RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 TPP2P29144 1249 aaPredicted RBP8.92□□□□□ -0.98
CDC42SE1-201ENST00000357235 ECHS1P30084 290 aa8.92□□□□□ -0.98
CDC42SE1-201ENST00000357235 CASP4P49662 377 aa8.92□□□□□ -0.98
CDC42SE1-201ENST00000357235 CTCFP49711 727 aaPredicted RBP8.92□□□□□ -0.98
CDC42SE1-201ENST00000357235 SNAP25P60880 206 aa8.92□□□□□ -0.98
CDC42SE1-201ENST00000357235 PSMC6P62333 389 aa8.92□□□□□ -0.98
CDC42SE1-201ENST00000357235 COBLL1Q53SF7 1204 aa8.92□□□□□ -0.98
CDC42SE1-201ENST00000357235 PRR16Q569H4 304 aa8.92□□□□□ -0.98
CDC42SE1-201ENST00000357235 MFSD14BQ5SR56 506 aa8.92□□□□□ -0.98
CDC42SE1-201ENST00000357235 PPP4R3AQ6IN85 833 aa8.92□□□□□ -0.98
CDC42SE1-201ENST00000357235 CLEC4GQ6UXB4 293 aa8.92□□□□□ -0.98
CDC42SE1-201ENST00000357235 MYLK4Q86YV6 388 aaPredicted RBP8.92□□□□□ -0.98
CDC42SE1-201ENST00000357235 GLYCTKQ8IVS8 523 aa8.92□□□□□ -0.98
CDC42SE1-201ENST00000357235 CD302Q8IX05 232 aa8.92□□□□□ -0.98
CDC42SE1-201ENST00000357235 ADGRF4Q8IZF3 695 aa8.92□□□□□ -0.98
CDC42SE1-201ENST00000357235 RDH13Q8NBN7 331 aa8.92□□□□□ -0.98
CDC42SE1-201ENST00000357235 TPCN2Q8NHX9 752 aa8.92□□□□□ -0.98
CDC42SE1-201ENST00000357235 RBM46Q8TBY0 533 aaKnown RBP8.92□□□□□ -0.98
CDC42SE1-201ENST00000357235 SYN2Q92777 582 aaPredicted RBP8.92□□□□□ -0.98
CDC42SE1-201ENST00000357235 PBKQ96KB5 322 aa8.92□□□□□ -0.98
CDC42SE1-201ENST00000357235 ZNF570Q96NI8 536 aa8.92□□□□□ -0.98
CDC42SE1-201ENST00000357235 FMO2Q99518 471 aa8.92□□□□□ -0.98
CDC42SE1-201ENST00000357235 AIPL1Q9NZN9 384 aa8.92□□□□□ -0.98
CDC42SE1-201ENST00000357235 ZFATQ9P243 1243 aa8.92□□□□□ -0.98
CDC42SE1-201ENST00000357235 USP17L10C9JJH3 530 aa8.91□□□□□ -0.98
CDC42SE1-201ENST00000357235 TRAPPC3O43617 180 aa8.91□□□□□ -0.98
CDC42SE1-201ENST00000357235 EDIL3O43854 480 aa8.91□□□□□ -0.98
CDC42SE1-201ENST00000357235 DIAPH2O60879 1101 aa8.91□□□□□ -0.98
CDC42SE1-201ENST00000357235 DNAJC8O75937 253 aaPredicted RBP8.91□□□□□ -0.98
CDC42SE1-201ENST00000357235 AFPP02771 609 aaKnown RBP8.91□□□□□ -0.98
CDC42SE1-201ENST00000357235 VIMP08670 466 aaKnown RBP8.91□□□□□ -0.98
CDC42SE1-201ENST00000357235 ATP4AP20648 1035 aa8.91□□□□□ -0.98
CDC42SE1-201ENST00000357235 KCNA1Q09470 495 aa8.91□□□□□ -0.98
CDC42SE1-201ENST00000357235 IKQ13123 557 aaPredicted RBP8.91□□□□□ -0.98
CDC42SE1-201ENST00000357235 LACTB2Q53H82 288 aaPredicted RBP8.91□□□□□ -0.98
CDC42SE1-201ENST00000357235 MTHFD1LQ6UB35 978 aa8.91□□□□□ -0.98
CDC42SE1-201ENST00000357235 IRF2BP2Q7Z5L9 587 aa8.91□□□□□ -0.98
CDC42SE1-201ENST00000357235 CCDC25Q86WR0 208 aa8.91□□□□□ -0.98
CDC42SE1-201ENST00000357235 SFR1Q86XK3 245 aa8.91□□□□□ -0.98
CDC42SE1-201ENST00000357235 P3H4Q92791 437 aa8.91□□□□□ -0.98
CDC42SE1-201ENST00000357235 HVCN1Q96D96 273 aa8.91□□□□□ -0.98
CDC42SE1-201ENST00000357235 CEP63Q96MT8 703 aa8.91□□□□□ -0.98
CDC42SE1-201ENST00000357235 NT5C3AQ9H0P0 336 aa8.91□□□□□ -0.98
CDC42SE1-201ENST00000357235 GANQ9H2C0 597 aa8.91□□□□□ -0.98
CDC42SE1-201ENST00000357235 SNX24Q9Y343 169 aa8.91□□□□□ -0.98
CDC42SE1-201ENST00000357235 COL16A1Q07092 1604 aaPredicted RBP8.91□□□□□ -0.98
CDC42SE1-201ENST00000357235 RSPH10B2B2RC85 870 aa8.91□□□□□ -0.98
CDC42SE1-201ENST00000357235 AKAP3O75969 853 aa8.91□□□□□ -0.98
CDC42SE1-201ENST00000357235 RNF8O76064 485 aa8.91□□□□□ -0.98
CDC42SE1-201ENST00000357235 SHBGP04278 402 aa8.91□□□□□ -0.98
CDC42SE1-201ENST00000357235 RSPH10BP0C881 870 aa8.91□□□□□ -0.98
CDC42SE1-201ENST00000357235 MYBP10242 640 aa8.91□□□□□ -0.98
CDC42SE1-201ENST00000357235 AKR1B1P15121 316 aa8.91□□□□□ -0.98
CDC42SE1-201ENST00000357235 CYP11B2P19099 503 aa8.91□□□□□ -0.98
CDC42SE1-201ENST00000357235 PON1P27169 355 aa8.91□□□□□ -0.98
CDC42SE1-201ENST00000357235 RFC4P35249 363 aa8.91□□□□□ -0.98
CDC42SE1-201ENST00000357235 CUL3Q13618 768 aa8.91□□□□□ -0.98
CDC42SE1-201ENST00000357235 ARHGAP44Q17R89 818 aa8.91□□□□□ -0.98
CDC42SE1-201ENST00000357235 TMEM119Q4V9L6 283 aa8.91□□□□□ -0.98
CDC42SE1-201ENST00000357235 FAM133BQ5BKY9 247 aaKnown RBP8.91□□□□□ -0.98
CDC42SE1-201ENST00000357235 SLC30A10Q6XR72 485 aa8.91□□□□□ -0.98
CDC42SE1-201ENST00000357235 C16orf86Q6ZW13 317 aa8.91□□□□□ -0.98
CDC42SE1-201ENST00000357235 ZNF804AQ7Z570 1209 aa8.91□□□□□ -0.98
CDC42SE1-201ENST00000357235 TMC3Q7Z5M5 1100 aa8.91□□□□□ -0.98
CDC42SE1-201ENST00000357235 GALNT15Q8N3T1 639 aa8.91□□□□□ -0.98
CDC42SE1-201ENST00000357235 MGARPQ8TDB4 240 aa8.91□□□□□ -0.98
CDC42SE1-201ENST00000357235 CCDC97Q96F63 343 aaPredicted RBP8.91□□□□□ -0.98
CDC42SE1-201ENST00000357235 TRIM4Q9C037 500 aa8.91□□□□□ -0.98
CDC42SE1-201ENST00000357235 PRDM16Q9HAZ2 1276 aa8.91□□□□□ -0.98
CDC42SE1-201ENST00000357235 TMOD4Q9NZQ9 345 aa8.91□□□□□ -0.98
CDC42SE1-201ENST00000357235 SLC12A6Q9UHW9 1150 aa8.91□□□□□ -0.98
CDC42SE1-201ENST00000357235 AJAP1Q9UKB5 411 aaPredicted RBP8.91□□□□□ -0.98
CDC42SE1-201ENST00000357235 AMFRQ9UKV5 643 aa8.91□□□□□ -0.98
CDC42SE1-201ENST00000357235 CD2APQ9Y5K6 639 aa8.91□□□□□ -0.98
CDC42SE1-201ENST00000357235 A6NHS1 94 aa8.91□□□□□ -0.98
CDC42SE1-201ENST00000357235 H0YGN5 161 aa8.91□□□□□ -0.98
CDC42SE1-201ENST00000357235 LRRN2O75325 713 aa8.91□□□□□ -0.98
CDC42SE1-201ENST00000357235 MED24O75448 989 aa8.91□□□□□ -0.98
CDC42SE1-201ENST00000357235 UFL1O94874 794 aa8.91□□□□□ -0.98
CDC42SE1-201ENST00000357235 BIRC3Q13489 604 aa8.91□□□□□ -0.98
CDC42SE1-201ENST00000357235 MTMR3Q13615 1198 aa8.91□□□□□ -0.98
CDC42SE1-201ENST00000357235 DBN1Q16643 649 aa8.91□□□□□ -0.98
CDC42SE1-201ENST00000357235 CCDC38Q502W7 563 aa8.91□□□□□ -0.98
CDC42SE1-201ENST00000357235 TRMT1LQ7Z2T5 733 aaKnown RBP8.91□□□□□ -0.98
CDC42SE1-201ENST00000357235 SCFD2Q8WU76 684 aa8.91□□□□□ -0.98
CDC42SE1-201ENST00000357235 RBM41Q96IZ5 413 aaKnown RBP8.91□□□□□ -0.98
CDC42SE1-201ENST00000357235 GORASP1Q9BQQ3 440 aa8.91□□□□□ -0.98
CDC42SE1-201ENST00000357235 FAM167BQ9BTA0 163 aa8.91□□□□□ -0.98
CDC42SE1-201ENST00000357235 RTFDC1Q9BY42 306 aaPredicted RBP8.91□□□□□ -0.98
CDC42SE1-201ENST00000357235 NYXQ9GZU5 481 aa8.91□□□□□ -0.98
CDC42SE1-201ENST00000357235 JMJD4Q9H9V9 463 aa8.91□□□□□ -0.98
CDC42SE1-201ENST00000357235 NFS1Q9Y697 457 aa8.91□□□□□ -0.98
CDC42SE1-201ENST00000357235 SHANK3Q9BYB0 1731 aa8.9□□□□□ -0.98
CDC42SE1-201ENST00000357235 MMEP08473 750 aa8.9□□□□□ -0.98
CDC42SE1-201ENST00000357235 GALCP54803 685 aa8.9□□□□□ -0.98
CDC42SE1-201ENST00000357235 RIPK1Q13546 671 aa8.9□□□□□ -0.98
CDC42SE1-201ENST00000357235 PLS1Q14651 629 aa8.9□□□□□ -0.98
CDC42SE1-201ENST00000357235 USH1GQ495M9 461 aa8.9□□□□□ -0.98
CDC42SE1-201ENST00000357235 EMC10Q5UCC4 262 aa8.9□□□□□ -0.98
CDC42SE1-201ENST00000357235 AADACL2Q6P093 401 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 166.7 ms