB5 467 aaPredicted RBP15.71■□□□□ 0.11
VPS29-201ENST00000360579 SLC39A11Q8N1S5 342 aa15.71■□□□□ 0.11
VPS29-201ENST00000360579 TMEM87AQ8NBN3 555 aa15.71■□□□□ 0.11
VPS29-201ENST00000360579 NKD2Q969F2 451 aaPredicted RBP15.71■□□□□ 0.11
VPS29-201ENST00000360579 PGBD1Q96JS3 809 aa15.71■□□□□ 0.11
VPS29-201ENST00000360579 MAFBQ9Y5Q3 323 aaPredicted RBP15.71■□□□□ 0.11
VPS29-201ENST00000360579 VPS13AQ96RL7 3174 aa15.7■□□□□ 0.1
VPS29-201ENST00000360579 SMCO2A6NFE2 343 aa15.7■□□□□ 0.1
VPS29-201ENST00000360579 IPO5O00410 1097 aaKnown RBP15.7■□□□□ 0.1
VPS29-201ENST00000360579 DHX15O43143 795 aaKnown RBP15.7■□□□□ 0.1
VPS29-201ENST00000360579 CLASP2O75122 1294 aaKnown RBP15.7■□□□□ 0.1
VPS29-201ENST00000360579 EOMESO95936 686 aa15.7■□□□□ 0.1
VPS29-201ENST00000360579 ATP4AP20648 1035 aa15.7■□□□□ 0.1
VPS29-201ENST00000360579 EIF4BP23588 611 aaKnown RBP15.7■□□□□ 0.1
VPS29-201ENST00000360579 CA8P35219 290 aa15.7■□□□□ 0.1
VPS29-201ENST00000360579 PBX3P40426 434 aa15.7■□□□□ 0.1
VPS29-201ENST00000360579 ALDH7A1P49419 539 aaKnown RBP15.7■□□□□ 0.1
VPS29-201ENST00000360579 GIT2Q14161 759 aa15.7■□□□□ 0.1
VPS29-201ENST00000360579 KIAA1841Q6NSI8 718 aa15.7■□□□□ 0.1
VPS29-201ENST00000360579 ZNF746Q6NUN9 644 aaPredicted RBP15.7■□□□□ 0.1
VPS29-201ENST00000360579 PLA2G4DQ86XP0 818 aa15.7■□□□□ 0.1
VPS29-201ENST00000360579 RAB11FIP4Q86YS3 637 aa15.7■□□□□ 0.1
VPS29-201ENST00000360579 TMEM169Q96HH4 297 aa15.7■□□□□ 0.1
VPS29-201ENST00000360579 FAM167AQ96KS9 214 aa15.7■□□□□ 0.1
VPS29-201ENST00000360579 RNF19AQ9NV58 838 aa15.7■□□□□ 0.1
VPS29-201ENST00000360579 AKT3Q9Y243 479 aa15.7■□□□□ 0.1
VPS29-201ENST00000360579 CNTNAP5Q8WYK1 1306 aa15.69■□□□□ 0.1
VPS29-201ENST00000360579 A0A0U1RQF3 1178 aa15.69■□□□□ 0.1
VPS29-201ENST00000360579 PSAPP07602 524 aa15.69■□□□□ 0.1
VPS29-201ENST00000360579 CLK2P49760 499 aaKnown RBP15.69■□□□□ 0.1
VPS29-201ENST00000360579 NLRP11P59045 1033 aaKnown RBP15.69■□□□□ 0.1
VPS29-201ENST00000360579 SETQ01105 290 aaPredicted RBP15.69■□□□□ 0.1
VPS29-201ENST00000360579 TYW1BQ6NUM6 668 aa15.69■□□□□ 0.1
VPS29-201ENST00000360579 RNF169Q8NCN4 708 aa15.69■□□□□ 0.1
VPS29-201ENST00000360579 EXOC6Q8TAG9 804 aa15.69■□□□□ 0.1
VPS29-201ENST00000360579 ZNF577Q9BSK1 485 aa15.69■□□□□ 0.1
VPS29-201ENST00000360579 BARHL2Q9NY43 387 aa15.69■□□□□ 0.1
VPS29-201ENST00000360579 DACT1Q9NYF0 836 aa15.69■□□□□ 0.1
VPS29-201ENST00000360579 CDH22Q9UJ99 828 aa15.69■□□□□ 0.1
VPS29-201ENST00000360579 DBR1Q9UK59 544 aaKnown RBP15.69■□□□□ 0.1
VPS29-201ENST00000360579 PCDHA10Q9Y5I2 948 aa15.69■□□□□ 0.1
VPS29-201ENST00000360579 PLXNA3P51805 1871 aa15.69■□□□□ 0.1
VPS29-201ENST00000360579 FAM186AA6NE01 2351 aa15.69■□□□□ 0.1
VPS29-201ENST00000360579 FAM86B1E9PN63 330 aa15.68■□□□□ 0.1
VPS29-201ENST00000360579 CXCL14O95715 111 aa15.68■□□□□ 0.1
VPS29-201ENST00000360579 CYP3A4P08684 503 aa15.68■□□□□ 0.1
VPS29-201ENST00000360579 FAM86B2P0C5J1 330 aa15.68■□□□□ 0.1
VPS29-201ENST00000360579 CLCN3P51790 818 aa15.68■□□□□ 0.1
VPS29-201ENST00000360579 CLLU1OSQ5K130 101 aa15.68■□□□□ 0.1
VPS29-201ENST00000360579 RARS2Q5T160 578 aaKnown RBP15.68■□□□□ 0.1
VPS29-201ENST00000360579 EFCAB12Q6NXP0 572 aa15.68■□□□□ 0.1
VPS29-201ENST00000360579 ACSF2Q96CM8 615 aaPredicted RBP15.68■□□□□ 0.1
VPS29-201ENST00000360579 ADAMTS10Q9H324 1103 aa15.68■□□□□ 0.1
VPS29-201ENST00000360579 LIMD1Q9UGP4 676 aa15.68■□□□□ 0.1
VPS29-201ENST00000360579 IRAK3Q9Y616 596 aa15.68■□□□□ 0.1
VPS29-201ENST00000360579 IGLV3-22A0A075B6J6 115 aa15.67■□□□□ 0.1
VPS29-201ENST00000360579 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.67■□□□□ 0.1
VPS29-201ENST00000360579 SLC27A2O14975 620 aa15.67■□□□□ 0.1
VPS29-201ENST00000360579 ASGR2P07307 311 aa15.67■□□□□ 0.1
VPS29-201ENST00000360579 METAP2P50579 478 aaKnown RBP eCLIP15.67■□□□□ 0.1
VPS29-201ENST00000360579 POLGP54098 1239 aaPredicted RBP15.67■□□□□ 0.1
VPS29-201ENST00000360579 BCAR1P56945 870 aa15.67■□□□□ 0.1
VPS29-201ENST00000360579 RTN1Q16799 776 aa15.67■□□□□ 0.1
VPS29-201ENST00000360579 APOA5Q6Q788 366 aa15.67■□□□□ 0.1
VPS29-201ENST00000360579 FRMD5Q7Z6J6 570 aa15.67■□□□□ 0.1
VPS29-201ENST00000360579 ZNF598Q86UK7 904 aaKnown RBP15.67■□□□□ 0.1
VPS29-201ENST00000360579 PPFIBP1Q86W92 1011 aa15.67■□□□□ 0.1
VPS29-201ENST00000360579 VPS52Q8N1B4 723 aa15.67■□□□□ 0.1
VPS29-201ENST00000360579 LINC01465Q8N7H1 131 aa15.67■□□□□ 0.1
VPS29-201ENST00000360579 HELQQ8TDG4 1101 aa15.67■□□□□ 0.1
VPS29-201ENST00000360579 SCLT1Q96NL6 688 aa15.67■□□□□ 0.1
VPS29-201ENST00000360579 LRRC2Q9BYS8 371 aa15.67■□□□□ 0.1
VPS29-201ENST00000360579 CYP26B1Q9NR63 512 aa15.67■□□□□ 0.1
VPS29-201ENST00000360579 GABBR1Q9UBS5 961 aa15.67■□□□□ 0.1
VPS29-201ENST00000360579 STK39Q9UEW8 545 aa15.67■□□□□ 0.1
VPS29-201ENST00000360579 V9GY48 417 aaPredicted RBP15.67■□□□□ 0.1
VPS29-201ENST00000360579 DARSP14868 501 aaKnown RBP15.66■□□□□ 0.1
VPS29-201ENST00000360579 ID4P47928 161 aa15.66■□□□□ 0.1
VPS29-201ENST00000360579 CDC42EP1Q00587 391 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms