RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 FMO2Q99518 471 aa15.17■□□□□ 0.02
SREBF1-202ENST00000355815 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.17■□□□□ 0.02
SREBF1-202ENST00000355815 RGPD1P0DJD0 1748 aa15.17■□□□□ 0.02
SREBF1-202ENST00000355815 ECE1P42892 770 aa15.17■□□□□ 0.02
SREBF1-202ENST00000355815 HERVK_113P62684 666 aa15.17■□□□□ 0.02
SREBF1-202ENST00000355815 BARGINQ6ZT62 677 aa15.17■□□□□ 0.02
SREBF1-202ENST00000355815 LONP2Q86WA8 852 aa15.17■□□□□ 0.02
SREBF1-202ENST00000355815 DMGDHQ9UI17 866 aaKnown RBP15.17■□□□□ 0.02
SREBF1-202ENST00000355815 DCCP43146 1447 aa15.17■□□□□ 0.02
SREBF1-202ENST00000355815 LRRIQ3A6PVS8 624 aaPredicted RBP15.16■□□□□ 0.02
SREBF1-202ENST00000355815 PGRMC1O00264 195 aaKnown RBP15.16■□□□□ 0.02
SREBF1-202ENST00000355815 EIF3HO15372 352 aaKnown RBP eCLIP15.16■□□□□ 0.022e-6■□□□□ 9.4
SREBF1-202ENST00000355815 FERP16591 822 aa15.16■□□□□ 0.02
SREBF1-202ENST00000355815 SERPINB6P35237 376 aa15.16■□□□□ 0.02
SREBF1-202ENST00000355815 SMTNP53814 917 aa15.16■□□□□ 0.02
SREBF1-202ENST00000355815 DBN1Q16643 649 aa15.16■□□□□ 0.02
SREBF1-202ENST00000355815 LRRC8CQ8TDW0 803 aa15.16■□□□□ 0.02
SREBF1-202ENST00000355815 ZBTB10Q96DT7 871 aa15.16■□□□□ 0.02
SREBF1-202ENST00000355815 PARVGQ9HBI0 331 aa15.16■□□□□ 0.02
SREBF1-202ENST00000355815 GEMIN8Q9NWZ8 242 aaKnown RBP15.16■□□□□ 0.02
SREBF1-202ENST00000355815 AGTPBP1Q9UPW5 1226 aa15.16■□□□□ 0.02
SREBF1-202ENST00000355815 SLIT3O75094 1523 aa15.16■□□□□ 0.02
SREBF1-202ENST00000355815 EPHB6O15197 1021 aa15.16■□□□□ 0.02
SREBF1-202ENST00000355815 KIF1CO43896 1103 aaKnown RBP15.16■□□□□ 0.02
SREBF1-202ENST00000355815 TPD52P55327 224 aaPredicted RBP15.16■□□□□ 0.02
SREBF1-202ENST00000355815 TMEM179Q6ZVK1 233 aa15.16■□□□□ 0.02
SREBF1-202ENST00000355815 REEP2Q9BRK0 252 aa15.16■□□□□ 0.02
SREBF1-202ENST00000355815 DNAJC5Q9H3Z4 198 aa15.16■□□□□ 0.02
SREBF1-202ENST00000355815 STK32BQ9NY57 414 aa15.16■□□□□ 0.02
SREBF1-202ENST00000355815 MRPL11Q9Y3B7 192 aaKnown RBP15.16■□□□□ 0.02
SREBF1-202ENST00000355815 ABCB11O95342 1321 aa15.16■□□□□ 0.02
SREBF1-202ENST00000355815 NOL3O60936 208 aaKnown RBP15.16■□□□□ 0.02
SREBF1-202ENST00000355815 TRPA1O75762 1119 aa15.16■□□□□ 0.02
SREBF1-202ENST00000355815 KLRC1P26715 233 aa15.16■□□□□ 0.02
SREBF1-202ENST00000355815 SSTR3P32745 418 aaPredicted RBP15.16■□□□□ 0.02
SREBF1-202ENST00000355815 PSMC2P35998 433 aaKnown RBP15.16■□□□□ 0.02
SREBF1-202ENST00000355815 PRAMEF18Q5VWM3 479 aa15.16■□□□□ 0.02
SREBF1-202ENST00000355815 TMEM139Q8IV31 216 aa15.16■□□□□ 0.02
SREBF1-202ENST00000355815 MASTLQ96GX5 879 aa15.16■□□□□ 0.02
SREBF1-202ENST00000355815 CALR3Q96L12 384 aaKnown RBP15.16■□□□□ 0.02
SREBF1-202ENST00000355815 TEKT3Q9BXF9 490 aa15.16■□□□□ 0.02
SREBF1-202ENST00000355815 ZNF341Q9BYN7 854 aa15.16■□□□□ 0.02
SREBF1-202ENST00000355815 ADAM33Q9BZ11 813 aa15.16■□□□□ 0.02
SREBF1-202ENST00000355815 LRRC4BQ9NT99 713 aa15.16■□□□□ 0.02
SREBF1-202ENST00000355815 PPP1R9AQ9ULJ8 1098 aa15.16■□□□□ 0.02
SREBF1-202ENST00000355815 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.16■□□□□ 0.02
SREBF1-202ENST00000355815 COMMD10Q9Y6G5 202 aa15.16■□□□□ 0.02
SREBF1-202ENST00000355815 CNTNAP4Q9C0A0 1308 aa15.16■□□□□ 0.02
SREBF1-202ENST00000355815 FAM237AA0A1B0GTK4 181 aa15.15■□□□□ 0.02
SREBF1-202ENST00000355815 RASGRF2O14827 1237 aa15.15■□□□□ 0.02
SREBF1-202ENST00000355815 CCDC93Q567U6 631 aa15.15■□□□□ 0.02
SREBF1-202ENST00000355815 NIM1KQ8IY84 436 aa15.15■□□□□ 0.02
SREBF1-202ENST00000355815 PACSIN1Q9BY11 444 aa15.15■□□□□ 0.02
SREBF1-202ENST00000355815 ARHGAP20Q9P2F6 1191 aa15.15■□□□□ 0.02
SREBF1-202ENST00000355815 ZBTB39O15060 712 aa15.15■□□□□ 0.02
SREBF1-202ENST00000355815 BCRP11274 1271 aa15.15■□□□□ 0.02
SREBF1-202ENST00000355815 PEX3P56589 373 aa15.15■□□□□ 0.02
SREBF1-202ENST00000355815 KNOP1Q1ED39 458 aaKnown RBP15.15■□□□□ 0.02
SREBF1-202ENST00000355815 ARHGEF16Q5VV41 709 aa15.15■□□□□ 0.02
SREBF1-202ENST00000355815 DDX42Q86XP3 938 aaKnown RBP eCLIP15.15■□□□□ 0.02
SREBF1-202ENST00000355815 SP8Q8IXZ3 490 aa15.15■□□□□ 0.02
SREBF1-202ENST00000355815 KIF2BQ8N4N8 673 aa15.15■□□□□ 0.02
SREBF1-202ENST00000355815 ZNF473Q8WTR7 871 aaKnown RBP15.15■□□□□ 0.02
SREBF1-202ENST00000355815 ELMO3Q96BJ8 720 aa15.15■□□□□ 0.02
SREBF1-202ENST00000355815 ZNF668Q96K58 619 aaPredicted RBP15.15■□□□□ 0.02
SREBF1-202ENST00000355815 HPCAL4Q9UM19 191 aa15.15■□□□□ 0.02
SREBF1-202ENST00000355815 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.15■□□□□ 0.02
SREBF1-202ENST00000355815 RCCD1A6NED2 376 aa15.15■□□□□ 0.02
SREBF1-202ENST00000355815 KIF22Q14807 665 aa15.15■□□□□ 0.02
SREBF1-202ENST00000355815 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.15■□□□□ 0.02
SREBF1-202ENST00000355815 BSPRYQ5W0U4 402 aa15.15■□□□□ 0.02
SREBF1-202ENST00000355815 CROCCP2Q86T23 111 aa15.15■□□□□ 0.02
SREBF1-202ENST00000355815 ACER1Q8TDN7 264 aa15.15■□□□□ 0.02
SREBF1-202ENST00000355815 HDAC7Q8WUI4 952 aa15.15■□□□□ 0.02
SREBF1-202ENST00000355815 TSNARE1Q96NA8 513 aa15.15■□□□□ 0.02
SREBF1-202ENST00000355815 EIF2AK1Q9BQI3 630 aaKnown RBP15.15■□□□□ 0.02
SREBF1-202ENST00000355815 METTL14Q9HCE5 456 aaKnown RBP15.15■□□□□ 0.02
SREBF1-202ENST00000355815 RAVER2Q9HCJ3 691 aaKnown RBP15.15■□□□□ 0.02
SREBF1-202ENST00000355815 DNAJC12Q9UKB3 198 aa15.15■□□□□ 0.02
SREBF1-202ENST00000355815 MRC1P22897 1456 aa15.15■□□□□ 0.02
SREBF1-202ENST00000355815 A0A087X0T9 212 aa15.14■□□□□ 0.02
SREBF1-202ENST00000355815 MED24O75448 989 aa15.14■□□□□ 0.02
SREBF1-202ENST00000355815 FAM228BP0C875 321 aa15.14■□□□□ 0.02
SREBF1-202ENST00000355815 NLRX1Q86UT6 975 aa15.14■□□□□ 0.02
SREBF1-202ENST00000355815 ANKZF1Q9H8Y5 726 aa15.14■□□□□ 0.02
SREBF1-202ENST00000355815 ETNK1Q9HBU6 452 aa15.14■□□□□ 0.02
SREBF1-202ENST00000355815 RBM12Q9NTZ6 932 aaKnown RBP15.14■□□□□ 0.02
SREBF1-202ENST00000355815 SNX12Q9UMY4 172 aa15.14■□□□□ 0.02
SREBF1-202ENST00000355815 PDS5AQ29RF7 1337 aaKnown RBP15.14■□□□□ 0.01
SREBF1-202ENST00000355815 CASP4P49662 377 aa15.14■□□□□ 0.01
SREBF1-202ENST00000355815 MYL7Q01449 175 aa15.14■□□□□ 0.01
SREBF1-202ENST00000355815 KAZNQ674X7 775 aa15.14■□□□□ 0.01
SREBF1-202ENST00000355815 PDXDC1Q6P996 788 aa15.14■□□□□ 0.01
SREBF1-202ENST00000355815 PODNQ7Z5L7 613 aa15.14■□□□□ 0.01
SREBF1-202ENST00000355815 NEK9Q8TD19 979 aa15.14■□□□□ 0.01
SREBF1-202ENST00000355815 SH2D4AQ9H788 454 aa15.14■□□□□ 0.01
SREBF1-202ENST00000355815 KCNG1Q9UIX4 513 aa15.14■□□□□ 0.01
SREBF1-202ENST00000355815 ITIH6Q6UXX5 1313 aa15.14■□□□□ 0.01
SREBF1-202ENST00000355815 LSP1P33241 339 aa15.14■□□□□ 0.01
SREBF1-202ENST00000355815 TMED2Q15363 201 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 145.7 ms