RNA–Protein interactions for RNA: ENST00000356141.8

NPAS3-202, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-202ENST00000356141 COPS5Q92905 334 aa19.29■□□□□ 0.68
NPAS3-202ENST00000356141 PPP1R16BQ96T49 567 aa19.29■□□□□ 0.68
NPAS3-202ENST00000356141 PACSIN1Q9BY11 444 aa19.29■□□□□ 0.68
NPAS3-202ENST00000356141 IFIH1Q9BYX4 1025 aaKnown RBP19.29■□□□□ 0.68
NPAS3-202ENST00000356141 OLFML3Q9NRN5 406 aa19.29■□□□□ 0.68
NPAS3-202ENST00000356141 KIAA1217Q5T5P2 1943 aa19.29■□□□□ 0.68
NPAS3-202ENST00000356141 RLFQ13129 1914 aa19.29■□□□□ 0.68
NPAS3-202ENST00000356141 GAP43P17677 238 aa19.29■□□□□ 0.68
NPAS3-202ENST00000356141 CXCR5P32302 372 aa19.29■□□□□ 0.68
NPAS3-202ENST00000356141 CYLC1P35663 651 aaPredicted RBP19.29■□□□□ 0.68
NPAS3-202ENST00000356141 PRKCEQ02156 737 aa19.29■□□□□ 0.68
NPAS3-202ENST00000356141 LMBRD2Q68DH5 695 aaPredicted RBP19.29■□□□□ 0.68
NPAS3-202ENST00000356141 LBX2Q6XYB7 198 aa19.29■□□□□ 0.68
NPAS3-202ENST00000356141 SLC35C1Q96A29 364 aa19.29■□□□□ 0.68
NPAS3-202ENST00000356141 GOLPH3Q9H4A6 298 aa19.29■□□□□ 0.68
NPAS3-202ENST00000356141 SMARCAL1Q9NZC9 954 aa19.29■□□□□ 0.68
NPAS3-202ENST00000356141 CGNQ9P2M7 1197 aaKnown RBP19.29■□□□□ 0.68
NPAS3-202ENST00000356141 ADAMTS5Q9UNA0 930 aa19.29■□□□□ 0.68
NPAS3-202ENST00000356141 SOWAHBA6NEL2 793 aa19.29■□□□□ 0.68
NPAS3-202ENST00000356141 ZNF185O15231 689 aa19.29■□□□□ 0.68
NPAS3-202ENST00000356141 ATP1A1P05023 1023 aaKnown RBP19.29■□□□□ 0.68
NPAS3-202ENST00000356141 HARSP12081 509 aaKnown RBP19.29■□□□□ 0.68
NPAS3-202ENST00000356141 NF2P35240 595 aa19.29■□□□□ 0.68
NPAS3-202ENST00000356141 SPA17Q15506 151 aa19.29■□□□□ 0.68
NPAS3-202ENST00000356141 EDRF1Q3B7T1 1238 aa19.29■□□□□ 0.68
NPAS3-202ENST00000356141 INPP4AQ96PE3 977 aaPredicted RBP19.29■□□□□ 0.68
NPAS3-202ENST00000356141 EFCC1Q9HA90 598 aa19.29■□□□□ 0.68
NPAS3-202ENST00000356141 LARSQ9P2J5 1176 aaKnown RBP19.29■□□□□ 0.68
NPAS3-202ENST00000356141 SALL4Q9UJQ4 1053 aa19.29■□□□□ 0.68
NPAS3-202ENST00000356141 RBBP6Q7Z6E9 1792 aaKnown RBP19.28■□□□□ 0.68
NPAS3-202ENST00000356141 ANKRD63C9JTQ0 380 aa19.28■□□□□ 0.68
NPAS3-202ENST00000356141 PON1P27169 355 aa19.28■□□□□ 0.68
NPAS3-202ENST00000356141 GCLMP48507 274 aa19.28■□□□□ 0.68
NPAS3-202ENST00000356141 SEZ6Q53EL9 994 aa19.28■□□□□ 0.68
NPAS3-202ENST00000356141 GTPBP4Q9BZE4 634 aaKnown RBP19.28■□□□□ 0.68
NPAS3-202ENST00000356141 PLAGL2Q9UPG8 496 aa19.28■□□□□ 0.68
NPAS3-202ENST00000356141 NCK2O43639 380 aa19.28■□□□□ 0.68
NPAS3-202ENST00000356141 MEA1Q16626 185 aa19.28■□□□□ 0.68
NPAS3-202ENST00000356141 SFMBT2Q5VUG0 894 aa19.28■□□□□ 0.68
NPAS3-202ENST00000356141 FBXO16Q8IX29 292 aaPredicted RBP19.28■□□□□ 0.68
NPAS3-202ENST00000356141 ANKRD13AQ8IZ07 590 aa19.28■□□□□ 0.68
NPAS3-202ENST00000356141 PORCNQ9H237 461 aa19.28■□□□□ 0.68
NPAS3-202ENST00000356141 PLEKHA4Q9H4M7 779 aa19.28■□□□□ 0.68
NPAS3-202ENST00000356141 PPP2R3BQ9Y5P8 575 aa19.28■□□□□ 0.68
NPAS3-202ENST00000356141 RPL13P26373 211 aaKnown RBP19.27■□□□□ 0.68
NPAS3-202ENST00000356141 STXBP2Q15833 593 aa19.27■□□□□ 0.68
NPAS3-202ENST00000356141 NOL9Q5SY16 702 aaKnown RBP19.27■□□□□ 0.68
NPAS3-202ENST00000356141 L2HGDHQ9H9P8 463 aa19.27■□□□□ 0.68
NPAS3-202ENST00000356141 PRDM16Q9HAZ2 1276 aa19.27■□□□□ 0.68
NPAS3-202ENST00000356141 TOPORSQ9NS56 1045 aaPredicted RBP19.27■□□□□ 0.68
NPAS3-202ENST00000356141 GINM1Q9NU53 330 aa19.27■□□□□ 0.68
NPAS3-202ENST00000356141 FRMD4BQ9Y2L6 1034 aa19.27■□□□□ 0.68
NPAS3-202ENST00000356141 STK24Q9Y6E0 443 aa19.27■□□□□ 0.68
NPAS3-202ENST00000356141 CAPN6Q9Y6Q1 641 aa19.27■□□□□ 0.68
NPAS3-202ENST00000356141 ADGRA3Q8IWK6 1321 aa19.27■□□□□ 0.68
NPAS3-202ENST00000356141 DENND3A2RUS2 1198 aa19.27■□□□□ 0.67
NPAS3-202ENST00000356141 CTAGE9A4FU28 777 aa19.27■□□□□ 0.67
NPAS3-202ENST00000356141 GOLGA6L9A6NEM1 432 aa19.27■□□□□ 0.67
NPAS3-202ENST00000356141 GFPT2O94808 682 aa19.27■□□□□ 0.67
NPAS3-202ENST00000356141 ALDH5A1P51649 535 aaPredicted RBP19.27■□□□□ 0.67
NPAS3-202ENST00000356141 KRT76Q01546 638 aa19.27■□□□□ 0.67
NPAS3-202ENST00000356141 FBXO38Q6PIJ6 1188 aa19.27■□□□□ 0.67
NPAS3-202ENST00000356141 RBM46Q8TBY0 533 aaKnown RBP19.27■□□□□ 0.67
NPAS3-202ENST00000356141 HAUS4Q9H6D7 363 aa19.27■□□□□ 0.67
NPAS3-202ENST00000356141 SEPT11Q9NVA2 429 aaKnown RBP19.27■□□□□ 0.67
NPAS3-202ENST00000356141 EHD2Q9NZN4 543 aa19.27■□□□□ 0.67
NPAS3-202ENST00000356141 PCDHA13Q9Y5I0 950 aa19.27■□□□□ 0.67
NPAS3-202ENST00000356141 FECHP22830 423 aa19.26■□□□□ 0.67
NPAS3-202ENST00000356141 KLHL30Q0D2K2 578 aa19.26■□□□□ 0.67
NPAS3-202ENST00000356141 ERO1AQ96HE7 468 aa19.26■□□□□ 0.67
NPAS3-202ENST00000356141 ACP6Q9NPH0 428 aa19.26■□□□□ 0.67
NPAS3-202ENST00000356141 MRFAP1Q9Y605 127 aa19.26■□□□□ 0.67
NPAS3-202ENST00000356141 ARIH2O95376 493 aa19.26■□□□□ 0.67
NPAS3-202ENST00000356141 CALCAP01258 141 aa19.26■□□□□ 0.67
NPAS3-202ENST00000356141 UCHL3P15374 230 aa19.26■□□□□ 0.67
NPAS3-202ENST00000356141 GUCY2CP25092 1073 aa19.26■□□□□ 0.67
NPAS3-202ENST00000356141 PSMC2P35998 433 aaKnown RBP19.26■□□□□ 0.67
NPAS3-202ENST00000356141 USP8P40818 1118 aa19.26■□□□□ 0.67
NPAS3-202ENST00000356141 NPTX2P47972 431 aa19.26■□□□□ 0.67
NPAS3-202ENST00000356141 ZNF131P52739 623 aa19.26■□□□□ 0.67
NPAS3-202ENST00000356141 ERO1BQ86YB8 467 aa19.26■□□□□ 0.67
NPAS3-202ENST00000356141 CBWD2Q8IUF1 395 aa19.26■□□□□ 0.67
NPAS3-202ENST00000356141 UBXN4Q92575 508 aa19.26■□□□□ 0.67
NPAS3-202ENST00000356141 BICD1Q96G01 975 aa19.26■□□□□ 0.67
NPAS3-202ENST00000356141 PDGFCQ9NRA1 345 aa19.26■□□□□ 0.67
NPAS3-202ENST00000356141 PACSIN2Q9UNF0 486 aaPredicted RBP19.26■□□□□ 0.67
NPAS3-202ENST00000356141 GNA14O95837 355 aa19.25■□□□□ 0.67
NPAS3-202ENST00000356141 RHOXF2BP0C7M4 288 aa19.25■□□□□ 0.67
NPAS3-202ENST00000356141 PLS3P13797 630 aa19.25■□□□□ 0.67
NPAS3-202ENST00000356141 RNASE9P60153 205 aaKnown RBP19.25■□□□□ 0.67
NPAS3-202ENST00000356141 DRP2Q13474 957 aa19.25■□□□□ 0.67
NPAS3-202ENST00000356141 HGSNATQ68CP4 663 aa19.25■□□□□ 0.67
NPAS3-202ENST00000356141 RETREG2Q8NC44 543 aa19.25■□□□□ 0.67
NPAS3-202ENST00000356141 RHOXF2Q9BQY4 288 aa19.25■□□□□ 0.67
NPAS3-202ENST00000356141 TAF1DQ9H5J8 278 aaPredicted RBP19.25■□□□□ 0.67
NPAS3-202ENST00000356141 RBPJLQ9UBG7 517 aa19.25■□□□□ 0.67
NPAS3-202ENST00000356141 ODF2LQ9ULJ1 636 aa19.25■□□□□ 0.67
NPAS3-202ENST00000356141 A0A087X0T9 212 aa19.25■□□□□ 0.67
NPAS3-202ENST00000356141 FAM228BP0C875 321 aa19.25■□□□□ 0.67
NPAS3-202ENST00000356141 UBA1P22314 1058 aaKnown RBP19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms