RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 TMEM60Q9H2L4 133 aa14.72□□□□□ -0.05
VCP-201ENST00000358901 NGRNQ9NPE2 291 aaKnown RBP14.72□□□□□ -0.05
VCP-201ENST00000358901 ZNF277Q9NRM2 450 aaPredicted RBP14.72□□□□□ -0.05
VCP-201ENST00000358901 SMARCAL1Q9NZC9 954 aa14.72□□□□□ -0.05
VCP-201ENST00000358901 PXDNLA1KZ92 1463 aa14.72□□□□□ -0.05
VCP-201ENST00000358901 CHD1O14646 1710 aa14.72□□□□□ -0.05
VCP-201ENST00000358901 KIF3CO14782 793 aa14.72□□□□□ -0.05
VCP-201ENST00000358901 PSAPP07602 524 aa14.72□□□□□ -0.05
VCP-201ENST00000358901 MTMR1Q13613 665 aa14.72□□□□□ -0.05
VCP-201ENST00000358901 REXO1L1PQ8IX06 675 aa14.72□□□□□ -0.05
VCP-201ENST00000358901 ZNF564Q8TBZ8 553 aaPredicted RBP14.72□□□□□ -0.05
VCP-201ENST00000358901 RFFLQ8WZ73 363 aa14.72□□□□□ -0.05
VCP-201ENST00000358901 RMDN3Q96TC7 470 aa14.72□□□□□ -0.05
VCP-201ENST00000358901 TFR2Q9UP52 801 aa14.72□□□□□ -0.05
VCP-201ENST00000358901 SCINQ9Y6U3 715 aa14.72□□□□□ -0.05
VCP-201ENST00000358901 MAPK13O15264 365 aa14.71□□□□□ -0.05
VCP-201ENST00000358901 PRPSAP2O60256 369 aa14.71□□□□□ -0.05
VCP-201ENST00000358901 SMIM24O75264 130 aa14.71□□□□□ -0.05
VCP-201ENST00000358901 TOM1L1O75674 476 aa14.71□□□□□ -0.05
VCP-201ENST00000358901 BRAFP15056 766 aa14.71□□□□□ -0.05
VCP-201ENST00000358901 NPR1P16066 1061 aa14.71□□□□□ -0.05
VCP-201ENST00000358901 VAMP7P51809 220 aa14.71□□□□□ -0.05
VCP-201ENST00000358901 MAP7Q14244 749 aa14.71□□□□□ -0.05
VCP-201ENST00000358901 SPARCL1Q14515 664 aa14.71□□□□□ -0.05
VCP-201ENST00000358901 PDIA5Q14554 519 aa14.71□□□□□ -0.05
VCP-201ENST00000358901 SLC18A3Q16572 532 aa14.71□□□□□ -0.05
VCP-201ENST00000358901 CEP120Q8N960 986 aa14.71□□□□□ -0.05
VCP-201ENST00000358901 SALL3Q9BXA9 1300 aa14.71□□□□□ -0.05
VCP-201ENST00000358901 L2HGDHQ9H9P8 463 aa14.71□□□□□ -0.05
VCP-201ENST00000358901 RGL1Q9NZL6 768 aa14.71□□□□□ -0.05
VCP-201ENST00000358901 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.71□□□□□ -0.05
VCP-201ENST00000358901 H0Y3Z8 333 aa14.71□□□□□ -0.05
VCP-201ENST00000358901 PPP1R37O75864 691 aa14.71□□□□□ -0.05
VCP-201ENST00000358901 ABL1P00519 1130 aa14.71□□□□□ -0.05
VCP-201ENST00000358901 CCND2P30279 289 aa14.71□□□□□ -0.05
VCP-201ENST00000358901 RFC1P35251 1148 aaPredicted RBP14.71□□□□□ -0.05
VCP-201ENST00000358901 ACTN3Q08043 901 aaPredicted RBP14.71□□□□□ -0.05
VCP-201ENST00000358901 MMEL1Q495T6 779 aa14.71□□□□□ -0.05
VCP-201ENST00000358901 CCDC93Q567U6 631 aa14.71□□□□□ -0.05
VCP-201ENST00000358901 CLEC10AQ8IUN9 316 aa14.71□□□□□ -0.05
VCP-201ENST00000358901 TRIM59Q8IWR1 403 aa14.71□□□□□ -0.05
VCP-201ENST00000358901 SLITRK6Q9H5Y7 841 aa14.71□□□□□ -0.05
VCP-201ENST00000358901 INTUQ9ULD6 942 aa14.71□□□□□ -0.05
VCP-201ENST00000358901 A0A0G2JND7 137 aa14.71□□□□□ -0.05
VCP-201ENST00000358901 LRRC14Q15048 493 aa14.71□□□□□ -0.05
VCP-201ENST00000358901 PTPAQ15257 358 aa14.71□□□□□ -0.05
VCP-201ENST00000358901 MCUQ8NE86 351 aa14.71□□□□□ -0.05
VCP-201ENST00000358901 ARHGEF1Q92888 912 aaKnown RBP14.71□□□□□ -0.05
VCP-201ENST00000358901 INTS2Q9H0H0 1204 aaKnown RBP14.71□□□□□ -0.05
VCP-201ENST00000358901 QTRT2Q9H974 415 aaKnown RBP14.71□□□□□ -0.05
VCP-201ENST00000358901 PTPRUQ92729 1446 aa14.71□□□□□ -0.06
VCP-201ENST00000358901 CEMIPQ8WUJ3 1361 aa14.71□□□□□ -0.06
VCP-201ENST00000358901 MYMKA6NI61 221 aa14.71□□□□□ -0.06
VCP-201ENST00000358901 TRIM66O15016 1216 aa14.71□□□□□ -0.06
VCP-201ENST00000358901 MED7O43513 233 aa14.71□□□□□ -0.06
VCP-201ENST00000358901 TJP3O95049 919 aa14.71□□□□□ -0.06
VCP-201ENST00000358901 TMEM270Q6UE05 265 aa14.71□□□□□ -0.06
VCP-201ENST00000358901 SRLQ86TD4 932 aa14.71□□□□□ -0.06
VCP-201ENST00000358901 GIMAP8Q8ND71 665 aaPredicted RBP14.71□□□□□ -0.06
VCP-201ENST00000358901 MAML1Q92585 1016 aa14.71□□□□□ -0.06
VCP-201ENST00000358901 TTC17Q96AE7 1141 aa14.71□□□□□ -0.06
VCP-201ENST00000358901 HVCN1Q96D96 273 aa14.71□□□□□ -0.06
VCP-201ENST00000358901 RNPC3Q96LT9 517 aaKnown RBP14.71□□□□□ -0.06
VCP-201ENST00000358901 FAM213AQ9BRX8 229 aa14.71□□□□□ -0.06
VCP-201ENST00000358901 NUP85Q9BW27 656 aa14.71□□□□□ -0.06
VCP-201ENST00000358901 Q9H521 79 aa14.71□□□□□ -0.06
VCP-201ENST00000358901 TRPC5Q9UL62 973 aaPredicted RBP14.71□□□□□ -0.06
VCP-201ENST00000358901 SSU72P8A0A1W2PR75 194 aa14.7□□□□□ -0.06
VCP-201ENST00000358901 IPO5O00410 1097 aaKnown RBP14.7□□□□□ -0.06
VCP-201ENST00000358901 ZBED1O96006 694 aa14.7□□□□□ -0.06
VCP-201ENST00000358901 CHRNA3P32297 505 aa14.7□□□□□ -0.06
VCP-201ENST00000358901 CDO1Q16878 200 aa14.7□□□□□ -0.06
VCP-201ENST00000358901 HP1BP3Q5SSJ5 553 aaPredicted RBP14.7□□□□□ -0.06
VCP-201ENST00000358901 CCDC137Q6PK04 289 aaKnown RBP14.7□□□□□ -0.06
VCP-201ENST00000358901 ZNF512BQ96KM6 892 aaPredicted RBP14.7□□□□□ -0.06
VCP-201ENST00000358901 NLRP4Q96MN2 994 aa14.7□□□□□ -0.06
VCP-201ENST00000358901 SEL1LQ9UBV2 794 aa14.7□□□□□ -0.06
VCP-201ENST00000358901 G3BP2Q9UN86 482 aaKnown RBP14.7□□□□□ -0.06
VCP-201ENST00000358901 NUB1Q9Y5A7 615 aa14.7□□□□□ -0.06
VCP-201ENST00000358901 NPHP3-ACAD11A0A0J9YXS1 232 aa14.7□□□□□ -0.06
VCP-201ENST00000358901 DENND3A2RUS2 1198 aa14.7□□□□□ -0.06
VCP-201ENST00000358901 PSMA2P25787 234 aa14.7□□□□□ -0.06
VCP-201ENST00000358901 NMT1P30419 496 aaKnown RBP14.7□□□□□ -0.06
VCP-201ENST00000358901 ARL4AP40617 200 aa14.7□□□□□ -0.06
VCP-201ENST00000358901 USP11P51784 963 aa14.7□□□□□ -0.06
VCP-201ENST00000358901 SULF1Q8IWU6 871 aa14.7□□□□□ -0.06
VCP-201ENST00000358901 PPP1R16BQ96T49 567 aa14.7□□□□□ -0.06
VCP-201ENST00000358901 VIPAS39Q9H9C1 493 aa14.7□□□□□ -0.06
VCP-201ENST00000358901 TMEM35BQ8NCS4 154 aa14.7□□□□□ -0.06
VCP-201ENST00000358901 SAAL1Q96ER3 474 aa14.7□□□□□ -0.06
VCP-201ENST00000358901 C7orf25Q9BPX7 421 aa14.7□□□□□ -0.06
VCP-201ENST00000358901 EIF2AK1Q9BQI3 630 aaKnown RBP14.7□□□□□ -0.06
VCP-201ENST00000358901 SLC38A10Q9HBR0 1119 aa14.7□□□□□ -0.06
VCP-201ENST00000358901 GOLGA8MH3BSY2 632 aa14.69□□□□□ -0.06
VCP-201ENST00000358901 KRT14P02533 472 aa14.69□□□□□ -0.06
VCP-201ENST00000358901 COG7P83436 770 aa14.69□□□□□ -0.06
VCP-201ENST00000358901 RBM43Q6ZSC3 357 aaKnown RBP14.69□□□□□ -0.06
VCP-201ENST00000358901 FBXO41Q8TF61 875 aa14.69□□□□□ -0.06
VCP-201ENST00000358901 NOP53Q9NZM5 478 aaKnown RBP14.69□□□□□ -0.06
VCP-201ENST00000358901 PPP1R9AQ9ULJ8 1098 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms