RNA–Protein interactions for RNA: ENST00000359366.9

ATXN3-202, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-202ENST00000359366 LRRC63Q05C16 580 aa5.59□□□□□ -1.52
ATXN3-202ENST00000359366 LY6KQ17RY6 165 aa5.59□□□□□ -1.52
ATXN3-202ENST00000359366 KNOP1Q1ED39 458 aaKnown RBP5.59□□□□□ -1.52
ATXN3-202ENST00000359366 SWT1Q5T5J6 900 aaKnown RBP5.59□□□□□ -1.52
ATXN3-202ENST00000359366 TCERG1LQ5VWI1 586 aa5.59□□□□□ -1.52
ATXN3-202ENST00000359366 GPAT2Q6NUI2 795 aa5.59□□□□□ -1.52
ATXN3-202ENST00000359366 EPM2AIP1Q7L775 607 aaPredicted RBP5.59□□□□□ -1.52
ATXN3-202ENST00000359366 FAM178BQ8IXR5 827 aa5.59□□□□□ -1.52
ATXN3-202ENST00000359366 KCNV2Q8TDN2 545 aa5.59□□□□□ -1.52
ATXN3-202ENST00000359366 ELMO3Q96BJ8 720 aa5.59□□□□□ -1.52
ATXN3-202ENST00000359366 INPP4AQ96PE3 977 aaPredicted RBP5.59□□□□□ -1.52
ATXN3-202ENST00000359366 JPH1Q9HDC5 661 aaPredicted RBP5.59□□□□□ -1.52
ATXN3-202ENST00000359366 NMRK2Q9NPI5 230 aa5.59□□□□□ -1.52
ATXN3-202ENST00000359366 COL4A3BPQ9Y5P4 624 aa5.59□□□□□ -1.52
ATXN3-202ENST00000359366 ZNFX1Q9P2E3 1918 aaKnown RBP5.59□□□□□ -1.52
ATXN3-202ENST00000359366 DOCK3Q8IZD9 2030 aa5.58□□□□□ -1.52
ATXN3-202ENST00000359366 WDR64B1ANS9 1081 aa5.58□□□□□ -1.52
ATXN3-202ENST00000359366 ARHGAP6O43182 974 aa5.58□□□□□ -1.52
ATXN3-202ENST00000359366 ARIH2O95376 493 aa5.58□□□□□ -1.52
ATXN3-202ENST00000359366 TFRCP02786 760 aaKnown RBP5.58□□□□□ -1.52
ATXN3-202ENST00000359366 NR3C1P04150 777 aa5.58□□□□□ -1.52
ATXN3-202ENST00000359366 PNMA6AP0CW24 399 aaPredicted RBP5.58□□□□□ -1.52
ATXN3-202ENST00000359366 CAPN2P17655 700 aa5.58□□□□□ -1.52
ATXN3-202ENST00000359366 MARK3P27448 753 aa5.58□□□□□ -1.52
ATXN3-202ENST00000359366 NOP2P46087 812 aaKnown RBP5.58□□□□□ -1.52
ATXN3-202ENST00000359366 DNM2P50570 870 aa5.58□□□□□ -1.52
ATXN3-202ENST00000359366 ALDH5A1P51649 535 aaPredicted RBP5.58□□□□□ -1.52
ATXN3-202ENST00000359366 OAZ1P54368 228 aa5.58□□□□□ -1.52
ATXN3-202ENST00000359366 PEX3P56589 373 aa5.58□□□□□ -1.52
ATXN3-202ENST00000359366 ACTR2P61160 394 aa5.58□□□□□ -1.52
ATXN3-202ENST00000359366 CYP27A1Q02318 531 aa5.58□□□□□ -1.52
ATXN3-202ENST00000359366 ARID5AQ03989 594 aa5.58□□□□□ -1.52
ATXN3-202ENST00000359366 KCNMA1Q12791 1236 aa5.58□□□□□ -1.52
ATXN3-202ENST00000359366 FKBP15Q5T1M5 1219 aa5.58□□□□□ -1.52
ATXN3-202ENST00000359366 WDR59Q6PJI9 974 aa5.58□□□□□ -1.52
ATXN3-202ENST00000359366 ARMC9Q7Z3E5 817 aa5.58□□□□□ -1.52
ATXN3-202ENST00000359366 TRIM50Q86XT4 487 aa5.58□□□□□ -1.52
ATXN3-202ENST00000359366 DNAAF5Q86Y56 855 aa5.58□□□□□ -1.52
ATXN3-202ENST00000359366 FBXO16Q8IX29 292 aaPredicted RBP5.58□□□□□ -1.52
ATXN3-202ENST00000359366 EXOC8Q8IYI6 725 aa5.58□□□□□ -1.52
ATXN3-202ENST00000359366 ANKRD13CQ8N6S4 541 aa5.58□□□□□ -1.52
ATXN3-202ENST00000359366 PPP1R13LQ8WUF5 828 aa5.58□□□□□ -1.52
ATXN3-202ENST00000359366 BSNDQ8WZ55 320 aa5.58□□□□□ -1.52
ATXN3-202ENST00000359366 COPS5Q92905 334 aa5.58□□□□□ -1.52
ATXN3-202ENST00000359366 ZNF668Q96K58 619 aaPredicted RBP5.58□□□□□ -1.52
ATXN3-202ENST00000359366 PANX2Q96RD6 677 aa5.58□□□□□ -1.52
ATXN3-202ENST00000359366 WDR24Q96S15 920 aa5.58□□□□□ -1.52
ATXN3-202ENST00000359366 TBC1D22BQ9NU19 505 aa5.58□□□□□ -1.52
ATXN3-202ENST00000359366 SEPT9Q9UHD8 586 aaPredicted RBP5.58□□□□□ -1.52
ATXN3-202ENST00000359366 DNAI1Q9UI46 699 aa5.58□□□□□ -1.52
ATXN3-202ENST00000359366 AGTPBP1Q9UPW5 1226 aa5.58□□□□□ -1.52
ATXN3-202ENST00000359366 LUC7L2Q9Y383 392 aaKnown RBP5.58□□□□□ -1.52
ATXN3-202ENST00000359366 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.58□□□□□ -1.52
ATXN3-202ENST00000359366 GOLGA8IPA6NC78 632 aa5.58□□□□□ -1.52
ATXN3-202ENST00000359366 KLHL33A6NCF5 533 aa5.58□□□□□ -1.52
ATXN3-202ENST00000359366 GOLGA8JA6NMD2 632 aa5.58□□□□□ -1.52
ATXN3-202ENST00000359366 CCDC169A6NNP5 214 aa5.58□□□□□ -1.52
ATXN3-202ENST00000359366 ATP2A1O14983 1001 aa5.58□□□□□ -1.52
ATXN3-202ENST00000359366 STX10O60499 249 aa5.58□□□□□ -1.52
ATXN3-202ENST00000359366 LRRN2O75325 713 aa5.58□□□□□ -1.52
ATXN3-202ENST00000359366 CELF2O95319 508 aaKnown RBP5.58□□□□□ -1.52
ATXN3-202ENST00000359366 TPM1P09493 284 aa5.58□□□□□ -1.52
ATXN3-202ENST00000359366 TRIM49P0CI25 452 aa5.58□□□□□ -1.52
ATXN3-202ENST00000359366 TRIM49CP0CI26 452 aa5.58□□□□□ -1.52
ATXN3-202ENST00000359366 FDX1P10109 184 aa5.58□□□□□ -1.52
ATXN3-202ENST00000359366 HOXA7P31268 230 aaPredicted RBP5.58□□□□□ -1.52
ATXN3-202ENST00000359366 PSMC5P62195 406 aa5.58□□□□□ -1.52
ATXN3-202ENST00000359366 PRKCEQ02156 737 aa5.58□□□□□ -1.52
ATXN3-202ENST00000359366 PPIL2Q13356 520 aa5.58□□□□□ -1.52
ATXN3-202ENST00000359366 STXBP2Q15833 593 aa5.58□□□□□ -1.52
ATXN3-202ENST00000359366 MAN2A1Q16706 1144 aa5.58□□□□□ -1.52
ATXN3-202ENST00000359366 MTERF2Q49AM1 385 aa5.58□□□□□ -1.52
ATXN3-202ENST00000359366 COBLL1Q53SF7 1204 aa5.58□□□□□ -1.52
ATXN3-202ENST00000359366 GJB7Q6PEY0 223 aa5.58□□□□□ -1.52
ATXN3-202ENST00000359366 RRAGAQ7L523 313 aa5.58□□□□□ -1.52
ATXN3-202ENST00000359366 NIPA1Q7RTP0 329 aa5.58□□□□□ -1.52
ATXN3-202ENST00000359366 ZNF720Q7Z2F6 126 aa5.58□□□□□ -1.52
ATXN3-202ENST00000359366 CCDC91Q7Z6B0 441 aa5.58□□□□□ -1.52
ATXN3-202ENST00000359366 RIOX2Q8IUF8 465 aa5.58□□□□□ -1.52
ATXN3-202ENST00000359366 FAM114A1Q8IWE2 563 aa5.58□□□□□ -1.52
ATXN3-202ENST00000359366 SYCP3Q8IZU3 236 aa5.58□□□□□ -1.52
ATXN3-202ENST00000359366 GOLGA6L1Q8N7Z2 621 aa5.58□□□□□ -1.52
ATXN3-202ENST00000359366 CCDC112Q8NEF3 446 aa5.58□□□□□ -1.52
ATXN3-202ENST00000359366 CEP170P1Q96L14 293 aa5.58□□□□□ -1.52
ATXN3-202ENST00000359366 FGD4Q96M96 766 aa5.58□□□□□ -1.52
ATXN3-202ENST00000359366 TSPAN18Q96SJ8 248 aa5.58□□□□□ -1.52
ATXN3-202ENST00000359366 LSM14BQ9BX40 385 aaKnown RBP5.58□□□□□ -1.52
ATXN3-202ENST00000359366 PDGFCQ9NRA1 345 aa5.58□□□□□ -1.52
ATXN3-202ENST00000359366 SLC9A2Q9UBY0 812 aa5.58□□□□□ -1.52
ATXN3-202ENST00000359366 SIK3Q9Y2K2 1263 aa5.58□□□□□ -1.52
ATXN3-202ENST00000359366 PCDHA10Q9Y5I2 948 aa5.58□□□□□ -1.52
ATXN3-202ENST00000359366 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.58□□□□□ -1.52
ATXN3-202ENST00000359366 ITIH6Q6UXX5 1313 aa5.57□□□□□ -1.52
ATXN3-202ENST00000359366 MKI67P46013 3256 aaKnown RBP5.57□□□□□ -1.52
ATXN3-202ENST00000359366 IQCA1LA6NCM1 817 aa5.57□□□□□ -1.52
ATXN3-202ENST00000359366 SPATA31C2B4DYI2 1134 aa5.57□□□□□ -1.52
ATXN3-202ENST00000359366 CETN3O15182 167 aa5.57□□□□□ -1.52
ATXN3-202ENST00000359366 SLC9A1P19634 815 aa5.57□□□□□ -1.52
ATXN3-202ENST00000359366 ATP4AP20648 1035 aa5.57□□□□□ -1.52
ATXN3-202ENST00000359366 UBA1P22314 1058 aaKnown RBP5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms