RNA–Protein interactions for RNA: ENST00000355653.7

VAT1-201, Transcript of vesicle amine transport 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAT1, Length 2,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-201ENST00000355653 EPHA7Q15375 998 aa16.5■□□□□ 0.23
VAT1-201ENST00000355653 FRMD5Q7Z6J6 570 aa16.5■□□□□ 0.23
VAT1-201ENST00000355653 CLEC10AQ8IUN9 316 aa16.5■□□□□ 0.23
VAT1-201ENST00000355653 LINC00116Q8NCU8 138 aa16.5■□□□□ 0.23
VAT1-201ENST00000355653 CTNNBL1Q8WYA6 563 aaPredicted RBP16.5■□□□□ 0.23
VAT1-201ENST00000355653 RTCBQ9Y3I0 505 aaKnown RBP16.5■□□□□ 0.23
VAT1-201ENST00000355653 RPTORQ8N122 1335 aa16.5■□□□□ 0.23
VAT1-201ENST00000355653 KDM3AQ9Y4C1 1321 aa16.5■□□□□ 0.23
VAT1-201ENST00000355653 ARSHQ5FYA8 562 aa16.49■□□□□ 0.23
VAT1-201ENST00000355653 ZDHHC24Q6UX98 284 aa16.49■□□□□ 0.23
VAT1-201ENST00000355653 CLEC4GQ6UXB4 293 aa16.49■□□□□ 0.23
VAT1-201ENST00000355653 PPP4R3CPQ6ZMV5 832 aa16.49■□□□□ 0.23
VAT1-201ENST00000355653 BZW1Q7L1Q6 419 aaKnown RBP16.49■□□□□ 0.23
VAT1-201ENST00000355653 SPICE1Q8N0Z3 855 aa16.49■□□□□ 0.23
VAT1-201ENST00000355653 NEDD1Q8NHV4 660 aa16.49■□□□□ 0.23
VAT1-201ENST00000355653 SIX2Q9NPC8 291 aa16.49■□□□□ 0.23
VAT1-201ENST00000355653 FGFR1OP2Q9NVK5 253 aa16.49■□□□□ 0.23
VAT1-201ENST00000355653 NOP53Q9NZM5 478 aaKnown RBP16.49■□□□□ 0.23
VAT1-201ENST00000355653 SNED1Q8TER0 1413 aa16.49■□□□□ 0.23
VAT1-201ENST00000355653 PPP1R12AO14974 1030 aaPredicted RBP16.49■□□□□ 0.23
VAT1-201ENST00000355653 KIAA0391O15091 583 aaKnown RBP16.49■□□□□ 0.23
VAT1-201ENST00000355653 RARAP10276 462 aa16.49■□□□□ 0.23
VAT1-201ENST00000355653 PDE6BP35913 854 aa16.49■□□□□ 0.23
VAT1-201ENST00000355653 STAT1P42224 750 aa16.49■□□□□ 0.23
VAT1-201ENST00000355653 NCALDP61601 193 aa16.49■□□□□ 0.23
VAT1-201ENST00000355653 C6orf118Q5T5N4 469 aa16.49■□□□□ 0.23
VAT1-201ENST00000355653 SFR1Q86XK3 245 aa16.49■□□□□ 0.23
VAT1-201ENST00000355653 RIOX1Q9H6W3 641 aa16.49■□□□□ 0.23
VAT1-201ENST00000355653 RASAL2Q9UJF2 1139 aa16.49■□□□□ 0.23
VAT1-201ENST00000355653 EIF4E1BA6NMX2 242 aaKnown RBP16.48■□□□□ 0.23
VAT1-201ENST00000355653 TMEM110-MUSTN1A8MSY1 372 aa16.48■□□□□ 0.23
VAT1-201ENST00000355653 AGTP01019 485 aa16.48■□□□□ 0.23
VAT1-201ENST00000355653 PLCG2P16885 1265 aa16.48■□□□□ 0.23
VAT1-201ENST00000355653 RFC4P35249 363 aa16.48■□□□□ 0.23
VAT1-201ENST00000355653 JAM2P57087 298 aa16.48■□□□□ 0.23
VAT1-201ENST00000355653 MAP2K1Q02750 393 aaPredicted RBP16.48■□□□□ 0.23
VAT1-201ENST00000355653 MAPK7Q13164 816 aa16.48■□□□□ 0.23
VAT1-201ENST00000355653 PABPC4Q13310 644 aaKnown RBP eCLIP16.48■□□□□ 0.235e-9■■■■□ 22.6
VAT1-201ENST00000355653 MKRN4PQ13434 485 aaPredicted RBP16.48■□□□□ 0.23
VAT1-201ENST00000355653 RIPK1Q13546 671 aa16.48■□□□□ 0.23
VAT1-201ENST00000355653 KNOP1Q1ED39 458 aaKnown RBP16.48■□□□□ 0.23
VAT1-201ENST00000355653 SPDYCQ5MJ68 293 aa16.48■□□□□ 0.23
VAT1-201ENST00000355653 MAB21L3Q8N8X9 362 aa16.48■□□□□ 0.23
VAT1-201ENST00000355653 TBC1D22AQ8WUA7 517 aa16.48■□□□□ 0.23
VAT1-201ENST00000355653 RFFLQ8WZ73 363 aa16.48■□□□□ 0.23
VAT1-201ENST00000355653 KLHL29Q96CT2 875 aa16.48■□□□□ 0.23
VAT1-201ENST00000355653 ARHGEF26Q96DR7 871 aa16.48■□□□□ 0.23
VAT1-201ENST00000355653 NAP1L3Q99457 506 aaPredicted RBP16.48■□□□□ 0.23
VAT1-201ENST00000355653 NENFQ9UMX5 172 aa16.48■□□□□ 0.23
VAT1-201ENST00000355653 TCP11X1B4DZS4 312 aa16.48■□□□□ 0.23
VAT1-201ENST00000355653 MED24O75448 989 aa16.48■□□□□ 0.23
VAT1-201ENST00000355653 RPL21P46778 160 aaKnown RBP16.48■□□□□ 0.23
VAT1-201ENST00000355653 ADCY2Q08462 1091 aa16.48■□□□□ 0.23
VAT1-201ENST00000355653 ALG3Q92685 438 aa16.48■□□□□ 0.23
VAT1-201ENST00000355653 L3MBTL3Q96JM7 780 aaPredicted RBP16.48■□□□□ 0.23
VAT1-201ENST00000355653 ZNF570Q96NI8 536 aa16.48■□□□□ 0.23
VAT1-201ENST00000355653 NLRP3Q96P20 1036 aa16.48■□□□□ 0.23
VAT1-201ENST00000355653 SRP68Q9UHB9 627 aaKnown RBP16.48■□□□□ 0.23
VAT1-201ENST00000355653 PTPN22Q9Y2R2 807 aa16.48■□□□□ 0.23
VAT1-201ENST00000355653 SPATA31A1Q5TZJ5 1347 aa16.48■□□□□ 0.23
VAT1-201ENST00000355653 RASGRF2O14827 1237 aa16.47■□□□□ 0.23
VAT1-201ENST00000355653 SNX3O60493 162 aa16.47■□□□□ 0.23
VAT1-201ENST00000355653 FERP16591 822 aa16.47■□□□□ 0.23
VAT1-201ENST00000355653 NPEPPSP55786 919 aa16.47■□□□□ 0.23
VAT1-201ENST00000355653 ZNF268Q14587 947 aaPredicted RBP16.47■□□□□ 0.23
VAT1-201ENST00000355653 PLS1Q14651 629 aa16.47■□□□□ 0.23
VAT1-201ENST00000355653 CNGA2Q16280 664 aa16.47■□□□□ 0.23
VAT1-201ENST00000355653 BARGINQ6ZT62 677 aa16.47■□□□□ 0.23
VAT1-201ENST00000355653 ZC3H3Q8IXZ2 948 aaKnown RBP16.47■□□□□ 0.23
VAT1-201ENST00000355653 CCHCR1Q8TD31 782 aa16.47■□□□□ 0.23
VAT1-201ENST00000355653 MICAL1Q8TDZ2 1067 aa16.47■□□□□ 0.23
VAT1-201ENST00000355653 THAP2Q9H0W7 228 aa16.47■□□□□ 0.23
VAT1-201ENST00000355653 BCAS3Q9H6U6 928 aa16.47■□□□□ 0.23
VAT1-201ENST00000355653 TRIM33Q9UPN9 1127 aa16.47■□□□□ 0.23
VAT1-201ENST00000355653 NR3C1P04150 777 aa16.47■□□□□ 0.23
VAT1-201ENST00000355653 KRT16P08779 473 aa16.47■□□□□ 0.23
VAT1-201ENST00000355653 HOXD13P35453 343 aa16.47■□□□□ 0.23
VAT1-201ENST00000355653 PDE6CP51160 858 aa16.47■□□□□ 0.23
VAT1-201ENST00000355653 PSMC6P62333 389 aa16.47■□□□□ 0.23
VAT1-201ENST00000355653 ZKSCAN8Q15776 578 aaPredicted RBP16.47■□□□□ 0.23
VAT1-201ENST00000355653 C16orf86Q6ZW13 317 aa16.47■□□□□ 0.23
VAT1-201ENST00000355653 ANKRD42Q8N9B4 389 aa16.47■□□□□ 0.23
VAT1-201ENST00000355653 GPR101Q96P66 508 aaPredicted RBP16.47■□□□□ 0.23
VAT1-201ENST00000355653 ANKRD2Q9GZV1 360 aa16.47■□□□□ 0.23
VAT1-201ENST00000355653 CARD9Q9H257 536 aa16.47■□□□□ 0.23
VAT1-201ENST00000355653 IKZF4Q9H2S9 585 aa16.47■□□□□ 0.23
VAT1-201ENST00000355653 DHX36Q9H2U1 1008 aaKnown RBP16.47■□□□□ 0.23
VAT1-201ENST00000355653 TAS2R14Q9NYV8 317 aa16.47■□□□□ 0.23
VAT1-201ENST00000355653 ANKIB1Q9P2G1 1089 aa16.47■□□□□ 0.23
VAT1-201ENST00000355653 TTC7AQ9ULT0 858 aaPredicted RBP16.47■□□□□ 0.23
VAT1-201ENST00000355653 FAM187AA6NFU0 413 aa16.47■□□□□ 0.23
VAT1-201ENST00000355653 CALUO43852 315 aaPredicted RBP16.47■□□□□ 0.23
VAT1-201ENST00000355653 SLC16A2P36021 539 aa16.47■□□□□ 0.23
VAT1-201ENST00000355653 BTDP43251 543 aa16.47■□□□□ 0.23
VAT1-201ENST00000355653 KCNA1Q09470 495 aa16.47■□□□□ 0.23
VAT1-201ENST00000355653 DHX34Q14147 1143 aaKnown RBP16.47■□□□□ 0.23
VAT1-201ENST00000355653 LONRF1Q17RB8 773 aa16.47■□□□□ 0.23
VAT1-201ENST00000355653 NUGGCQ68CJ6 796 aa16.47■□□□□ 0.23
VAT1-201ENST00000355653 ERICH1Q86X53 443 aa16.47■□□□□ 0.23
VAT1-201ENST00000355653 COL23A1Q86Y22 540 aaPredicted RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms