RNA–Protein interactions for RNA: ENST00000358519.8

CNGA1-201, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNGA1, Length 2,627 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-201ENST00000358519 CUEDC2Q9H467 287 aa4.36□□□□□ -1.71
CNGA1-201ENST00000358519 TMEM165Q9HC07 324 aa4.36□□□□□ -1.71
CNGA1-201ENST00000358519 GBA2Q9HCG7 927 aaPredicted RBP4.36□□□□□ -1.71
CNGA1-201ENST00000358519 PIH1D3Q9NQM4 214 aaKnown RBP4.36□□□□□ -1.71
CNGA1-201ENST00000358519 NOP53Q9NZM5 478 aaKnown RBP4.36□□□□□ -1.71
CNGA1-201ENST00000358519 ZFATQ9P243 1243 aa4.36□□□□□ -1.71
CNGA1-201ENST00000358519 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.36□□□□□ -1.71
CNGA1-201ENST00000358519 SIPA1L1O43166 1804 aa4.36□□□□□ -1.71
CNGA1-201ENST00000358519 DPPA5A6NC42 116 aa4.36□□□□□ -1.71
CNGA1-201ENST00000358519 EIF4E1BA6NMX2 242 aaKnown RBP4.36□□□□□ -1.71
CNGA1-201ENST00000358519 STXBP3O00186 592 aa4.36□□□□□ -1.71
CNGA1-201ENST00000358519 PPIP5K2O43314 1243 aa4.36□□□□□ -1.71
CNGA1-201ENST00000358519 PRC1O43663 620 aa4.36□□□□□ -1.71
CNGA1-201ENST00000358519 CYP7A1P22680 504 aa4.36□□□□□ -1.71
CNGA1-201ENST00000358519 SCNN1BP51168 640 aa4.36□□□□□ -1.71
CNGA1-201ENST00000358519 SCNN1DP51172 638 aa4.36□□□□□ -1.71
CNGA1-201ENST00000358519 ZBED6P86452 979 aa4.36□□□□□ -1.71
CNGA1-201ENST00000358519 SLC7A5Q01650 507 aa4.36□□□□□ -1.71
CNGA1-201ENST00000358519 PPARDQ03181 441 aa4.36□□□□□ -1.71
CNGA1-201ENST00000358519 WTAPQ15007 396 aa4.36□□□□□ -1.71
CNGA1-201ENST00000358519 TNIP1Q15025 636 aa4.36□□□□□ -1.71
CNGA1-201ENST00000358519 C12orf60Q5U649 245 aa4.36□□□□□ -1.71
CNGA1-201ENST00000358519 NUGGCQ68CJ6 796 aa4.36□□□□□ -1.71
CNGA1-201ENST00000358519 OTUD7BQ6GQQ9 843 aa4.36□□□□□ -1.71
CNGA1-201ENST00000358519 PPP4R3AQ6IN85 833 aa4.36□□□□□ -1.71
CNGA1-201ENST00000358519 CNGA4Q8IV77 575 aa4.36□□□□□ -1.71
CNGA1-201ENST00000358519 IQCKQ8N0W5 287 aa4.36□□□□□ -1.71
CNGA1-201ENST00000358519 TRIML1Q8N9V2 468 aa4.36□□□□□ -1.71
CNGA1-201ENST00000358519 ATL2Q8NHH9 583 aa4.36□□□□□ -1.71
CNGA1-201ENST00000358519 ENOX1Q8TC92 643 aaKnown RBP4.36□□□□□ -1.71
CNGA1-201ENST00000358519 AGAP11Q8TF27 550 aa4.36□□□□□ -1.71
CNGA1-201ENST00000358519 ZFAND2BQ8WV99 257 aa4.36□□□□□ -1.71
CNGA1-201ENST00000358519 C7orf43Q8WVR3 580 aa4.36□□□□□ -1.71
CNGA1-201ENST00000358519 MKL1Q969V6 931 aa4.36□□□□□ -1.71
CNGA1-201ENST00000358519 C8orf76Q96K31 380 aa4.36□□□□□ -1.71
CNGA1-201ENST00000358519 PHOX2BQ99453 314 aa4.36□□□□□ -1.71
CNGA1-201ENST00000358519 UBAC1Q9BSL1 405 aa4.36□□□□□ -1.71
CNGA1-201ENST00000358519 LRRC1Q9BTT6 524 aa4.36□□□□□ -1.71
CNGA1-201ENST00000358519 ZC3H12CQ9C0D7 883 aaKnown RBP4.36□□□□□ -1.71
CNGA1-201ENST00000358519 PIDD1Q9HB75 910 aa4.36□□□□□ -1.71
CNGA1-201ENST00000358519 NCOA5Q9HCD5 579 aaKnown RBP4.36□□□□□ -1.71
CNGA1-201ENST00000358519 PANK4Q9NVE7 773 aa4.36□□□□□ -1.71
CNGA1-201ENST00000358519 PGAP2Q9UHJ9 254 aa4.36□□□□□ -1.71
CNGA1-201ENST00000358519 DAAM1Q9Y4D1 1078 aa4.36□□□□□ -1.71
CNGA1-201ENST00000358519 SLC4A4Q9Y6R1 1079 aa4.36□□□□□ -1.71
CNGA1-201ENST00000358519 A0A0G2JMZ2 1700 aa4.35□□□□□ -1.71
CNGA1-201ENST00000358519 PIK3R2O00459 728 aa4.35□□□□□ -1.71
CNGA1-201ENST00000358519 ZBTB43O43298 467 aa4.35□□□□□ -1.71
CNGA1-201ENST00000358519 TRAPPC3O43617 180 aa4.35□□□□□ -1.71
CNGA1-201ENST00000358519 FKTNO75072 461 aa4.35□□□□□ -1.71
CNGA1-201ENST00000358519 GYPCP04921 128 aa4.35□□□□□ -1.71
CNGA1-201ENST00000358519 GHRP10912 638 aa4.35□□□□□ -1.71
CNGA1-201ENST00000358519 PDIA3P30101 505 aaKnown RBP4.35□□□□□ -1.71
CNGA1-201ENST00000358519 TXKP42681 527 aa4.35□□□□□ -1.71
CNGA1-201ENST00000358519 PIP4K2AP48426 406 aaPredicted RBP4.35□□□□□ -1.71
CNGA1-201ENST00000358519 TNNI2P48788 182 aa4.35□□□□□ -1.71
CNGA1-201ENST00000358519 SNRPNP63162 240 aaKnown RBP4.35□□□□□ -1.71
CNGA1-201ENST00000358519 MRPS25P82663 173 aaKnown RBP4.35□□□□□ -1.71
CNGA1-201ENST00000358519 SSRP1Q08945 709 aaKnown RBP4.35□□□□□ -1.71
CNGA1-201ENST00000358519 ITGB3BPQ13352 177 aaPredicted RBP4.35□□□□□ -1.71
CNGA1-201ENST00000358519 CUL3Q13618 768 aa4.35□□□□□ -1.71
CNGA1-201ENST00000358519 BYSLQ13895 437 aaKnown RBP4.35□□□□□ -1.71
CNGA1-201ENST00000358519 DBN1Q16643 649 aa4.35□□□□□ -1.71
CNGA1-201ENST00000358519 GLE1Q53GS7 698 aaKnown RBP4.35□□□□□ -1.71
CNGA1-201ENST00000358519 GPATCH4Q5T3I0 446 aaKnown RBP4.35□□□□□ -1.71
CNGA1-201ENST00000358519 ANO1Q5XXA6 986 aa4.35□□□□□ -1.71
CNGA1-201ENST00000358519 ARL6IP4Q66PJ3 421 aaKnown RBP4.35□□□□□ -1.71
CNGA1-201ENST00000358519 EMBQ6PCB8 327 aa4.35□□□□□ -1.71
CNGA1-201ENST00000358519 ARMCX6Q7L4S7 300 aa4.35□□□□□ -1.71
CNGA1-201ENST00000358519 ZNF589Q86UQ0 364 aaPredicted RBP4.35□□□□□ -1.71
CNGA1-201ENST00000358519 CD163Q86VB7 1156 aa4.35□□□□□ -1.71
CNGA1-201ENST00000358519 CACNA2D3Q8IZS8 1091 aa4.35□□□□□ -1.71
CNGA1-201ENST00000358519 MAGEB6Q8N7X4 407 aa4.35□□□□□ -1.71
CNGA1-201ENST00000358519 IGDCC4Q8TDY8 1250 aa4.35□□□□□ -1.71
CNGA1-201ENST00000358519 DCAF4Q8WV16 495 aa4.35□□□□□ -1.71
CNGA1-201ENST00000358519 P3H4Q92791 437 aa4.35□□□□□ -1.71
CNGA1-201ENST00000358519 FOXJ1Q92949 421 aa4.35□□□□□ -1.71
CNGA1-201ENST00000358519 CAVIN3Q969G5 261 aa4.35□□□□□ -1.71
CNGA1-201ENST00000358519 TEKT1Q969V4 418 aa4.35□□□□□ -1.71
CNGA1-201ENST00000358519 FERMT2Q96AC1 680 aa4.35□□□□□ -1.71
CNGA1-201ENST00000358519 IQCDQ96DY2 449 aa4.35□□□□□ -1.71
CNGA1-201ENST00000358519 ZNF594Q96JF6 807 aaPredicted RBP4.35□□□□□ -1.71
CNGA1-201ENST00000358519 ATP6V1G3Q96LB4 118 aa4.35□□□□□ -1.71
CNGA1-201ENST00000358519 MED15Q96RN5 788 aa4.35□□□□□ -1.71
CNGA1-201ENST00000358519 OSBPL1AQ9BXW6 950 aa4.35□□□□□ -1.71
CNGA1-201ENST00000358519 TRIM4Q9C037 500 aa4.35□□□□□ -1.71
CNGA1-201ENST00000358519 DEFB129Q9H1M3 183 aa4.35□□□□□ -1.71
CNGA1-201ENST00000358519 MMADHCQ9H3L0 296 aaPredicted RBP4.35□□□□□ -1.71
CNGA1-201ENST00000358519 RMI1Q9H9A7 625 aa4.35□□□□□ -1.71
CNGA1-201ENST00000358519 GPRC5DQ9NZD1 345 aa4.35□□□□□ -1.71
CNGA1-201ENST00000358519 HPSEQ9Y251 543 aa4.35□□□□□ -1.71
CNGA1-201ENST00000358519 MYH4Q9Y623 1939 aa4.35□□□□□ -1.71
CNGA1-201ENST00000358519 ARID1BQ8NFD5 2236 aaPredicted RBP4.35□□□□□ -1.71
CNGA1-201ENST00000358519 LRRD1A4D1F6 860 aa4.35□□□□□ -1.71
CNGA1-201ENST00000358519 FAM155AB1AL88 458 aaPredicted RBP4.35□□□□□ -1.71
CNGA1-201ENST00000358519 LUC7L3O95232 432 aaKnown RBP4.35□□□□□ -1.71
CNGA1-201ENST00000358519 MBD4O95243 580 aa4.35□□□□□ -1.71
CNGA1-201ENST00000358519 HOXC6P09630 235 aa4.35□□□□□ -1.71
CNGA1-201ENST00000358519 FDPSP14324 419 aaKnown RBP4.35□□□□□ -1.71
CNGA1-201ENST00000358519 ADORA1P30542 326 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms