RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 KSR1Q8IVT5 923 aa20.02■□□□□ 0.8
SMARCD3-202ENST00000356800 SLC7A3Q8WY07 619 aa20.02■□□□□ 0.8
SMARCD3-202ENST00000356800 TMEM143Q96AN5 459 aa20.02■□□□□ 0.8
SMARCD3-202ENST00000356800 TRIM44Q96DX7 344 aaPredicted RBP20.02■□□□□ 0.8
SMARCD3-202ENST00000356800 POLR3FQ9H1D9 316 aaPredicted RBP20.02■□□□□ 0.8
SMARCD3-202ENST00000356800 TUT1Q9H6E5 874 aaKnown RBP20.02■□□□□ 0.8
SMARCD3-202ENST00000356800 KAT6AQ92794 2004 aa20.02■□□□□ 0.8
SMARCD3-202ENST00000356800 RTP1P59025 263 aa20.01■□□□□ 0.79
SMARCD3-202ENST00000356800 C1QTNF8P60827 252 aa20.01■□□□□ 0.79
SMARCD3-202ENST00000356800 MAP2K1Q02750 393 aaPredicted RBP20.01■□□□□ 0.79
SMARCD3-202ENST00000356800 TPD52L1Q16890 204 aaPredicted RBP20.01■□□□□ 0.79
SMARCD3-202ENST00000356800 FOXR2Q6PJQ5 311 aa20.01■□□□□ 0.79
SMARCD3-202ENST00000356800 SRRTQ9BXP5 876 aaKnown RBP20.01■□□□□ 0.79
SMARCD3-202ENST00000356800 AP5M1Q9H0R1 490 aa20.01■□□□□ 0.79
SMARCD3-202ENST00000356800 ZMYM2Q9UBW7 1377 aa20.01■□□□□ 0.79
SMARCD3-202ENST00000356800 IGKV6-21A0A0C4DH24 114 aa20■□□□□ 0.79
SMARCD3-202ENST00000356800 K7ENM7 598 aa20■□□□□ 0.79
SMARCD3-202ENST00000356800 SEPT4O43236 478 aa20■□□□□ 0.79
SMARCD3-202ENST00000356800 KIF20AO95235 890 aa20■□□□□ 0.79
SMARCD3-202ENST00000356800 PRKAR2AP13861 404 aaKnown RBP20■□□□□ 0.79
SMARCD3-202ENST00000356800 INSRRP14616 1297 aa20■□□□□ 0.79
SMARCD3-202ENST00000356800 CCND3P30281 292 aaPredicted RBP20■□□□□ 0.79
SMARCD3-202ENST00000356800 ARL2P36404 184 aa20■□□□□ 0.79
SMARCD3-202ENST00000356800 NPTX2P47972 431 aa20■□□□□ 0.79
SMARCD3-202ENST00000356800 NCKAP1LP55160 1127 aa20■□□□□ 0.79
SMARCD3-202ENST00000356800 BEX3Q00994 111 aa20■□□□□ 0.79
SMARCD3-202ENST00000356800 LRRC63Q05C16 580 aa20■□□□□ 0.79
SMARCD3-202ENST00000356800 TBC1D8BQ0IIM8 1120 aa20■□□□□ 0.79
SMARCD3-202ENST00000356800 DRP2Q13474 957 aa20■□□□□ 0.79
SMARCD3-202ENST00000356800 KNOP1Q1ED39 458 aaKnown RBP20■□□□□ 0.79
SMARCD3-202ENST00000356800 CSGALNACT2Q8N6G5 542 aa20■□□□□ 0.79
SMARCD3-202ENST00000356800 KAT2BQ92831 832 aa20■□□□□ 0.79
SMARCD3-202ENST00000356800 EEF2KMTQ96G04 330 aa20■□□□□ 0.79
SMARCD3-202ENST00000356800 IKZF4Q9H2S9 585 aa20■□□□□ 0.79
SMARCD3-202ENST00000356800 C17orf75Q9HAS0 396 aa20■□□□□ 0.79
SMARCD3-202ENST00000356800 ZNF215Q9UL58 517 aaPredicted RBP20■□□□□ 0.79
SMARCD3-202ENST00000356800 MYADML2A6NDP7 307 aa20■□□□□ 0.79
SMARCD3-202ENST00000356800 SLC16A4O15374 487 aa20■□□□□ 0.79
SMARCD3-202ENST00000356800 HMGCRP04035 888 aa20■□□□□ 0.79
SMARCD3-202ENST00000356800 CNGA1P29973 690 aa20■□□□□ 0.79
SMARCD3-202ENST00000356800 MKRN4PQ13434 485 aaPredicted RBP20■□□□□ 0.79
SMARCD3-202ENST00000356800 MAP3K21Q5TCX8 1036 aa20■□□□□ 0.79
SMARCD3-202ENST00000356800 APTXQ7Z2E3 356 aaKnown RBP20■□□□□ 0.79
SMARCD3-202ENST00000356800 RAET1EQ8TD07 263 aa20■□□□□ 0.79
SMARCD3-202ENST00000356800 ASAP3Q8TDY4 903 aa20■□□□□ 0.79
SMARCD3-202ENST00000356800 SPIRE2Q8WWL2 714 aa20■□□□□ 0.79
SMARCD3-202ENST00000356800 ZBTB10Q96DT7 871 aa20■□□□□ 0.79
SMARCD3-202ENST00000356800 NTPCRQ9BSD7 190 aaKnown RBP20■□□□□ 0.79
SMARCD3-202ENST00000356800 KIFC3Q9BVG8 833 aa20■□□□□ 0.79
SMARCD3-202ENST00000356800 ST6GALNAC4Q9H4F1 302 aa20■□□□□ 0.79
SMARCD3-202ENST00000356800 IFNKQ9P0W0 207 aa20■□□□□ 0.79
SMARCD3-202ENST00000356800 UBE4BO95155 1302 aa20■□□□□ 0.79
SMARCD3-202ENST00000356800 CEP350Q5VT06 3117 aa19.99■□□□□ 0.79
SMARCD3-202ENST00000356800 ADGRA3Q8IWK6 1321 aa19.99■□□□□ 0.79
SMARCD3-202ENST00000356800 CBFA2T2O43439 604 aa19.99■□□□□ 0.79
SMARCD3-202ENST00000356800 F2P00734 622 aa19.99■□□□□ 0.79
SMARCD3-202ENST00000356800 SERPINC1P01008 464 aa19.99■□□□□ 0.79
SMARCD3-202ENST00000356800 CDK11BP21127 795 aaKnown RBP19.99■□□□□ 0.79
SMARCD3-202ENST00000356800 CPT1AP50416 773 aa19.99■□□□□ 0.79
SMARCD3-202ENST00000356800 DMP1Q13316 513 aaPredicted RBP19.99■□□□□ 0.79
SMARCD3-202ENST00000356800 FSCN1Q16658 493 aaKnown RBP19.99■□□□□ 0.79
SMARCD3-202ENST00000356800 ZNF484Q5JVG2 852 aa19.99■□□□□ 0.79
SMARCD3-202ENST00000356800 LRRC55Q6ZSA7 311 aa19.99■□□□□ 0.79
SMARCD3-202ENST00000356800 HAUS6Q7Z4H7 955 aa19.99■□□□□ 0.79
SMARCD3-202ENST00000356800 TMEM161BQ8NDZ6 487 aa19.99■□□□□ 0.79
SMARCD3-202ENST00000356800 PXYLP1Q8TE99 480 aa19.99■□□□□ 0.79
SMARCD3-202ENST00000356800 XPO4Q9C0E2 1151 aaKnown RBP19.99■□□□□ 0.79
SMARCD3-202ENST00000356800 UPF3AQ9H1J1 476 aaKnown RBP19.99■□□□□ 0.79
SMARCD3-202ENST00000356800 THAP9Q9H5L6 903 aa19.99■□□□□ 0.79
SMARCD3-202ENST00000356800 PCDHB13Q9Y5F0 798 aa19.99■□□□□ 0.79
SMARCD3-202ENST00000356800 SIP14410 1827 aa19.98■□□□□ 0.79
SMARCD3-202ENST00000356800 CCDC169A6NNP5 214 aa19.98■□□□□ 0.79
SMARCD3-202ENST00000356800 TGFB1I1O43294 461 aa19.98■□□□□ 0.79
SMARCD3-202ENST00000356800 C22orf31O95567 290 aa19.98■□□□□ 0.79
SMARCD3-202ENST00000356800 GLRA2P23416 452 aa19.98■□□□□ 0.79
SMARCD3-202ENST00000356800 UBASH3AP57075 661 aa19.98■□□□□ 0.79
SMARCD3-202ENST00000356800 GJA9P57773 515 aa19.98■□□□□ 0.79
SMARCD3-202ENST00000356800 GTF2BQ00403 316 aa19.98■□□□□ 0.79
SMARCD3-202ENST00000356800 STXBP4Q6ZWJ1 553 aa19.98■□□□□ 0.79
SMARCD3-202ENST00000356800 NOC3LQ8WTT2 800 aaKnown RBP19.98■□□□□ 0.79
SMARCD3-202ENST00000356800 TSG101Q99816 390 aa19.98■□□□□ 0.79
SMARCD3-202ENST00000356800 TRAF3IP3Q9Y228 551 aa19.98■□□□□ 0.79
SMARCD3-202ENST00000356800 COL1A2P08123 1366 aa19.98■□□□□ 0.79
SMARCD3-202ENST00000356800 LRRC10BA6NIK2 292 aa19.97■□□□□ 0.79
SMARCD3-202ENST00000356800 GOLGA6L6A8MZA4 724 aa19.97■□□□□ 0.79
SMARCD3-202ENST00000356800 IGBP1P78318 339 aa19.97■□□□□ 0.79
SMARCD3-202ENST00000356800 SPAG1Q07617 926 aa19.97■□□□□ 0.79
SMARCD3-202ENST00000356800 ZC3H3Q8IXZ2 948 aaKnown RBP19.97■□□□□ 0.79
SMARCD3-202ENST00000356800 LRRC71Q8N4P6 559 aa19.97■□□□□ 0.79
SMARCD3-202ENST00000356800 NAP1L5Q96NT1 182 aaPredicted RBP19.97■□□□□ 0.79
SMARCD3-202ENST00000356800 KMT5AQ9NQR1 393 aa19.97■□□□□ 0.79
SMARCD3-202ENST00000356800 WBP1LQ9NX94 342 aa19.97■□□□□ 0.79
SMARCD3-202ENST00000356800 KCNJ18B7U540 433 aa19.97■□□□□ 0.79
SMARCD3-202ENST00000356800 PDXKO00764 312 aa19.97■□□□□ 0.79
SMARCD3-202ENST00000356800 PTMAP06454 111 aaKnown RBP19.97■□□□□ 0.79
SMARCD3-202ENST00000356800 MYL3P08590 195 aa19.97■□□□□ 0.79
SMARCD3-202ENST00000356800 C6orf222P0C671 652 aaPredicted RBP19.97■□□□□ 0.79
SMARCD3-202ENST00000356800 SMTNP53814 917 aa19.97■□□□□ 0.79
SMARCD3-202ENST00000356800 NKX3-2P78367 333 aa19.97■□□□□ 0.79
SMARCD3-202ENST00000356800 ALCAMQ13740 583 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms