RNA–Protein interactions for RNA: ENST00000353414.8

COL11A1-201, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-201ENST00000353414 USP17L6PQ6QN14 398 aa10.67□□□□□ -0.7
COL11A1-201ENST00000353414 PPP1R13BQ96KQ4 1090 aa10.67□□□□□ -0.7
COL11A1-201ENST00000353414 SEPT5Q99719 369 aaPredicted RBP10.67□□□□□ -0.7
COL11A1-201ENST00000353414 JPH2Q9BR39 696 aaPredicted RBP10.67□□□□□ -0.7
COL11A1-201ENST00000353414 KANSL2Q9H9L4 492 aa10.67□□□□□ -0.7
COL11A1-201ENST00000353414 PCDHA6Q9UN73 950 aa10.67□□□□□ -0.7
COL11A1-201ENST00000353414 PCDHA8Q9Y5H6 950 aa10.67□□□□□ -0.7
COL11A1-201ENST00000353414 EDC4Q6P2E9 1401 aaKnown RBP10.67□□□□□ -0.7
COL11A1-201ENST00000353414 SEMA3EO15041 775 aa10.67□□□□□ -0.7
COL11A1-201ENST00000353414 FAM47EQ6ZV65 393 aa10.67□□□□□ -0.7
COL11A1-201ENST00000353414 HS6ST3Q8IZP7 471 aa10.67□□□□□ -0.7
COL11A1-201ENST00000353414 RNF25Q96BH1 459 aaPredicted RBP10.67□□□□□ -0.7
COL11A1-201ENST00000353414 ZBTB18Q99592 522 aa10.67□□□□□ -0.7
COL11A1-201ENST00000353414 ALG13Q9NP73 1137 aaKnown RBP10.67□□□□□ -0.7
COL11A1-201ENST00000353414 CARMIL3Q8ND23 1372 aa10.67□□□□□ -0.7
COL11A1-201ENST00000353414 SPDYE5A6NIY4 337 aa10.67□□□□□ -0.7
COL11A1-201ENST00000353414 LTKP29376 864 aa10.67□□□□□ -0.7
COL11A1-201ENST00000353414 KCNJ6P48051 423 aa10.67□□□□□ -0.7
COL11A1-201ENST00000353414 DHX9Q08211 1270 aaKnown RBP10.67□□□□□ -0.7
COL11A1-201ENST00000353414 SPP2Q13103 211 aa10.67□□□□□ -0.7
COL11A1-201ENST00000353414 SPDYE7PQ495Y7 208 aa10.67□□□□□ -0.7
COL11A1-201ENST00000353414 LRRC23Q53EV4 343 aaPredicted RBP10.67□□□□□ -0.7
COL11A1-201ENST00000353414 RGS9BPQ6ZS82 235 aa10.67□□□□□ -0.7
COL11A1-201ENST00000353414 SLC44A5Q8NCS7 719 aa10.67□□□□□ -0.7
COL11A1-201ENST00000353414 ARL8AQ96BM9 186 aa10.67□□□□□ -0.7
COL11A1-201ENST00000353414 ADA2Q9NZK5 511 aa10.67□□□□□ -0.7
COL11A1-201ENST00000353414 NOVA2Q9UNW9 492 aaKnown RBP10.67□□□□□ -0.7
COL11A1-201ENST00000353414 PCDHB6Q9Y5E3 794 aa10.67□□□□□ -0.7
COL11A1-201ENST00000353414 ATP7AQ04656 1500 aa10.67□□□□□ -0.7
COL11A1-201ENST00000353414 A0A0G2JLW4 131 aa10.67□□□□□ -0.7
COL11A1-201ENST00000353414 HSPA6P17066 643 aa10.67□□□□□ -0.7
COL11A1-201ENST00000353414 KIF12Q96FN5 646 aa10.67□□□□□ -0.7
COL11A1-201ENST00000353414 TRAF3IP3Q9Y228 551 aa10.67□□□□□ -0.7
COL11A1-201ENST00000353414 PCDHA13Q9Y5I0 950 aa10.67□□□□□ -0.7
COL11A1-201ENST00000353414 PTPRKQ15262 1439 aa10.67□□□□□ -0.7
COL11A1-201ENST00000353414 PPARGP37231 505 aaPredicted RBP10.67□□□□□ -0.7
COL11A1-201ENST00000353414 ZNF667Q5HYK9 610 aa10.67□□□□□ -0.7
COL11A1-201ENST00000353414 GPATCH4Q5T3I0 446 aaKnown RBP10.67□□□□□ -0.7
COL11A1-201ENST00000353414 RC3H1Q5TC82 1133 aaKnown RBP10.67□□□□□ -0.7
COL11A1-201ENST00000353414 GSPT2Q8IYD1 628 aaKnown RBP10.67□□□□□ -0.7
COL11A1-201ENST00000353414 DYDC2Q96IM9 177 aa10.67□□□□□ -0.7
COL11A1-201ENST00000353414 ZSWIM5Q9P217 1185 aa10.67□□□□□ -0.7
COL11A1-201ENST00000353414 PJA2O43164 708 aa10.66□□□□□ -0.7
COL11A1-201ENST00000353414 TFRCP02786 760 aaKnown RBP10.66□□□□□ -0.7
COL11A1-201ENST00000353414 SKOR1P84550 965 aa10.66□□□□□ -0.7
COL11A1-201ENST00000353414 TJAP1Q5JTD0 557 aa10.66□□□□□ -0.7
COL11A1-201ENST00000353414 LRRC31Q6UY01 552 aa10.66□□□□□ -0.7
COL11A1-201ENST00000353414 MRPL47Q9HD33 250 aaKnown RBP10.66□□□□□ -0.7
COL11A1-201ENST00000353414 H0Y3Z8 333 aa10.66□□□□□ -0.7
COL11A1-201ENST00000353414 PRRG1O14668 218 aa10.66□□□□□ -0.7
COL11A1-201ENST00000353414 DIAPH2O60879 1101 aa10.66□□□□□ -0.7
COL11A1-201ENST00000353414 TADA2AO75478 443 aa10.66□□□□□ -0.7
COL11A1-201ENST00000353414 ZNF211Q13398 564 aaPredicted RBP10.66□□□□□ -0.7
COL11A1-201ENST00000353414 PAN2Q504Q3 1202 aaKnown RBP10.66□□□□□ -0.7
COL11A1-201ENST00000353414 KCNV2Q8TDN2 545 aa10.66□□□□□ -0.7
COL11A1-201ENST00000353414 TMEM206Q9H813 350 aa10.66□□□□□ -0.7
COL11A1-201ENST00000353414 BCL2L12Q9HB09 334 aa10.66□□□□□ -0.7
COL11A1-201ENST00000353414 ZNF302Q9NR11 478 aa10.66□□□□□ -0.7
COL11A1-201ENST00000353414 NPHP3-ACAD11A0A0J9YXS1 232 aa10.66□□□□□ -0.7
COL11A1-201ENST00000353414 POTEMA6NI47 508 aa10.66□□□□□ -0.7
COL11A1-201ENST00000353414 GAP43P17677 238 aa10.66□□□□□ -0.7
COL11A1-201ENST00000353414 TAC1P20366 129 aa10.66□□□□□ -0.7
COL11A1-201ENST00000353414 BRD2P25440 801 aaKnown RBP10.66□□□□□ -0.7
COL11A1-201ENST00000353414 YY1P25490 414 aa10.66□□□□□ -0.7
COL11A1-201ENST00000353414 LMNB2Q03252 620 aa10.66□□□□□ -0.7
COL11A1-201ENST00000353414 CEP70Q8NHQ1 597 aa10.66□□□□□ -0.7
COL11A1-201ENST00000353414 CYP4F11Q9HBI6 524 aa10.66□□□□□ -0.7
COL11A1-201ENST00000353414 MLH3Q9UHC1 1453 aa10.66□□□□□ -0.7
COL11A1-201ENST00000353414 PCCAP05165 728 aaPredicted RBP10.66□□□□□ -0.7
COL11A1-201ENST00000353414 HOXD10P28358 340 aa10.66□□□□□ -0.7
COL11A1-201ENST00000353414 TCEA2Q15560 299 aa10.66□□□□□ -0.7
COL11A1-201ENST00000353414 NBPF20Q3BBV1 942 aa10.66□□□□□ -0.7
COL11A1-201ENST00000353414 SUSD4Q5VX71 490 aa10.66□□□□□ -0.7
COL11A1-201ENST00000353414 NBPF10Q6P3W6 841 aaKnown RBP10.66□□□□□ -0.7
COL11A1-201ENST00000353414 CCDC197Q8NCU1 140 aa10.66□□□□□ -0.7
COL11A1-201ENST00000353414 BBOF1Q8ND07 529 aa10.66□□□□□ -0.7
COL11A1-201ENST00000353414 GSDMAQ96QA5 445 aa10.66□□□□□ -0.7
COL11A1-201ENST00000353414 WDR11Q9BZH6 1224 aa10.66□□□□□ -0.7
COL11A1-201ENST00000353414 PALMDQ9NP74 551 aa10.66□□□□□ -0.7
COL11A1-201ENST00000353414 GABBR1Q9UBS5 961 aa10.66□□□□□ -0.7
COL11A1-201ENST00000353414 WARS2Q9UGM6 360 aaKnown RBP10.66□□□□□ -0.7
COL11A1-201ENST00000353414 FOSP01100 380 aaPredicted RBP10.66□□□□□ -0.7
COL11A1-201ENST00000353414 TMPRSS15P98073 1019 aa10.66□□□□□ -0.7
COL11A1-201ENST00000353414 TAF1BQ53T94 588 aaPredicted RBP10.66□□□□□ -0.7
COL11A1-201ENST00000353414 ATP11CQ8NB49 1132 aa10.66□□□□□ -0.7
COL11A1-201ENST00000353414 TTLL11Q8NHH1 800 aa10.66□□□□□ -0.7
COL11A1-201ENST00000353414 ENOX1Q8TC92 643 aaKnown RBP10.66□□□□□ -0.7
COL11A1-201ENST00000353414 USP44Q9H0E7 712 aa10.66□□□□□ -0.7
COL11A1-201ENST00000353414 UBE4BO95155 1302 aa10.66□□□□□ -0.7
COL11A1-201ENST00000353414 ADGRA2Q96PE1 1338 aa10.66□□□□□ -0.7
COL11A1-201ENST00000353414 ARAP3Q8WWN8 1544 aa10.66□□□□□ -0.7
COL11A1-201ENST00000353414 ARHGAP10A1A4S6 786 aa10.65□□□□□ -0.7
COL11A1-201ENST00000353414 PDGFRBP09619 1106 aa10.65□□□□□ -0.7
COL11A1-201ENST00000353414 GPSM2P81274 684 aa10.65□□□□□ -0.7
COL11A1-201ENST00000353414 DPCR1Q3MIW9 517 aa10.65□□□□□ -0.7
COL11A1-201ENST00000353414 SGO1Q5FBB7 561 aa10.65□□□□□ -0.7
COL11A1-201ENST00000353414 MUC3BQ9H195 1237 aa10.65□□□□□ -0.7
COL11A1-201ENST00000353414 FGFR1OP2Q9NVK5 253 aa10.65□□□□□ -0.7
COL11A1-201ENST00000353414 PIN4Q9Y237 131 aaKnown RBP10.65□□□□□ -0.7
COL11A1-201ENST00000353414 RIMS1Q86UR5 1692 aaKnown RBP10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms