RNA–Protein interactions for RNA: ENST00000356183.8

GTF3C1-201, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-201ENST00000356183 ZNF555Q8NEP9 628 aa11.77□□□□□ -0.53
GTF3C1-201ENST00000356183 FOXP1Q9H334 677 aaPredicted RBP11.77□□□□□ -0.53
GTF3C1-201ENST00000356183 UBN2Q6ZU65 1347 aa11.77□□□□□ -0.53
GTF3C1-201ENST00000356183 NCKAP5LQ9HCH0 1330 aa11.77□□□□□ -0.53
GTF3C1-201ENST00000356183 SAMD9Q5K651 1589 aa11.77□□□□□ -0.53
GTF3C1-201ENST00000356183 GUCY1A3Q02108 690 aa11.77□□□□□ -0.53
GTF3C1-201ENST00000356183 CCDC142Q17RM4 750 aa11.77□□□□□ -0.53
GTF3C1-201ENST00000356183 KRT26Q7Z3Y9 468 aa11.77□□□□□ -0.53
GTF3C1-201ENST00000356183 PATL1Q86TB9 770 aaKnown RBP11.77□□□□□ -0.53
GTF3C1-201ENST00000356183 DDIASQ8IXT1 998 aa11.77□□□□□ -0.53
GTF3C1-201ENST00000356183 ASPSCR1Q9BZE9 553 aa11.77□□□□□ -0.53
GTF3C1-201ENST00000356183 EFCAB14O75071 495 aa11.76□□□□□ -0.53
GTF3C1-201ENST00000356183 KRT37O76014 449 aa11.76□□□□□ -0.53
GTF3C1-201ENST00000356183 CDC25AP30304 524 aa11.76□□□□□ -0.53
GTF3C1-201ENST00000356183 LARGE1O95461 756 aa11.76□□□□□ -0.53
GTF3C1-201ENST00000356183 ATP1A3P13637 1013 aa11.76□□□□□ -0.53
GTF3C1-201ENST00000356183 BCAMP50895 628 aa11.76□□□□□ -0.53
GTF3C1-201ENST00000356183 CTSWP56202 376 aa11.76□□□□□ -0.53
GTF3C1-201ENST00000356183 PARP10Q53GL7 1025 aa11.76□□□□□ -0.53
GTF3C1-201ENST00000356183 PBRM1Q86U86 1689 aa11.76□□□□□ -0.53
GTF3C1-201ENST00000356183 UBTFL6P0CB48 400 aaPredicted RBP11.76□□□□□ -0.53
GTF3C1-201ENST00000356183 PGM1P36871 562 aa11.76□□□□□ -0.53
GTF3C1-201ENST00000356183 ZBED6P86452 979 aa11.76□□□□□ -0.53
GTF3C1-201ENST00000356183 ZNF710Q8N1W2 664 aa11.76□□□□□ -0.53
GTF3C1-201ENST00000356183 LARGE2Q8N3Y3 721 aa11.76□□□□□ -0.53
GTF3C1-201ENST00000356183 CUEDC2Q9H467 287 aa11.76□□□□□ -0.53
GTF3C1-201ENST00000356183 TBC1D23Q9NUY8 699 aa11.76□□□□□ -0.53
GTF3C1-201ENST00000356183 PRDM4Q9UKN5 801 aa11.76□□□□□ -0.53
GTF3C1-201ENST00000356183 MAGI2Q86UL8 1455 aa11.76□□□□□ -0.53
GTF3C1-201ENST00000356183 MFAP3LO75121 409 aa11.76□□□□□ -0.53
GTF3C1-201ENST00000356183 KRT17Q04695 432 aa11.76□□□□□ -0.53
GTF3C1-201ENST00000356183 APOA5Q6Q788 366 aa11.76□□□□□ -0.53
GTF3C1-201ENST00000356183 TEX2Q8IWB9 1127 aa11.76□□□□□ -0.53
GTF3C1-201ENST00000356183 TRIM8Q9BZR9 551 aa11.76□□□□□ -0.53
GTF3C1-201ENST00000356183 MIS18BP1Q6P0N0 1132 aa11.76□□□□□ -0.53
GTF3C1-201ENST00000356183 SIX6OS1Q8N1H7 587 aa11.76□□□□□ -0.53
GTF3C1-201ENST00000356183 BTN2A2Q8WVV5 523 aa11.76□□□□□ -0.53
GTF3C1-201ENST00000356183 LRRC4Q9HBW1 653 aa11.76□□□□□ -0.53
GTF3C1-201ENST00000356183 S100A5P33763 92 aa11.76□□□□□ -0.53
GTF3C1-201ENST00000356183 GYG1P46976 350 aa11.76□□□□□ -0.53
GTF3C1-201ENST00000356183 MXD4Q14582 209 aaPredicted RBP11.76□□□□□ -0.53
GTF3C1-201ENST00000356183 NFRKBQ6P4R8 1299 aa11.76□□□□□ -0.53
GTF3C1-201ENST00000356183 PKD2L2Q9NZM6 624 aa11.76□□□□□ -0.53
GTF3C1-201ENST00000356183 HDAC6Q9UBN7 1215 aa11.76□□□□□ -0.53
GTF3C1-201ENST00000356183 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.76□□□□□ -0.53
GTF3C1-201ENST00000356183 HEY1Q9Y5J3 304 aa11.76□□□□□ -0.53
GTF3C1-201ENST00000356183 MAST1Q9Y2H9 1570 aa11.75□□□□□ -0.53
GTF3C1-201ENST00000356183 LAD1O00515 517 aa11.75□□□□□ -0.53
GTF3C1-201ENST00000356183 IL10P22301 178 aa11.75□□□□□ -0.53
GTF3C1-201ENST00000356183 AP1B1Q10567 949 aa11.75□□□□□ -0.53
GTF3C1-201ENST00000356183 SLC30A9Q6PML9 568 aa11.75□□□□□ -0.53
GTF3C1-201ENST00000356183 AS3MTQ9HBK9 375 aa11.75□□□□□ -0.53
GTF3C1-201ENST00000356183 PSD3Q9NYI0 1048 aa11.75□□□□□ -0.53
GTF3C1-201ENST00000356183 PRAMEP78395 509 aa11.75□□□□□ -0.53
GTF3C1-201ENST00000356183 KDSRQ06136 332 aa11.75□□□□□ -0.53
GTF3C1-201ENST00000356183 ZNF211Q13398 564 aaPredicted RBP11.75□□□□□ -0.53
GTF3C1-201ENST00000356183 HIC1Q14526 733 aa11.75□□□□□ -0.53
GTF3C1-201ENST00000356183 TTLL7Q6ZT98 887 aa11.75□□□□□ -0.53
GTF3C1-201ENST00000356183 IFT43Q96FT9 208 aa11.75□□□□□ -0.53
GTF3C1-201ENST00000356183 ATXN7L3BQ96GX2 97 aa11.75□□□□□ -0.53
GTF3C1-201ENST00000356183 FSD1LQ9BXM9 530 aa11.75□□□□□ -0.53
GTF3C1-201ENST00000356183 CASS4Q9NQ75 786 aa11.75□□□□□ -0.53
GTF3C1-201ENST00000356183 HPS4Q9NQG7 708 aa11.75□□□□□ -0.53
GTF3C1-201ENST00000356183 LMCD1Q9NZU5 365 aa11.75□□□□□ -0.53
GTF3C1-201ENST00000356183 DIS3Q9Y2L1 958 aaKnown RBP11.75□□□□□ -0.53
GTF3C1-201ENST00000356183 TCP11X1B4DZS4 312 aa11.75□□□□□ -0.53
GTF3C1-201ENST00000356183 TSC22D2O75157 780 aa11.75□□□□□ -0.53
GTF3C1-201ENST00000356183 SOX11P35716 441 aa11.75□□□□□ -0.53
GTF3C1-201ENST00000356183 PAPOLAP51003 745 aaKnown RBP11.75□□□□□ -0.53
GTF3C1-201ENST00000356183 RPS6P62753 249 aaKnown RBP11.75□□□□□ -0.53
GTF3C1-201ENST00000356183 TEKT4Q8WW24 435 aa11.75□□□□□ -0.53
GTF3C1-201ENST00000356183 BPIFA3Q9BQP9 254 aa11.75□□□□□ -0.53
GTF3C1-201ENST00000356183 SYTL2Q9HCH5 934 aa11.75□□□□□ -0.53
GTF3C1-201ENST00000356183 GEMIN8Q9NWZ8 242 aaKnown RBP11.75□□□□□ -0.53
GTF3C1-201ENST00000356183 AFF4Q9UHB7 1163 aaKnown RBP11.75□□□□□ -0.53
GTF3C1-201ENST00000356183 ESYT3A0FGR9 886 aa11.75□□□□□ -0.53
GTF3C1-201ENST00000356183 ZNF233A6NK53 670 aa11.75□□□□□ -0.53
GTF3C1-201ENST00000356183 ZNF263O14978 683 aa11.75□□□□□ -0.53
GTF3C1-201ENST00000356183 LZTS3O60299 673 aaPredicted RBP11.75□□□□□ -0.53
GTF3C1-201ENST00000356183 ANGPT1Q15389 498 aa11.75□□□□□ -0.53
GTF3C1-201ENST00000356183 GALNT4Q8N4A0 578 aa11.75□□□□□ -0.53
GTF3C1-201ENST00000356183 GFM2Q969S9 779 aaKnown RBP11.75□□□□□ -0.53
GTF3C1-201ENST00000356183 MOSPD1Q9UJG1 213 aa11.75□□□□□ -0.53
GTF3C1-201ENST00000356183 ANAPC7Q9UJX3 599 aa11.75□□□□□ -0.53
GTF3C1-201ENST00000356183 POTEB3A0JP26 581 aa11.75□□□□□ -0.53
GTF3C1-201ENST00000356183 CYP2E1P05181 493 aaPredicted RBP11.75□□□□□ -0.53
GTF3C1-201ENST00000356183 SSTR3P32745 418 aaPredicted RBP11.75□□□□□ -0.53
GTF3C1-201ENST00000356183 DLGAP5Q15398 846 aa11.75□□□□□ -0.53
GTF3C1-201ENST00000356183 KLHL38Q2WGJ6 581 aa11.75□□□□□ -0.53
GTF3C1-201ENST00000356183 AARS2Q5JTZ9 985 aaKnown RBP11.75□□□□□ -0.53
GTF3C1-201ENST00000356183 LVRNQ6Q4G3 990 aa11.75□□□□□ -0.53
GTF3C1-201ENST00000356183 POTEBQ6S5H4 581 aa11.75□□□□□ -0.53
GTF3C1-201ENST00000356183 ARHGEF25Q86VW2 580 aa11.75□□□□□ -0.53
GTF3C1-201ENST00000356183 STX19Q8N4C7 294 aa11.75□□□□□ -0.53
GTF3C1-201ENST00000356183 PPM1NQ8N819 430 aa11.75□□□□□ -0.53
GTF3C1-201ENST00000356183 C6orf203Q9P0P8 240 aaPredicted RBP11.75□□□□□ -0.53
GTF3C1-201ENST00000356183 INO80B-WBP1J3KQ70 363 aa11.74□□□□□ -0.53
GTF3C1-201ENST00000356183 PLCG1P19174 1290 aa11.74□□□□□ -0.53
GTF3C1-201ENST00000356183 BTKQ06187 659 aa11.74□□□□□ -0.53
GTF3C1-201ENST00000356183 SIRT2Q8IXJ6 389 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms