RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 LY6KQ17RY6 165 aa13.86□□□□□ -0.19
GGPS1-202ENST00000358966 TRIM65Q6PJ69 517 aa13.86□□□□□ -0.19
GGPS1-202ENST00000358966 CHST13Q8NET6 341 aa13.86□□□□□ -0.19
GGPS1-202ENST00000358966 SLC9A2Q9UBY0 812 aa13.86□□□□□ -0.19
GGPS1-202ENST00000358966 SEPT9Q9UHD8 586 aaPredicted RBP13.86□□□□□ -0.19
GGPS1-202ENST00000358966 CAPN11Q9UMQ6 739 aa13.86□□□□□ -0.19
GGPS1-202ENST00000358966 CXCL11O14625 94 aa13.85□□□□□ -0.19
GGPS1-202ENST00000358966 CETN3O15182 167 aa13.85□□□□□ -0.19
GGPS1-202ENST00000358966 SLC16A4O15374 487 aa13.85□□□□□ -0.19
GGPS1-202ENST00000358966 ARIH2O95376 493 aa13.85□□□□□ -0.19
GGPS1-202ENST00000358966 STXBP2Q15833 593 aa13.85□□□□□ -0.19
GGPS1-202ENST00000358966 TRIM59Q8IWR1 403 aa13.85□□□□□ -0.19
GGPS1-202ENST00000358966 LRRN4CLQ8ND94 238 aa13.85□□□□□ -0.19
GGPS1-202ENST00000358966 FGD4Q96M96 766 aa13.85□□□□□ -0.19
GGPS1-202ENST00000358966 ERGIC2Q96RQ1 377 aa13.85□□□□□ -0.19
GGPS1-202ENST00000358966 PPP1R12AO14974 1030 aaPredicted RBP13.85□□□□□ -0.19
GGPS1-202ENST00000358966 UBA1P22314 1058 aaKnown RBP13.85□□□□□ -0.19
GGPS1-202ENST00000358966 MAGEA9P43362 315 aa13.85□□□□□ -0.19
GGPS1-202ENST00000358966 PRKCEQ02156 737 aa13.85□□□□□ -0.19
GGPS1-202ENST00000358966 SWT1Q5T5J6 900 aaKnown RBP13.85□□□□□ -0.19
GGPS1-202ENST00000358966 LDLRAD1Q5T700 205 aa13.85□□□□□ -0.19
GGPS1-202ENST00000358966 TRIM50Q86XT4 487 aa13.85□□□□□ -0.19
GGPS1-202ENST00000358966 ANKRD13CQ8N6S4 541 aa13.85□□□□□ -0.19
GGPS1-202ENST00000358966 OR8K1Q8NGG5 319 aa13.85□□□□□ -0.19
GGPS1-202ENST00000358966 BSNDQ8WZ55 320 aa13.85□□□□□ -0.19
GGPS1-202ENST00000358966 CEP170P1Q96L14 293 aa13.85□□□□□ -0.19
GGPS1-202ENST00000358966 TYW1Q9NV66 732 aaKnown RBP13.85□□□□□ -0.19
GGPS1-202ENST00000358966 PNMA2Q9UL42 364 aa13.85□□□□□ -0.19
GGPS1-202ENST00000358966 TRAF3IP3Q9Y228 551 aa13.85□□□□□ -0.19
GGPS1-202ENST00000358966 REXO2Q9Y3B8 237 aaKnown RBP13.85□□□□□ -0.19
GGPS1-202ENST00000358966 SCN4AP35499 1836 aa13.85□□□□□ -0.19
GGPS1-202ENST00000358966 SPATA31C2B4DYI2 1134 aa13.84□□□□□ -0.19
GGPS1-202ENST00000358966 CLSTN1O94985 981 aa13.84□□□□□ -0.19
GGPS1-202ENST00000358966 JAK3P52333 1124 aa13.84□□□□□ -0.19
GGPS1-202ENST00000358966 KCNH2Q12809 1159 aa13.84□□□□□ -0.19
GGPS1-202ENST00000358966 GJC2Q5T442 439 aaPredicted RBP13.84□□□□□ -0.19
GGPS1-202ENST00000358966 FBXO16Q8IX29 292 aaPredicted RBP13.84□□□□□ -0.19
GGPS1-202ENST00000358966 NMRK2Q9NPI5 230 aa13.84□□□□□ -0.19
GGPS1-202ENST00000358966 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.84□□□□□ -0.19
GGPS1-202ENST00000358966 LRRC53A6NM62 1247 aa13.84□□□□□ -0.19
GGPS1-202ENST00000358966 FGFR1OPO95684 399 aaKnown RBP13.84□□□□□ -0.19
GGPS1-202ENST00000358966 PNMA6AP0CW24 399 aaPredicted RBP13.84□□□□□ -0.19
GGPS1-202ENST00000358966 GAP43P17677 238 aa13.84□□□□□ -0.19
GGPS1-202ENST00000358966 KCNJ6P48051 423 aa13.84□□□□□ -0.19
GGPS1-202ENST00000358966 CYP27A1Q02318 531 aa13.84□□□□□ -0.19
GGPS1-202ENST00000358966 ARID5AQ03989 594 aa13.84□□□□□ -0.19
GGPS1-202ENST00000358966 GPS2Q13227 327 aa13.84□□□□□ -0.19
GGPS1-202ENST00000358966 GNPTABQ3T906 1256 aa13.84□□□□□ -0.19
GGPS1-202ENST00000358966 MTERF2Q49AM1 385 aa13.84□□□□□ -0.19
GGPS1-202ENST00000358966 RRAGAQ7L523 313 aa13.84□□□□□ -0.19
GGPS1-202ENST00000358966 RPAINQ86UA6 219 aa13.84□□□□□ -0.19
GGPS1-202ENST00000358966 C4orf19Q8IY42 314 aa13.84□□□□□ -0.19
GGPS1-202ENST00000358966 SYCP3Q8IZU3 236 aa13.84□□□□□ -0.19
GGPS1-202ENST00000358966 NEK9Q8TD19 979 aa13.84□□□□□ -0.19
GGPS1-202ENST00000358966 COPS5Q92905 334 aa13.84□□□□□ -0.19
GGPS1-202ENST00000358966 FAM84AQ96KN4 292 aa13.84□□□□□ -0.19
GGPS1-202ENST00000358966 DNAJC7Q99615 494 aa13.84□□□□□ -0.19
GGPS1-202ENST00000358966 LSM14BQ9BX40 385 aaKnown RBP13.84□□□□□ -0.19
GGPS1-202ENST00000358966 CCDC169A6NNP5 214 aa13.84□□□□□ -0.19
GGPS1-202ENST00000358966 PDXKO00764 312 aa13.84□□□□□ -0.19
GGPS1-202ENST00000358966 TFRCP02786 760 aaKnown RBP13.84□□□□□ -0.19
GGPS1-202ENST00000358966 TRIM49P0CI25 452 aa13.84□□□□□ -0.19
GGPS1-202ENST00000358966 TRIM49CP0CI26 452 aa13.84□□□□□ -0.19
GGPS1-202ENST00000358966 SLC9A1P19634 815 aa13.84□□□□□ -0.19
GGPS1-202ENST00000358966 ATP4AP20648 1035 aa13.84□□□□□ -0.19
GGPS1-202ENST00000358966 BMT2Q1RMZ1 405 aa13.84□□□□□ -0.19
GGPS1-202ENST00000358966 EDRF1Q3B7T1 1238 aa13.84□□□□□ -0.19
GGPS1-202ENST00000358966 ZNF746Q6NUN9 644 aaPredicted RBP13.84□□□□□ -0.19
GGPS1-202ENST00000358966 PNMA8AQ86V59 439 aaPredicted RBP13.84□□□□□ -0.19
GGPS1-202ENST00000358966 SAMD3Q8N6K7 520 aa13.84□□□□□ -0.19
GGPS1-202ENST00000358966 FAM133AQ8N9E0 248 aa13.84□□□□□ -0.19
GGPS1-202ENST00000358966 CEP63Q96MT8 703 aa13.84□□□□□ -0.19
GGPS1-202ENST00000358966 CBWD1Q9BRT8 395 aa13.84□□□□□ -0.19
GGPS1-202ENST00000358966 ARMCX3Q9UH62 379 aaPredicted RBP13.84□□□□□ -0.19
GGPS1-202ENST00000358966 ODF2LQ9ULJ1 636 aa13.84□□□□□ -0.19
GGPS1-202ENST00000358966 ADGRA3Q8IWK6 1321 aa13.83□□□□□ -0.2
GGPS1-202ENST00000358966 ZNFX1Q9P2E3 1918 aaKnown RBP13.83□□□□□ -0.2
GGPS1-202ENST00000358966 LRRN2O75325 713 aa13.83□□□□□ -0.2
GGPS1-202ENST00000358966 NOL4O94818 638 aa13.83□□□□□ -0.2
GGPS1-202ENST00000358966 STBD1O95210 358 aa13.83□□□□□ -0.2
GGPS1-202ENST00000358966 CELF2O95319 508 aaKnown RBP13.83□□□□□ -0.2
GGPS1-202ENST00000358966 CCDC175P0C221 793 aa13.83□□□□□ -0.2
GGPS1-202ENST00000358966 MARK3P27448 753 aa13.83□□□□□ -0.2
GGPS1-202ENST00000358966 SFNP31947 248 aa13.83□□□□□ -0.2
GGPS1-202ENST00000358966 GNG11P61952 73 aa13.83□□□□□ -0.2
GGPS1-202ENST00000358966 TRIM14Q14142 442 aa13.83□□□□□ -0.2
GGPS1-202ENST00000358966 GJB7Q6PEY0 223 aa13.83□□□□□ -0.2
GGPS1-202ENST00000358966 CYP26C1Q6V0L0 522 aa13.83□□□□□ -0.2
GGPS1-202ENST00000358966 ZBTB10Q96DT7 871 aa13.83□□□□□ -0.2
GGPS1-202ENST00000358966 AGPAT3Q9NRZ7 376 aa13.83□□□□□ -0.2
GGPS1-202ENST00000358966 KCND1Q9NSA2 647 aa13.83□□□□□ -0.2
GGPS1-202ENST00000358966 PFASO15067 1338 aa13.83□□□□□ -0.2
GGPS1-202ENST00000358966 CALUO43852 315 aaPredicted RBP13.83□□□□□ -0.2
GGPS1-202ENST00000358966 GRIN3BO60391 1043 aa13.83□□□□□ -0.2
GGPS1-202ENST00000358966 EIF3JO75822 258 aaKnown RBP13.83□□□□□ -0.2
GGPS1-202ENST00000358966 POLR2FP61218 127 aaKnown RBP13.83□□□□□ -0.2
GGPS1-202ENST00000358966 ERVK-9P63128 1117 aa13.83□□□□□ -0.2
GGPS1-202ENST00000358966 SNAPC2Q13487 334 aa13.83□□□□□ -0.2
GGPS1-202ENST00000358966 ABHD15Q6UXT9 468 aa13.83□□□□□ -0.2
GGPS1-202ENST00000358966 SUGP1Q8IWZ8 645 aaKnown RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms