RNA–Protein interactions for RNA: ENST00000359454.10

CCDC196-201, Transcript of coiled-coil domain containing 196, humanhuman

TSL 1 (best)

Gene CCDC196, Length 1,083 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196-201ENST00000359454 SDSP20132 328 aa7.3□□□□□ -1.24
CCDC196-201ENST00000359454 HOXA13P31271 388 aaPredicted RBP7.3□□□□□ -1.24
CCDC196-201ENST00000359454 ICAM3P32942 547 aa7.3□□□□□ -1.24
CCDC196-201ENST00000359454 DLX2Q07687 328 aaPredicted RBP7.3□□□□□ -1.24
CCDC196-201ENST00000359454 CLUL1Q15846 466 aa7.3□□□□□ -1.24
CCDC196-201ENST00000359454 METTL7BQ6UX53 244 aa7.3□□□□□ -1.24
CCDC196-201ENST00000359454 SLC9A9Q8IVB4 645 aa7.3□□□□□ -1.24
CCDC196-201ENST00000359454 STAG2Q8N3U4 1231 aa7.3□□□□□ -1.24
CCDC196-201ENST00000359454 RNF217Q8TC41 542 aa7.3□□□□□ -1.24
CCDC196-201ENST00000359454 PPP2R3CQ969Q6 453 aa7.3□□□□□ -1.24
CCDC196-201ENST00000359454 RILPL2Q969X0 211 aa7.3□□□□□ -1.24
CCDC196-201ENST00000359454 SNX27Q96L92 541 aa7.3□□□□□ -1.24
CCDC196-201ENST00000359454 GPR20Q99678 358 aa7.3□□□□□ -1.24
CCDC196-201ENST00000359454 UBAC1Q9BSL1 405 aa7.3□□□□□ -1.24
CCDC196-201ENST00000359454 PLVAPQ9BX97 442 aa7.3□□□□□ -1.24
CCDC196-201ENST00000359454 KRT23Q9C075 422 aa7.3□□□□□ -1.24
CCDC196-201ENST00000359454 GRIP2Q9C0E4 1043 aa7.3□□□□□ -1.24
CCDC196-201ENST00000359454 IGFLR1Q9H665 355 aa7.3□□□□□ -1.24
CCDC196-201ENST00000359454 SETD4Q9NVD3 440 aa7.3□□□□□ -1.24
CCDC196-201ENST00000359454 SCHIP1Q9P0W5 487 aaPredicted RBP7.3□□□□□ -1.24
CCDC196-201ENST00000359454 ZSWIM5Q9P217 1185 aa7.3□□□□□ -1.24
CCDC196-201ENST00000359454 ZNF215Q9UL58 517 aaPredicted RBP7.3□□□□□ -1.24
CCDC196-201ENST00000359454 MYH7BA7E2Y1 1941 aa7.3□□□□□ -1.24
CCDC196-201ENST00000359454 NRCAMQ92823 1304 aa7.29□□□□□ -1.24
CCDC196-201ENST00000359454 TMEM221A6NGB7 291 aa7.29□□□□□ -1.24
CCDC196-201ENST00000359454 FIGNL2A6NMB9 653 aa7.29□□□□□ -1.24
CCDC196-201ENST00000359454 SPATA31C2B4DYI2 1134 aa7.29□□□□□ -1.24
CCDC196-201ENST00000359454 M0R296 226 aa7.29□□□□□ -1.24
CCDC196-201ENST00000359454 ENPP3O14638 875 aa7.29□□□□□ -1.24
CCDC196-201ENST00000359454 FIBPO43427 364 aa7.29□□□□□ -1.24
CCDC196-201ENST00000359454 TBX10O75333 385 aa7.29□□□□□ -1.24
CCDC196-201ENST00000359454 CHRNA1P02708 482 aa7.29□□□□□ -1.24
CCDC196-201ENST00000359454 MMP1P03956 469 aa7.29□□□□□ -1.24
CCDC196-201ENST00000359454 LINC00271P0C7V0 271 aa7.29□□□□□ -1.24
CCDC196-201ENST00000359454 NDUFV1P49821 464 aa7.29□□□□□ -1.24
CCDC196-201ENST00000359454 ADAM17P78536 824 aa7.29□□□□□ -1.24
CCDC196-201ENST00000359454 ARHGAP4P98171 946 aa7.29□□□□□ -1.24
CCDC196-201ENST00000359454 FOXK2Q01167 660 aa7.29□□□□□ -1.24
CCDC196-201ENST00000359454 ADAM15Q13444 863 aa7.29□□□□□ -1.24
CCDC196-201ENST00000359454 BTG3Q14201 252 aaPredicted RBP7.29□□□□□ -1.24
CCDC196-201ENST00000359454 IMMTQ16891 758 aaKnown RBP7.29□□□□□ -1.24
CCDC196-201ENST00000359454 NAALADL2Q58DX5 795 aa7.29□□□□□ -1.24
CCDC196-201ENST00000359454 TBCELQ5QJ74 424 aa7.29□□□□□ -1.24
CCDC196-201ENST00000359454 IFIT1BQ5T764 474 aaKnown RBP7.29□□□□□ -1.24
CCDC196-201ENST00000359454 UTP14CQ5TAP6 766 aaKnown RBP7.29□□□□□ -1.24
CCDC196-201ENST00000359454 TAF2Q6P1X5 1199 aa7.29□□□□□ -1.24
CCDC196-201ENST00000359454 CYFIP1Q7L576 1253 aa7.29□□□□□ -1.24
CCDC196-201ENST00000359454 RSPH3Q86UC2 560 aa7.29□□□□□ -1.24
CCDC196-201ENST00000359454 FCHSD1Q86WN1 690 aa7.29□□□□□ -1.24
CCDC196-201ENST00000359454 LMBR1Q8WVP7 490 aa7.29□□□□□ -1.24
CCDC196-201ENST00000359454 P2RX5Q93086 422 aa7.29□□□□□ -1.24
CCDC196-201ENST00000359454 ZNF689Q96CS4 500 aaPredicted RBP7.29□□□□□ -1.24
CCDC196-201ENST00000359454 PRIMPOLQ96LW4 560 aa7.29□□□□□ -1.24
CCDC196-201ENST00000359454 INPP4AQ96PE3 977 aaPredicted RBP7.29□□□□□ -1.24
CCDC196-201ENST00000359454 TSPAN10Q9H1Z9 355 aaPredicted RBP7.29□□□□□ -1.24
CCDC196-201ENST00000359454 BCAS3Q9H6U6 928 aa7.29□□□□□ -1.24
CCDC196-201ENST00000359454 CNNM2Q9H8M5 875 aa7.29□□□□□ -1.24
CCDC196-201ENST00000359454 EHMT1Q9H9B1 1298 aa7.29□□□□□ -1.24
CCDC196-201ENST00000359454 RC3H2Q9HBD1 1191 aaKnown RBP7.29□□□□□ -1.24
CCDC196-201ENST00000359454 SENP2Q9HC62 589 aa7.29□□□□□ -1.24
CCDC196-201ENST00000359454 MAD2L2Q9UI95 211 aa7.29□□□□□ -1.24
CCDC196-201ENST00000359454 NLRC5Q86WI3 1866 aa7.29□□□□□ -1.24
CCDC196-201ENST00000359454 FRMPD4Q14CM0 1322 aa7.28□□□□□ -1.24
CCDC196-201ENST00000359454 XIRP2A4UGR9 3374 aa7.28□□□□□ -1.24
CCDC196-201ENST00000359454 LINC01565O15544 149 aa7.28□□□□□ -1.24
CCDC196-201ENST00000359454 DGKIO75912 1065 aa7.28□□□□□ -1.24
CCDC196-201ENST00000359454 EYA4O95677 639 aa7.28□□□□□ -1.24
CCDC196-201ENST00000359454 RPLP2P05387 115 aaKnown RBP7.28□□□□□ -1.24
CCDC196-201ENST00000359454 GHRP10912 638 aa7.28□□□□□ -1.24
CCDC196-201ENST00000359454 GTF2F1P35269 517 aaKnown RBP eCLIP7.28□□□□□ -1.24
CCDC196-201ENST00000359454 MRPS9P82933 396 aaKnown RBP7.28□□□□□ -1.24
CCDC196-201ENST00000359454 MGAT3Q09327 533 aa7.28□□□□□ -1.24
CCDC196-201ENST00000359454 HDAC1Q13547 482 aaPredicted RBP7.28□□□□□ -1.24
CCDC196-201ENST00000359454 LPIN1Q14693 890 aa7.28□□□□□ -1.24
CCDC196-201ENST00000359454 SEC23AQ15436 765 aa7.28□□□□□ -1.24
CCDC196-201ENST00000359454 XRRA1Q6P2D8 792 aa7.28□□□□□ -1.24
CCDC196-201ENST00000359454 LYSMD3Q7Z3D4 306 aa7.28□□□□□ -1.24
CCDC196-201ENST00000359454 PRICKLE2Q7Z3G6 844 aa7.28□□□□□ -1.24
CCDC196-201ENST00000359454 HOMER1Q86YM7 354 aa7.28□□□□□ -1.24
CCDC196-201ENST00000359454 SUGP1Q8IWZ8 645 aaKnown RBP7.28□□□□□ -1.24
CCDC196-201ENST00000359454 CMTR2Q8IYT2 770 aaKnown RBP7.28□□□□□ -1.24
CCDC196-201ENST00000359454 EFHBQ8N7U6 833 aa7.28□□□□□ -1.24
CCDC196-201ENST00000359454 GIMAP8Q8ND71 665 aaPredicted RBP7.28□□□□□ -1.24
CCDC196-201ENST00000359454 PRSS33Q8NF86 280 aa7.28□□□□□ -1.24
CCDC196-201ENST00000359454 SCG3Q8WXD2 468 aaKnown RBP7.28□□□□□ -1.24
CCDC196-201ENST00000359454 MSLNLQ96KJ4 702 aa7.28□□□□□ -1.24
CCDC196-201ENST00000359454 PIGSQ96S52 555 aa7.28□□□□□ -1.24
CCDC196-201ENST00000359454 SENP7Q9BQF6 1050 aa7.28□□□□□ -1.24
CCDC196-201ENST00000359454 DSCC1Q9BVC3 393 aa7.28□□□□□ -1.24
CCDC196-201ENST00000359454 TRAIPQ9BWF2 469 aa7.28□□□□□ -1.24
CCDC196-201ENST00000359454 RIOX1Q9H6W3 641 aa7.28□□□□□ -1.24
CCDC196-201ENST00000359454 ALG13Q9NP73 1137 aaKnown RBP7.28□□□□□ -1.24
CCDC196-201ENST00000359454 DIAPH3Q9NSV4 1193 aa7.28□□□□□ -1.24
CCDC196-201ENST00000359454 PLAGL2Q9UPG8 496 aa7.28□□□□□ -1.24
CCDC196-201ENST00000359454 USP3Q9Y6I4 520 aa7.28□□□□□ -1.24
CCDC196-201ENST00000359454 LAMA4Q16363 1823 aa7.28□□□□□ -1.24
CCDC196-201ENST00000359454 MYH6P13533 1939 aa7.28□□□□□ -1.24
CCDC196-201ENST00000359454 PNMA6FA0A0J9YX94 578 aa7.27□□□□□ -1.25
CCDC196-201ENST00000359454 LOC730098B7Z3J9 87 aa7.27□□□□□ -1.25
CCDC196-201ENST00000359454 HIP1O00291 1037 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms