RNA–Protein interactions for RNA: ENST00000356922.5

LIG4-201, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-201ENST00000356922 EHHADHQ08426 723 aa4.48□□□□□ -1.69
LIG4-201ENST00000356922 PTGISQ16647 500 aa4.48□□□□□ -1.69
LIG4-201ENST00000356922 KIZQ2M2Z5 673 aa4.48□□□□□ -1.69
LIG4-201ENST00000356922 HAUS3Q68CZ6 603 aa4.48□□□□□ -1.69
LIG4-201ENST00000356922 CAVIN1Q6NZI2 390 aaKnown RBP4.48□□□□□ -1.69
LIG4-201ENST00000356922 CDR2LQ86X02 465 aaPredicted RBP4.48□□□□□ -1.69
LIG4-201ENST00000356922 TNS4Q8IZW8 715 aa4.48□□□□□ -1.69
LIG4-201ENST00000356922 ZSWIM2Q8NEG5 633 aa4.48□□□□□ -1.69
LIG4-201ENST00000356922 SPATA20Q8TB22 786 aa4.48□□□□□ -1.69
LIG4-201ENST00000356922 EEF2KMTQ96G04 330 aa4.48□□□□□ -1.69
LIG4-201ENST00000356922 CALML4Q96GE6 196 aa4.48□□□□□ -1.69
LIG4-201ENST00000356922 TSEN34Q9BSV6 310 aaKnown RBP4.48□□□□□ -1.69
LIG4-201ENST00000356922 TMEM106CQ9BVX2 250 aa4.48□□□□□ -1.69
LIG4-201ENST00000356922 RAB34Q9BZG1 259 aa4.48□□□□□ -1.69
LIG4-201ENST00000356922 GZF1Q9H116 711 aaPredicted RBP4.48□□□□□ -1.69
LIG4-201ENST00000356922 SPC25Q9HBM1 224 aa4.48□□□□□ -1.69
LIG4-201ENST00000356922 TUBE1Q9UJT0 475 aa4.48□□□□□ -1.69
LIG4-201ENST00000356922 DBR1Q9UK59 544 aaKnown RBP4.48□□□□□ -1.69
LIG4-201ENST00000356922 GINS2Q9Y248 185 aa4.48□□□□□ -1.69
LIG4-201ENST00000356922 ARID2Q68CP9 1835 aa4.47□□□□□ -1.69
LIG4-201ENST00000356922 TRAK2O60296 914 aa4.47□□□□□ -1.69
LIG4-201ENST00000356922 GPR32O75388 356 aa4.47□□□□□ -1.69
LIG4-201ENST00000356922 CTSHP09668 335 aa4.47□□□□□ -1.69
LIG4-201ENST00000356922 SRGAP2CP0DJJ0 459 aa4.47□□□□□ -1.69
LIG4-201ENST00000356922 CD44P16070 742 aaKnown RBP4.47□□□□□ -1.69
LIG4-201ENST00000356922 NMT1P30419 496 aaKnown RBP4.47□□□□□ -1.69
LIG4-201ENST00000356922 ARL2P36404 184 aa4.47□□□□□ -1.69
LIG4-201ENST00000356922 SARSP49591 514 aaKnown RBP4.47□□□□□ -1.69
LIG4-201ENST00000356922 EMC2Q15006 297 aa4.47□□□□□ -1.69
LIG4-201ENST00000356922 FAM160B1Q5W0V3 765 aa4.47□□□□□ -1.69
LIG4-201ENST00000356922 SERINC5Q86VE9 423 aa4.47□□□□□ -1.69
LIG4-201ENST00000356922 CNNM3Q8NE01 707 aa4.47□□□□□ -1.69
LIG4-201ENST00000356922 ERMNQ8TAM6 284 aa4.47□□□□□ -1.69
LIG4-201ENST00000356922 SCLYQ96I15 445 aa4.47□□□□□ -1.69
LIG4-201ENST00000356922 CXCL16Q9H2A7 254 aa4.47□□□□□ -1.69
LIG4-201ENST00000356922 AGO3Q9H9G7 860 aaKnown RBP4.47□□□□□ -1.69
LIG4-201ENST00000356922 ANKEF1Q9NU02 776 aa4.47□□□□□ -1.69
LIG4-201ENST00000356922 FAM13BQ9NYF5 915 aa4.47□□□□□ -1.69
LIG4-201ENST00000356922 GDAQ9Y2T3 454 aa4.47□□□□□ -1.69
LIG4-201ENST00000356922 NRCAMQ92823 1304 aa4.47□□□□□ -1.69
LIG4-201ENST00000356922 LOXHD1Q8IVV2 1947 aa4.47□□□□□ -1.69
LIG4-201ENST00000356922 ARHGEF35A5YM69 484 aa4.47□□□□□ -1.69
LIG4-201ENST00000356922 KBTBD13C9JR72 458 aa4.47□□□□□ -1.69
LIG4-201ENST00000356922 XRCC6P12956 609 aaKnown RBP eCLIP4.47□□□□□ -1.69
LIG4-201ENST00000356922 TBC1D8BQ0IIM8 1120 aa4.47□□□□□ -1.69
LIG4-201ENST00000356922 CAPSQ13938 189 aa4.47□□□□□ -1.69
LIG4-201ENST00000356922 ZNF618Q5T7W0 954 aa4.47□□□□□ -1.69
LIG4-201ENST00000356922 FAM102BQ5T8I3 360 aa4.47□□□□□ -1.69
LIG4-201ENST00000356922 CCDC73Q6ZRK6 1079 aa4.47□□□□□ -1.69
LIG4-201ENST00000356922 SV2BQ7L1I2 683 aa4.47□□□□□ -1.69
LIG4-201ENST00000356922 RHPN2Q8IUC4 686 aa4.47□□□□□ -1.69
LIG4-201ENST00000356922 TMEM130Q8N3G9 435 aa4.47□□□□□ -1.69
LIG4-201ENST00000356922 KIAA0895Q8NCT3 520 aa4.47□□□□□ -1.69
LIG4-201ENST00000356922 CDK5RAP3Q96JB5 506 aa4.47□□□□□ -1.69
LIG4-201ENST00000356922 NT5C3AQ9H0P0 336 aa4.47□□□□□ -1.69
LIG4-201ENST00000356922 ADAMTS10Q9H324 1103 aa4.47□□□□□ -1.69
LIG4-201ENST00000356922 NRBP2Q9NSY0 501 aa4.47□□□□□ -1.69
LIG4-201ENST00000356922 ZNF215Q9UL58 517 aaPredicted RBP4.47□□□□□ -1.69
LIG4-201ENST00000356922 ATP11BQ9Y2G3 1177 aa4.47□□□□□ -1.69
LIG4-201ENST00000356922 A0A087WZ62 844 aa4.47□□□□□ -1.69
LIG4-201ENST00000356922 C17orf102A2RUQ5 167 aa4.47□□□□□ -1.69
LIG4-201ENST00000356922 B4GALT5O43286 388 aa4.47□□□□□ -1.69
LIG4-201ENST00000356922 IDEP14735 1019 aa4.47□□□□□ -1.69
LIG4-201ENST00000356922 SYN1P17600 705 aa4.47□□□□□ -1.69
LIG4-201ENST00000356922 CYP2C18P33260 490 aa4.47□□□□□ -1.69
LIG4-201ENST00000356922 SLC26A2P50443 739 aa4.47□□□□□ -1.69
LIG4-201ENST00000356922 POLGP54098 1239 aaPredicted RBP4.47□□□□□ -1.69
LIG4-201ENST00000356922 CCL23P55773 120 aa4.47□□□□□ -1.69
LIG4-201ENST00000356922 NLRP11P59045 1033 aaKnown RBP4.47□□□□□ -1.69
LIG4-201ENST00000356922 LAMTOR4Q0VGL1 99 aa4.47□□□□□ -1.69
LIG4-201ENST00000356922 SCN5AQ14524 2016 aa4.47□□□□□ -1.69
LIG4-201ENST00000356922 SNX17Q15036 470 aa4.47□□□□□ -1.69
LIG4-201ENST00000356922 POSTNQ15063 836 aa4.47□□□□□ -1.69
LIG4-201ENST00000356922 KMT5BQ4FZB7 885 aa4.47□□□□□ -1.69
LIG4-201ENST00000356922 SCARA3Q6AZY7 606 aa4.47□□□□□ -1.69
LIG4-201ENST00000356922 PKNOX2Q96KN3 472 aa4.47□□□□□ -1.69
LIG4-201ENST00000356922 C7orf25Q9BPX7 421 aa4.47□□□□□ -1.69
LIG4-201ENST00000356922 FDXACB1Q9BRP7 624 aaPredicted RBP4.47□□□□□ -1.69
LIG4-201ENST00000356922 HAPLN2Q9GZV7 340 aa4.47□□□□□ -1.69
LIG4-201ENST00000356922 WNT8AQ9H1J5 351 aa4.47□□□□□ -1.69
LIG4-201ENST00000356922 C11orf49Q9H6J7 331 aa4.47□□□□□ -1.69
LIG4-201ENST00000356922 SLC39A2Q9NP94 309 aa4.47□□□□□ -1.69
LIG4-201ENST00000356922 RNF19AQ9NV58 838 aa4.47□□□□□ -1.69
LIG4-201ENST00000356922 SUCLA2Q9P2R7 463 aaPredicted RBP4.47□□□□□ -1.69
LIG4-201ENST00000356922 CCDC39Q9UFE4 941 aa4.47□□□□□ -1.69
LIG4-201ENST00000356922 FRMD3A2A2Y4 597 aa4.46□□□□□ -1.69
LIG4-201ENST00000356922 SLC16A4O15374 487 aa4.46□□□□□ -1.69
LIG4-201ENST00000356922 MYBP10242 640 aa4.46□□□□□ -1.69
LIG4-201ENST00000356922 CKBP12277 381 aa4.46□□□□□ -1.69
LIG4-201ENST00000356922 NPTX2P47972 431 aa4.46□□□□□ -1.69
LIG4-201ENST00000356922 ZNF131P52739 623 aa4.46□□□□□ -1.69
LIG4-201ENST00000356922 PMS1P54277 932 aaKnown RBP4.46□□□□□ -1.69
LIG4-201ENST00000356922 EPHB4P54760 987 aa4.46□□□□□ -1.69
LIG4-201ENST00000356922 PEX3P56589 373 aa4.46□□□□□ -1.69
LIG4-201ENST00000356922 RTP1P59025 263 aa4.46□□□□□ -1.69
LIG4-201ENST00000356922 BRDTQ58F21 947 aaPredicted RBP4.46□□□□□ -1.69
LIG4-201ENST00000356922 C16orf59Q7L2K0 433 aa4.46□□□□□ -1.69
LIG4-201ENST00000356922 ANKRD33Q7Z3H0 272 aa4.46□□□□□ -1.69
LIG4-201ENST00000356922 SESTD1Q86VW0 696 aa4.46□□□□□ -1.69
LIG4-201ENST00000356922 SFR1Q86XK3 245 aa4.46□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms