RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 TTYH3Q9C0H2 523 aa12.13□□□□□ -0.47
SSU72-202ENST00000359060 NAGPAQ9UK23 515 aa12.13□□□□□ -0.47
SSU72-202ENST00000359060 HPCAL4Q9UM19 191 aa12.13□□□□□ -0.47
SSU72-202ENST00000359060 USTQ9Y2C2 406 aa12.13□□□□□ -0.47
SSU72-202ENST00000359060 NFIBO00712 420 aa12.13□□□□□ -0.47
SSU72-202ENST00000359060 ECM2O94769 699 aaPredicted RBP12.13□□□□□ -0.47
SSU72-202ENST00000359060 KIF4AO95239 1232 aa12.13□□□□□ -0.47
SSU72-202ENST00000359060 SOX5P35711 763 aa12.13□□□□□ -0.47
SSU72-202ENST00000359060 NPEPPSP55786 919 aa12.13□□□□□ -0.47
SSU72-202ENST00000359060 MTERF2Q49AM1 385 aa12.13□□□□□ -0.47
SSU72-202ENST00000359060 DCAF15Q66K64 600 aa12.13□□□□□ -0.47
SSU72-202ENST00000359060 INTS8Q75QN2 995 aaKnown RBP12.13□□□□□ -0.47
SSU72-202ENST00000359060 GLIS2Q9BZE0 524 aaPredicted RBP12.13□□□□□ -0.47
SSU72-202ENST00000359060 COL16A1Q07092 1604 aaPredicted RBP12.13□□□□□ -0.47
SSU72-202ENST00000359060 SLITRK3O94933 977 aa12.12□□□□□ -0.47
SSU72-202ENST00000359060 CCT5P48643 541 aa12.12□□□□□ -0.47
SSU72-202ENST00000359060 VAMP7P51809 220 aa12.12□□□□□ -0.47
SSU72-202ENST00000359060 MTMR2Q13614 643 aa12.12□□□□□ -0.47
SSU72-202ENST00000359060 PLA2G4FQ68DD2 849 aa12.12□□□□□ -0.47
SSU72-202ENST00000359060 ANKRD35Q8N283 1001 aa12.12□□□□□ -0.47
SSU72-202ENST00000359060 ETNPPLQ8TBG4 499 aa12.12□□□□□ -0.47
SSU72-202ENST00000359060 NT5C1BQ96P26 610 aa12.12□□□□□ -0.47
SSU72-202ENST00000359060 TLR10Q9BXR5 811 aa12.12□□□□□ -0.47
SSU72-202ENST00000359060 RNF146Q9NTX7 359 aa12.12□□□□□ -0.47
SSU72-202ENST00000359060 MTRF1LQ9UGC7 380 aaKnown RBP12.12□□□□□ -0.47
SSU72-202ENST00000359060 CCDC88AQ3V6T2 1871 aa12.12□□□□□ -0.47
SSU72-202ENST00000359060 COL4A1P02462 1669 aa12.12□□□□□ -0.47
SSU72-202ENST00000359060 DKC1O60832 514 aaKnown RBP eCLIP12.12□□□□□ -0.47
SSU72-202ENST00000359060 SPATA31C1P0DKV0 1188 aa12.12□□□□□ -0.47
SSU72-202ENST00000359060 CAP2P40123 477 aa12.12□□□□□ -0.47
SSU72-202ENST00000359060 VPS41P49754 854 aa12.12□□□□□ -0.47
SSU72-202ENST00000359060 CALCOCO2Q13137 446 aa12.12□□□□□ -0.47
SSU72-202ENST00000359060 MICALL1Q8N3F8 863 aa12.12□□□□□ -0.47
SSU72-202ENST00000359060 SYN2Q92777 582 aaPredicted RBP12.12□□□□□ -0.47
SSU72-202ENST00000359060 MXRA8Q9BRK3 442 aa12.12□□□□□ -0.47
SSU72-202ENST00000359060 ANKFY1Q9P2R3 1169 aa12.12□□□□□ -0.47
SSU72-202ENST00000359060 CHORDC1Q9UHD1 332 aaPredicted RBP12.12□□□□□ -0.47
SSU72-202ENST00000359060 PLCH1Q4KWH8 1693 aa12.12□□□□□ -0.47
SSU72-202ENST00000359060 CLK2P49760 499 aaKnown RBP12.12□□□□□ -0.47
SSU72-202ENST00000359060 PDE6CP51160 858 aa12.12□□□□□ -0.47
SSU72-202ENST00000359060 NNTQ13423 1086 aa12.12□□□□□ -0.47
SSU72-202ENST00000359060 OTOP1Q7RTM1 612 aa12.12□□□□□ -0.47
SSU72-202ENST00000359060 DHX37Q8IY37 1157 aaKnown RBP12.12□□□□□ -0.47
SSU72-202ENST00000359060 MAGOHBQ96A72 148 aaKnown RBP12.12□□□□□ -0.47
SSU72-202ENST00000359060 ZNF653Q96CK0 615 aa12.12□□□□□ -0.47
SSU72-202ENST00000359060 PAGR1Q9BTK6 254 aa12.12□□□□□ -0.47
SSU72-202ENST00000359060 BCAS3Q9H6U6 928 aa12.12□□□□□ -0.47
SSU72-202ENST00000359060 PPANQ9NQ55 473 aaKnown RBP12.12□□□□□ -0.47
SSU72-202ENST00000359060 AGPAT3Q9NRZ7 376 aa12.12□□□□□ -0.47
SSU72-202ENST00000359060 PIM2Q9P1W9 311 aa12.12□□□□□ -0.47
SSU72-202ENST00000359060 SLC16A3O15427 465 aaKnown RBP12.11□□□□□ -0.47
SSU72-202ENST00000359060 POLGP54098 1239 aaPredicted RBP12.11□□□□□ -0.47
SSU72-202ENST00000359060 GNPTABQ3T906 1256 aa12.11□□□□□ -0.47
SSU72-202ENST00000359060 CREG2Q8IUH2 290 aa12.11□□□□□ -0.47
SSU72-202ENST00000359060 DEPTORQ8TB45 409 aa12.11□□□□□ -0.47
SSU72-202ENST00000359060 ATP6V0A1Q93050 837 aa12.11□□□□□ -0.47
SSU72-202ENST00000359060 GPRC5CQ9NQ84 441 aa12.11□□□□□ -0.47
SSU72-202ENST00000359060 AMACRQ9UHK6 382 aa12.11□□□□□ -0.47
SSU72-202ENST00000359060 PTPN22Q9Y2R2 807 aa12.11□□□□□ -0.47
SSU72-202ENST00000359060 ZHX2Q9Y6X8 837 aa12.11□□□□□ -0.47
SSU72-202ENST00000359060 ZSCAN5CA6NGD5 496 aaPredicted RBP12.11□□□□□ -0.47
SSU72-202ENST00000359060 WDR64B1ANS9 1081 aa12.11□□□□□ -0.47
SSU72-202ENST00000359060 PLSCR1O15162 318 aa12.11□□□□□ -0.47
SSU72-202ENST00000359060 FECHP22830 423 aa12.11□□□□□ -0.47
SSU72-202ENST00000359060 CTNNA2P26232 953 aa12.11□□□□□ -0.47
SSU72-202ENST00000359060 SNRNP48Q6IEG0 339 aaKnown RBP12.11□□□□□ -0.47
SSU72-202ENST00000359060 TATDN1Q6P1N9 297 aa12.11□□□□□ -0.47
SSU72-202ENST00000359060 DPH6Q7L8W6 267 aa12.11□□□□□ -0.47
SSU72-202ENST00000359060 EEPD1Q7L9B9 569 aa12.11□□□□□ -0.47
SSU72-202ENST00000359060 MMGT1Q8N4V1 131 aa12.11□□□□□ -0.47
SSU72-202ENST00000359060 WRNIP1Q96S55 665 aa12.11□□□□□ -0.47
SSU72-202ENST00000359060 RAB17Q9H0T7 212 aa12.11□□□□□ -0.47
SSU72-202ENST00000359060 RPAP3Q9H6T3 665 aaPredicted RBP12.11□□□□□ -0.47
SSU72-202ENST00000359060 AS3MTQ9HBK9 375 aa12.11□□□□□ -0.47
SSU72-202ENST00000359060 ASIC3Q9UHC3 531 aa12.11□□□□□ -0.47
SSU72-202ENST00000359060 ATP8A1Q9Y2Q0 1164 aa12.11□□□□□ -0.47
SSU72-202ENST00000359060 NOC2LQ9Y3T9 749 aaKnown RBP12.11□□□□□ -0.47
SSU72-202ENST00000359060 PLIN4Q96Q06 1357 aa12.11□□□□□ -0.47
SSU72-202ENST00000359060 DENND3A2RUS2 1198 aa12.11□□□□□ -0.47
SSU72-202ENST00000359060 FTLP02792 175 aaPredicted RBP12.11□□□□□ -0.47
SSU72-202ENST00000359060 YWHABP31946 246 aaKnown RBP12.11□□□□□ -0.47
SSU72-202ENST00000359060 PLTPP55058 493 aa12.11□□□□□ -0.47
SSU72-202ENST00000359060 MFAP3P55082 362 aa12.11□□□□□ -0.47
SSU72-202ENST00000359060 BFSP1Q12934 665 aa12.11□□□□□ -0.47
SSU72-202ENST00000359060 GLE1Q53GS7 698 aaKnown RBP12.11□□□□□ -0.47
SSU72-202ENST00000359060 DALRD3Q5D0E6 543 aaKnown RBP12.11□□□□□ -0.47
SSU72-202ENST00000359060 GSTA5Q7RTV2 222 aa12.11□□□□□ -0.47
SSU72-202ENST00000359060 WDR18Q9BV38 432 aa12.11□□□□□ -0.47
SSU72-202ENST00000359060 C1orf112Q9NSG2 853 aa12.11□□□□□ -0.47
SSU72-202ENST00000359060 PRDM4Q9UKN5 801 aa12.11□□□□□ -0.47
SSU72-202ENST00000359060 TRAF3IP3Q9Y228 551 aa12.11□□□□□ -0.47
SSU72-202ENST00000359060 CYP3A7-CYP3A51PA0A087WV96 503 aa12.11□□□□□ -0.47
SSU72-202ENST00000359060 TMEM150BA6NC51 233 aa12.11□□□□□ -0.47
SSU72-202ENST00000359060 RASSF10A6NK89 507 aa12.11□□□□□ -0.47
SSU72-202ENST00000359060 CYP3A7P24462 503 aa12.11□□□□□ -0.47
SSU72-202ENST00000359060 INPP5BP32019 993 aa12.11□□□□□ -0.47
SSU72-202ENST00000359060 RPS6P62753 249 aaKnown RBP12.11□□□□□ -0.47
SSU72-202ENST00000359060 PLCB3Q01970 1234 aa12.11□□□□□ -0.47
SSU72-202ENST00000359060 BAATQ14032 418 aaPredicted RBP12.11□□□□□ -0.47
SSU72-202ENST00000359060 KCTD19Q17RG1 926 aaPredicted RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms