RNA–Protein interactions for RNA: ENST00000355765.10

PRPF39-201, Transcript of pre-mRNA processing factor 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF39, Length 2,868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-201ENST00000355765 TMEM47Q9BQJ4 181 aa20.43■□□□□ 0.86
PRPF39-201ENST00000355765 KCNK9Q9NPC2 374 aa20.43■□□□□ 0.86
PRPF39-201ENST00000355765 GRHL1Q9NZI5 618 aa20.43■□□□□ 0.86
PRPF39-201ENST00000355765 RREB1Q92766 1687 aa20.43■□□□□ 0.86
PRPF39-201ENST00000355765 TMEM120BA0PK00 339 aa20.43■□□□□ 0.86
PRPF39-201ENST00000355765 LUC7L3O95232 432 aaKnown RBP20.43■□□□□ 0.86
PRPF39-201ENST00000355765 GNA14O95837 355 aa20.43■□□□□ 0.86
PRPF39-201ENST00000355765 GNAT1P11488 350 aa20.43■□□□□ 0.86
PRPF39-201ENST00000355765 PLCG2P16885 1265 aa20.43■□□□□ 0.86
PRPF39-201ENST00000355765 NR2F2P24468 414 aa20.43■□□□□ 0.86
PRPF39-201ENST00000355765 PON1P27169 355 aa20.43■□□□□ 0.86
PRPF39-201ENST00000355765 RAB27AP51159 221 aa20.43■□□□□ 0.86
PRPF39-201ENST00000355765 EXOC3L4Q17RC7 722 aa20.43■□□□□ 0.86
PRPF39-201ENST00000355765 DPY19L2P1Q6NXN4 242 aa20.43■□□□□ 0.86
PRPF39-201ENST00000355765 USP17L2Q6R6M4 530 aa20.43■□□□□ 0.86
PRPF39-201ENST00000355765 FAM43BQ6ZT52 329 aaPredicted RBP20.43■□□□□ 0.86
PRPF39-201ENST00000355765 SLC35G2Q8TBE7 412 aa20.43■□□□□ 0.86
PRPF39-201ENST00000355765 ETNK1Q9HBU6 452 aa20.43■□□□□ 0.86
PRPF39-201ENST00000355765 NUP98P52948 1817 aa20.42■□□□□ 0.86
PRPF39-201ENST00000355765 E9PMD0 336 aa20.42■□□□□ 0.86
PRPF39-201ENST00000355765 LIN7AO14910 233 aaPredicted RBP20.42■□□□□ 0.86
PRPF39-201ENST00000355765 SMIM24O75264 130 aa20.42■□□□□ 0.86
PRPF39-201ENST00000355765 GH1P01241 217 aa20.42■□□□□ 0.86
PRPF39-201ENST00000355765 GNA11P29992 359 aa20.42■□□□□ 0.86
PRPF39-201ENST00000355765 ADCY1Q08828 1119 aa20.42■□□□□ 0.86
PRPF39-201ENST00000355765 PLS1Q14651 629 aa20.42■□□□□ 0.86
PRPF39-201ENST00000355765 SLC30A9Q6PML9 568 aa20.42■□□□□ 0.86
PRPF39-201ENST00000355765 ASRGL1Q7L266 308 aa20.42■□□□□ 0.86
PRPF39-201ENST00000355765 TBC1D16Q8TBP0 767 aa20.42■□□□□ 0.86
PRPF39-201ENST00000355765 PLCD4Q9BRC7 762 aa20.42■□□□□ 0.86
PRPF39-201ENST00000355765 NHSL1Q5SYE7 1610 aa20.42■□□□□ 0.86
PRPF39-201ENST00000355765 PALM3A6NDB9 673 aaPredicted RBP20.42■□□□□ 0.86
PRPF39-201ENST00000355765 KLRK1P26718 216 aa20.42■□□□□ 0.86
PRPF39-201ENST00000355765 MAPK7Q13164 816 aa20.42■□□□□ 0.86
PRPF39-201ENST00000355765 SEPT2Q15019 361 aa20.42■□□□□ 0.86
PRPF39-201ENST00000355765 PIGSQ96S52 555 aa20.42■□□□□ 0.86
PRPF39-201ENST00000355765 TSC22D3Q99576 134 aa20.42■□□□□ 0.86
PRPF39-201ENST00000355765 PIDD1Q9HB75 910 aa20.42■□□□□ 0.86
PRPF39-201ENST00000355765 BZW2Q9Y6E2 419 aaKnown RBP20.42■□□□□ 0.86
PRPF39-201ENST00000355765 ABCA3Q99758 1704 aa20.41■□□□□ 0.86
PRPF39-201ENST00000355765 HIP1RO75146 1068 aa20.41■□□□□ 0.86
PRPF39-201ENST00000355765 NEFHP12036 1026 aa20.41■□□□□ 0.86
PRPF39-201ENST00000355765 FXR2P51116 673 aaKnown RBP eCLIP20.41■□□□□ 0.86
PRPF39-201ENST00000355765 ANO7Q6IWH7 933 aa20.41■□□□□ 0.86
PRPF39-201ENST00000355765 TAOK1Q7L7X3 1001 aa20.41■□□□□ 0.86
PRPF39-201ENST00000355765 GLYCTKQ8IVS8 523 aa20.41■□□□□ 0.86
PRPF39-201ENST00000355765 UTP4Q969X6 686 aaKnown RBP20.41■□□□□ 0.86
PRPF39-201ENST00000355765 EMILIN3Q9NT22 766 aa20.41■□□□□ 0.86
PRPF39-201ENST00000355765 ATP8A2Q9NTI2 1148 aa20.41■□□□□ 0.86
PRPF39-201ENST00000355765 ARL2BPQ9Y2Y0 163 aa20.41■□□□□ 0.86
PRPF39-201ENST00000355765 COL4A1P02462 1669 aa20.41■□□□□ 0.86
PRPF39-201ENST00000355765 CETN3O15182 167 aa20.41■□□□□ 0.86
PRPF39-201ENST00000355765 RIPK2O43353 540 aa20.41■□□□□ 0.86
PRPF39-201ENST00000355765 PCK1P35558 622 aa20.41■□□□□ 0.86
PRPF39-201ENST00000355765 MGAT5Q09328 741 aa20.41■□□□□ 0.86
PRPF39-201ENST00000355765 TMEM119Q4V9L6 283 aa20.41■□□□□ 0.86
PRPF39-201ENST00000355765 CAVIN4Q5BKX8 364 aa20.41■□□□□ 0.86
PRPF39-201ENST00000355765 VPS36Q86VN1 386 aa20.41■□□□□ 0.86
PRPF39-201ENST00000355765 LNX1Q8TBB1 728 aaPredicted RBP20.41■□□□□ 0.86
PRPF39-201ENST00000355765 ALG3Q92685 438 aa20.41■□□□□ 0.86
PRPF39-201ENST00000355765 UBA5Q9GZZ9 404 aa20.41■□□□□ 0.86
PRPF39-201ENST00000355765 KCTD10Q9H3F6 313 aa20.41■□□□□ 0.86
PRPF39-201ENST00000355765 COL22A1Q8NFW1 1626 aaPredicted RBP20.41■□□□□ 0.86
PRPF39-201ENST00000355765 MXRA7P84157 204 aa20.4■□□□□ 0.86
PRPF39-201ENST00000355765 GBP7Q8N8V2 638 aaPredicted RBP20.4■□□□□ 0.86
PRPF39-201ENST00000355765 DDX23Q9BUQ8 820 aaKnown RBP20.4■□□□□ 0.86
PRPF39-201ENST00000355765 RXFP1Q9HBX9 757 aa20.4■□□□□ 0.86
PRPF39-201ENST00000355765 CTNNAL1Q9UBT7 734 aa20.4■□□□□ 0.86
PRPF39-201ENST00000355765 PTPN22Q9Y2R2 807 aa20.4■□□□□ 0.86
PRPF39-201ENST00000355765 ANKRD63C9JTQ0 380 aa20.4■□□□□ 0.86
PRPF39-201ENST00000355765 RAD23BP54727 409 aa20.4■□□□□ 0.86
PRPF39-201ENST00000355765 ARHGEF2Q92974 986 aaKnown RBP20.4■□□□□ 0.86
PRPF39-201ENST00000355765 FAM84BQ96KN1 310 aaPredicted RBP20.4■□□□□ 0.86
PRPF39-201ENST00000355765 CRAMP1Q96RY5 1269 aa20.4■□□□□ 0.86
PRPF39-201ENST00000355765 H0Y3Z8 333 aa20.4■□□□□ 0.86
PRPF39-201ENST00000355765 EDIL3O43854 480 aa20.4■□□□□ 0.86
PRPF39-201ENST00000355765 ACSL3O95573 720 aa20.4■□□□□ 0.86
PRPF39-201ENST00000355765 FESP07332 822 aa20.4■□□□□ 0.86
PRPF39-201ENST00000355765 CASP5P51878 434 aa20.4■□□□□ 0.86
PRPF39-201ENST00000355765 MARSP56192 900 aaKnown RBP20.4■□□□□ 0.86
PRPF39-201ENST00000355765 ANKLE1Q8NAG6 615 aa20.4■□□□□ 0.86
PRPF39-201ENST00000355765 PAPOLBQ9NRJ5 636 aaKnown RBP20.4■□□□□ 0.86
PRPF39-201ENST00000355765 ARMCX3Q9UH62 379 aaPredicted RBP20.4■□□□□ 0.86
PRPF39-201ENST00000355765 RASAL2Q9UJF2 1139 aa20.4■□□□□ 0.86
PRPF39-201ENST00000355765 NENFQ9UMX5 172 aa20.4■□□□□ 0.86
PRPF39-201ENST00000355765 FAM187AA6NFU0 413 aa20.39■□□□□ 0.85
PRPF39-201ENST00000355765 AFPP02771 609 aaKnown RBP20.39■□□□□ 0.85
PRPF39-201ENST00000355765 PAPOLAP51003 745 aaKnown RBP20.39■□□□□ 0.85
PRPF39-201ENST00000355765 NBPF20Q3BBV1 942 aa20.39■□□□□ 0.85
PRPF39-201ENST00000355765 SPTY2D1Q68D10 685 aaPredicted RBP20.39■□□□□ 0.85
PRPF39-201ENST00000355765 MARCH10Q8NA82 808 aaPredicted RBP20.39■□□□□ 0.85
PRPF39-201ENST00000355765 COA7Q96BR5 231 aa20.39■□□□□ 0.85
PRPF39-201ENST00000355765 ARHGEF26Q96DR7 871 aa20.39■□□□□ 0.85
PRPF39-201ENST00000355765 TMEM237Q96Q45 408 aa20.39■□□□□ 0.85
PRPF39-201ENST00000355765 RAB34Q9BZG1 259 aa20.39■□□□□ 0.85
PRPF39-201ENST00000355765 SEPT11Q9NVA2 429 aaKnown RBP20.39■□□□□ 0.85
PRPF39-201ENST00000355765 SEC63Q9UGP8 760 aaKnown RBP20.39■□□□□ 0.85
PRPF39-201ENST00000355765 ANKRD36CQ5JPF3 1778 aa20.39■□□□□ 0.85
PRPF39-201ENST00000355765 AHCYL1O43865 530 aa20.39■□□□□ 0.85
PRPF39-201ENST00000355765 MARCH6O60337 910 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms