RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 MAPK7Q13164 816 aa16.49■□□□□ 0.23
CCNE1-202ENST00000357943 PTK7Q13308 1070 aa16.49■□□□□ 0.23
CCNE1-202ENST00000357943 CUL4BQ13620 913 aa16.49■□□□□ 0.23
CCNE1-202ENST00000357943 SUCLA2Q9P2R7 463 aaPredicted RBP16.49■□□□□ 0.23
CCNE1-202ENST00000357943 AKT3Q9Y243 479 aa16.49■□□□□ 0.23
CCNE1-202ENST00000357943 TLR3O15455 904 aaKnown RBP16.48■□□□□ 0.23
CCNE1-202ENST00000357943 VTNP04004 478 aa16.48■□□□□ 0.23
CCNE1-202ENST00000357943 ARL2P36404 184 aa16.48■□□□□ 0.23
CCNE1-202ENST00000357943 DNM2P50570 870 aa16.48■□□□□ 0.23
CCNE1-202ENST00000357943 TMEM62Q0P6H9 643 aa16.48■□□□□ 0.23
CCNE1-202ENST00000357943 KSR1Q8IVT5 923 aa16.48■□□□□ 0.23
CCNE1-202ENST00000357943 PRPF31Q8WWY3 499 aaKnown RBP16.48■□□□□ 0.23
CCNE1-202ENST00000357943 PPP1R16BQ96T49 567 aa16.48■□□□□ 0.23
CCNE1-202ENST00000357943 C7orf25Q9BPX7 421 aa16.48■□□□□ 0.23
CCNE1-202ENST00000357943 POLR3FQ9H1D9 316 aaPredicted RBP16.48■□□□□ 0.23
CCNE1-202ENST00000357943 LOXHD1Q8IVV2 1947 aa16.48■□□□□ 0.23
CCNE1-202ENST00000357943 RBAK-RBAKDNI3L0D1 243 aa16.48■□□□□ 0.23
CCNE1-202ENST00000357943 MDM2Q00987 491 aaPredicted RBP16.48■□□□□ 0.23
CCNE1-202ENST00000357943 TRIM71Q2Q1W2 868 aaKnown RBP16.48■□□□□ 0.23
CCNE1-202ENST00000357943 IER5Q5VY09 327 aa16.48■□□□□ 0.23
CCNE1-202ENST00000357943 KANK3Q6NY19 840 aa16.48■□□□□ 0.23
CCNE1-202ENST00000357943 RHPN2Q8IUC4 686 aa16.48■□□□□ 0.23
CCNE1-202ENST00000357943 ASAP3Q8TDY4 903 aa16.48■□□□□ 0.23
CCNE1-202ENST00000357943 TCP11Q8WWU5 503 aa16.48■□□□□ 0.23
CCNE1-202ENST00000357943 PSPC1Q8WXF1 523 aaKnown RBP16.48■□□□□ 0.23
CCNE1-202ENST00000357943 ERCC4Q92889 916 aaPredicted RBP16.48■□□□□ 0.23
CCNE1-202ENST00000357943 ZNF668Q96K58 619 aaPredicted RBP16.48■□□□□ 0.23
CCNE1-202ENST00000357943 MAP7D2Q96T17 732 aa16.48■□□□□ 0.23
CCNE1-202ENST00000357943 TIPINQ9BVW5 301 aa16.48■□□□□ 0.23
CCNE1-202ENST00000357943 LRRC27Q9C0I9 530 aa16.48■□□□□ 0.23
CCNE1-202ENST00000357943 ODF2LQ9ULJ1 636 aa16.48■□□□□ 0.23
CCNE1-202ENST00000357943 MBD3O95983 291 aa16.47■□□□□ 0.23
CCNE1-202ENST00000357943 GLRA2P23416 452 aa16.47■□□□□ 0.23
CCNE1-202ENST00000357943 THPOP40225 353 aa16.47■□□□□ 0.23
CCNE1-202ENST00000357943 PNOCQ13519 176 aa16.47■□□□□ 0.23
CCNE1-202ENST00000357943 POSTNQ15063 836 aa16.47■□□□□ 0.23
CCNE1-202ENST00000357943 CAMK4Q16566 473 aa16.47■□□□□ 0.23
CCNE1-202ENST00000357943 RPAINQ86UA6 219 aa16.47■□□□□ 0.23
CCNE1-202ENST00000357943 BSNDQ8WZ55 320 aa16.47■□□□□ 0.23
CCNE1-202ENST00000357943 KIFAP3Q92845 792 aa16.47■□□□□ 0.23
CCNE1-202ENST00000357943 COL4A3BPQ9Y5P4 624 aa16.47■□□□□ 0.23
CCNE1-202ENST00000357943 GTPBP6O43824 516 aaPredicted RBP16.46■□□□□ 0.23
CCNE1-202ENST00000357943 CLTBP09497 229 aa16.46■□□□□ 0.23
CCNE1-202ENST00000357943 CTSHP09668 335 aa16.46■□□□□ 0.23
CCNE1-202ENST00000357943 CKBP12277 381 aa16.46■□□□□ 0.23
CCNE1-202ENST00000357943 IDEP14735 1019 aa16.46■□□□□ 0.23
CCNE1-202ENST00000357943 NLRP11P59045 1033 aaKnown RBP16.46■□□□□ 0.23
CCNE1-202ENST00000357943 ASIC1P78348 528 aa16.46■□□□□ 0.23
CCNE1-202ENST00000357943 LAMTOR4Q0VGL1 99 aa16.46■□□□□ 0.23
CCNE1-202ENST00000357943 CNNM4Q6P4Q7 775 aa16.46■□□□□ 0.23
CCNE1-202ENST00000357943 CCDC34Q96HJ3 373 aa16.46■□□□□ 0.23
CCNE1-202ENST00000357943 DRC1Q96MC2 740 aa16.46■□□□□ 0.23
CCNE1-202ENST00000357943 ZHX3Q9H4I2 956 aa16.46■□□□□ 0.23
CCNE1-202ENST00000357943 PCDH10Q9P2E7 1040 aa16.46■□□□□ 0.23
CCNE1-202ENST00000357943 TBX21Q9UL17 535 aa16.46■□□□□ 0.23
CCNE1-202ENST00000357943 EVPLQ92817 2033 aa16.46■□□□□ 0.23
CCNE1-202ENST00000357943 FRMD3A2A2Y4 597 aa16.45■□□□□ 0.22
CCNE1-202ENST00000357943 GPR32O75388 356 aa16.45■□□□□ 0.22
CCNE1-202ENST00000357943 FAM13AO94988 1023 aa16.45■□□□□ 0.22
CCNE1-202ENST00000357943 GPC3P51654 580 aa16.45■□□□□ 0.22
CCNE1-202ENST00000357943 ZNF131P52739 623 aa16.45■□□□□ 0.22
CCNE1-202ENST00000357943 PEX3P56589 373 aa16.45■□□□□ 0.22
CCNE1-202ENST00000357943 DPYDQ12882 1025 aa16.45■□□□□ 0.22
CCNE1-202ENST00000357943 CAPSQ13938 189 aa16.45■□□□□ 0.22
CCNE1-202ENST00000357943 MXD4Q14582 209 aaPredicted RBP16.45■□□□□ 0.22
CCNE1-202ENST00000357943 KIZQ2M2Z5 673 aa16.45■□□□□ 0.22
CCNE1-202ENST00000357943 ZNF618Q5T7W0 954 aa16.45■□□□□ 0.22
CCNE1-202ENST00000357943 RSPH3Q86UC2 560 aa16.45■□□□□ 0.22
CCNE1-202ENST00000357943 ELOA2Q8IYF1 753 aaPredicted RBP16.45■□□□□ 0.22
CCNE1-202ENST00000357943 NME8Q8N427 588 aa16.45■□□□□ 0.22
CCNE1-202ENST00000357943 CAGE1Q8TC20 777 aa16.45■□□□□ 0.22
CCNE1-202ENST00000357943 NLRP4Q96MN2 994 aa16.45■□□□□ 0.22
CCNE1-202ENST00000357943 CDHR5Q9HBB8 845 aa16.45■□□□□ 0.22
CCNE1-202ENST00000357943 PARVGQ9HBI0 331 aa16.45■□□□□ 0.22
CCNE1-202ENST00000357943 TMEM39AQ9NV64 488 aa16.45■□□□□ 0.22
CCNE1-202ENST00000357943 GINS2Q9Y248 185 aa16.45■□□□□ 0.22
CCNE1-202ENST00000357943 UMODL1Q5DID0 1318 aa16.45■□□□□ 0.22
CCNE1-202ENST00000357943 TRIM43BA6NCK2 446 aa16.45■□□□□ 0.22
CCNE1-202ENST00000357943 KLRC4O43908 158 aa16.45■□□□□ 0.22
CCNE1-202ENST00000357943 TBCAO75347 108 aaKnown RBP16.45■□□□□ 0.22
CCNE1-202ENST00000357943 MYL1P05976 194 aa16.45■□□□□ 0.22
CCNE1-202ENST00000357943 SRGAP2CP0DJJ0 459 aa16.45■□□□□ 0.22
CCNE1-202ENST00000357943 MRPS6P82932 125 aaKnown RBP16.45■□□□□ 0.22
CCNE1-202ENST00000357943 MGAT3Q09327 533 aa16.45■□□□□ 0.22
CCNE1-202ENST00000357943 MYCT1Q8N699 235 aa16.45■□□□□ 0.22
CCNE1-202ENST00000357943 RNF149Q8NC42 400 aa16.45■□□□□ 0.22
CCNE1-202ENST00000357943 TRIM43Q96BQ3 446 aaPredicted RBP16.45■□□□□ 0.22
CCNE1-202ENST00000357943 HTATIP2Q9BUP3 242 aa16.45■□□□□ 0.22
CCNE1-202ENST00000357943 KIFC3Q9BVG8 833 aa16.45■□□□□ 0.22
CCNE1-202ENST00000357943 NOC4LQ9BVI4 516 aaKnown RBP16.45■□□□□ 0.22
CCNE1-202ENST00000357943 ADAMTS10Q9H324 1103 aa16.45■□□□□ 0.22
CCNE1-202ENST00000357943 HIPK3Q9H422 1215 aa16.45■□□□□ 0.22
CCNE1-202ENST00000357943 CLSTN2Q9H4D0 955 aa16.45■□□□□ 0.22
CCNE1-202ENST00000357943 PRDM5Q9NQX1 630 aaPredicted RBP16.45■□□□□ 0.22
CCNE1-202ENST00000357943 PANK4Q9NVE7 773 aa16.45■□□□□ 0.22
CCNE1-202ENST00000357943 CDY2AQ9Y6F7 541 aa16.45■□□□□ 0.22
CCNE1-202ENST00000357943 A0A087WZ62 844 aa16.44■□□□□ 0.22
CCNE1-202ENST00000357943 CHRNA1P02708 482 aa16.44■□□□□ 0.22
CCNE1-202ENST00000357943 PLS3P13797 630 aa16.44■□□□□ 0.22
CCNE1-202ENST00000357943 PTMSP20962 102 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms