RNA–Protein interactions for RNA: ENST00000353047.10

CTSB-202, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 3,875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-202ENST00000353047 EAPPQ56P03 285 aaPredicted RBP19.5■□□□□ 0.71
CTSB-202ENST00000353047 PASD1Q8IV76 773 aa19.5■□□□□ 0.71
CTSB-202ENST00000353047 SLC20A1Q8WUM9 679 aa19.5■□□□□ 0.71
CTSB-202ENST00000353047 CAVIN3Q969G5 261 aa19.5■□□□□ 0.71
CTSB-202ENST00000353047 NAP1L3Q99457 506 aaPredicted RBP19.5■□□□□ 0.71
CTSB-202ENST00000353047 BAZ2AQ9UIF9 1905 aaKnown RBP19.5■□□□□ 0.71
CTSB-202ENST00000353047 MYH13Q9UKX3 1938 aa19.5■□□□□ 0.71
CTSB-202ENST00000353047 SPAG7O75391 227 aa19.5■□□□□ 0.71
CTSB-202ENST00000353047 ATF7P17544 494 aaPredicted RBP19.5■□□□□ 0.71
CTSB-202ENST00000353047 PCK1P35558 622 aa19.5■□□□□ 0.71
CTSB-202ENST00000353047 MARCKSL1P49006 195 aa19.5■□□□□ 0.71
CTSB-202ENST00000353047 SYCP2LQ5T4T6 812 aa19.5■□□□□ 0.71
CTSB-202ENST00000353047 CCDC137Q6PK04 289 aaKnown RBP19.5■□□□□ 0.71
CTSB-202ENST00000353047 CCDC6Q16204 474 aa19.49■□□□□ 0.71
CTSB-202ENST00000353047 HAS1Q92839 578 aa19.49■□□□□ 0.71
CTSB-202ENST00000353047 XPO6Q96QU8 1125 aaKnown RBP19.49■□□□□ 0.71
CTSB-202ENST00000353047 DAGLAQ9Y4D2 1042 aa19.49■□□□□ 0.71
CTSB-202ENST00000353047 ZNF543Q08ER8 600 aa19.49■□□□□ 0.71
CTSB-202ENST00000353047 GRAPQ13588 217 aa19.49■□□□□ 0.71
CTSB-202ENST00000353047 STXBP4Q6ZWJ1 553 aa19.49■□□□□ 0.71
CTSB-202ENST00000353047 RPUSD2Q8IZ73 545 aaKnown RBP19.49■□□□□ 0.71
CTSB-202ENST00000353047 GRAPLQ8TC17 118 aaPredicted RBP19.49■□□□□ 0.71
CTSB-202ENST00000353047 ARHGEF26Q96DR7 871 aa19.49■□□□□ 0.71
CTSB-202ENST00000353047 C9orf72Q96LT7 481 aa19.49■□□□□ 0.71
CTSB-202ENST00000353047 CEP63Q96MT8 703 aa19.49■□□□□ 0.71
CTSB-202ENST00000353047 INPP4AQ96PE3 977 aaPredicted RBP19.49■□□□□ 0.71
CTSB-202ENST00000353047 GDF3Q9NR23 364 aa19.49■□□□□ 0.71
CTSB-202ENST00000353047 PCDHAC2Q9Y5I4 1007 aa19.49■□□□□ 0.71
CTSB-202ENST00000353047 TCP10L2B9ZVM9 353 aa19.49■□□□□ 0.71
CTSB-202ENST00000353047 PIAS1O75925 651 aa19.49■□□□□ 0.71
CTSB-202ENST00000353047 YY1P25490 414 aa19.49■□□□□ 0.71
CTSB-202ENST00000353047 SCTRP47872 440 aa19.49■□□□□ 0.71
CTSB-202ENST00000353047 ZBTB16Q05516 673 aa19.49■□□□□ 0.71
CTSB-202ENST00000353047 ITGB3BPQ13352 177 aaPredicted RBP19.49■□□□□ 0.71
CTSB-202ENST00000353047 TMED2Q15363 201 aa19.49■□□□□ 0.71
CTSB-202ENST00000353047 RBM26Q5T8P6 1007 aaKnown RBP19.49■□□□□ 0.71
CTSB-202ENST00000353047 SAAL1Q96ER3 474 aa19.49■□□□□ 0.71
CTSB-202ENST00000353047 PWWP2AQ96N64 755 aa19.49■□□□□ 0.71
CTSB-202ENST00000353047 VPS37BQ9H9H4 285 aa19.49■□□□□ 0.71
CTSB-202ENST00000353047 ALG13Q9NP73 1137 aaKnown RBP19.49■□□□□ 0.71
CTSB-202ENST00000353047 INTUQ9ULD6 942 aa19.49■□□□□ 0.71
CTSB-202ENST00000353047 SUFUQ9UMX1 484 aa19.49■□□□□ 0.71
CTSB-202ENST00000353047 GOLGA8SH3BPF8 625 aa19.48■□□□□ 0.71
CTSB-202ENST00000353047 GOLGA8MH3BSY2 632 aa19.48■□□□□ 0.71
CTSB-202ENST00000353047 SGO2Q562F6 1265 aa19.48■□□□□ 0.71
CTSB-202ENST00000353047 RFX8Q6ZV50 586 aa19.48■□□□□ 0.71
CTSB-202ENST00000353047 BZW2Q9Y6E2 419 aaKnown RBP19.48■□□□□ 0.71
CTSB-202ENST00000353047 LMO7Q8WWI1 1683 aa19.48■□□□□ 0.71
CTSB-202ENST00000353047 DDX3XO00571 662 aaKnown RBP eCLIP19.48■□□□□ 0.718e-12■■■■■ 32.2
CTSB-202ENST00000353047 BCRP11274 1271 aa19.48■□□□□ 0.71
CTSB-202ENST00000353047 FAM182AQ5T1J6 154 aa19.48■□□□□ 0.71
CTSB-202ENST00000353047 DAB2IPQ5VWQ8 1189 aa19.48■□□□□ 0.71
CTSB-202ENST00000353047 CLEC4GQ6UXB4 293 aa19.48■□□□□ 0.71
CTSB-202ENST00000353047 DNAJC19Q96DA6 116 aa19.48■□□□□ 0.71
CTSB-202ENST00000353047 AMNQ9BXJ7 453 aa19.48■□□□□ 0.71
CTSB-202ENST00000353047 CLDN3O15551 220 aa19.48■□□□□ 0.71
CTSB-202ENST00000353047 TRIM37O94972 964 aa19.48■□□□□ 0.71
CTSB-202ENST00000353047 PRLRP16471 622 aa19.48■□□□□ 0.71
CTSB-202ENST00000353047 JAMLQ86YT9 394 aa19.48■□□□□ 0.71
CTSB-202ENST00000353047 PRCCQ92733 491 aaPredicted RBP19.48■□□□□ 0.71
CTSB-202ENST00000353047 ARHGEF2Q92974 986 aaKnown RBP19.48■□□□□ 0.71
CTSB-202ENST00000353047 METTL14Q9HCE5 456 aaKnown RBP19.48■□□□□ 0.71
CTSB-202ENST00000353047 ALG6Q9Y672 507 aa19.48■□□□□ 0.71
CTSB-202ENST00000353047 FOXN3O00409 490 aaPredicted RBP19.47■□□□□ 0.71
CTSB-202ENST00000353047 SPATS2Q86XZ4 545 aaKnown RBP19.47■□□□□ 0.71
CTSB-202ENST00000353047 SLC17A8Q8NDX2 589 aa19.47■□□□□ 0.71
CTSB-202ENST00000353047 FBF1Q8TES7 1133 aa19.47■□□□□ 0.71
CTSB-202ENST00000353047 KRT35Q92764 455 aa19.47■□□□□ 0.71
CTSB-202ENST00000353047 LACTBP83111 547 aaPredicted RBP19.47■□□□□ 0.71
CTSB-202ENST00000353047 FAM102BQ5T8I3 360 aa19.47■□□□□ 0.71
CTSB-202ENST00000353047 PPP1R18Q6NYC8 613 aa19.47■□□□□ 0.71
CTSB-202ENST00000353047 C16orf86Q6ZW13 317 aa19.47■□□□□ 0.71
CTSB-202ENST00000353047 MIGA2Q7L4E1 593 aa19.47■□□□□ 0.71
CTSB-202ENST00000353047 PALB2Q86YC2 1186 aa19.47■□□□□ 0.71
CTSB-202ENST00000353047 PARVGQ9HBI0 331 aa19.47■□□□□ 0.71
CTSB-202ENST00000353047 LRRC4CQ9HCJ2 640 aa19.47■□□□□ 0.71
CTSB-202ENST00000353047 CCDC188H7C350 402 aa19.47■□□□□ 0.71
CTSB-202ENST00000353047 DIAPH2O60879 1101 aa19.47■□□□□ 0.71
CTSB-202ENST00000353047 GH2P01242 217 aa19.47■□□□□ 0.71
CTSB-202ENST00000353047 LMNB1P20700 586 aa19.47■□□□□ 0.71
CTSB-202ENST00000353047 FXR2P51116 673 aaKnown RBP eCLIP19.47■□□□□ 0.71
CTSB-202ENST00000353047 CDK17Q00537 523 aa19.47■□□□□ 0.71
CTSB-202ENST00000353047 PDIA5Q14554 519 aa19.47■□□□□ 0.71
CTSB-202ENST00000353047 KYNUQ16719 465 aa19.47■□□□□ 0.71
CTSB-202ENST00000353047 TNS2Q63HR2 1409 aa19.47■□□□□ 0.71
CTSB-202ENST00000353047 RBM46Q8TBY0 533 aaKnown RBP19.47■□□□□ 0.71
CTSB-202ENST00000353047 ZKSCAN4Q969J2 545 aaPredicted RBP19.47■□□□□ 0.71
CTSB-202ENST00000353047 EIF2AK1Q9BQI3 630 aaKnown RBP19.47■□□□□ 0.71
CTSB-202ENST00000353047 TPX2Q9ULW0 747 aaKnown RBP19.47■□□□□ 0.71
CTSB-202ENST00000353047 ZC3H4Q9UPT8 1303 aaKnown RBP19.47■□□□□ 0.71
CTSB-202ENST00000353047 CRYBG1Q9Y4K1 1723 aa19.46■□□□□ 0.71
CTSB-202ENST00000353047 DNM1LO00429 736 aa19.46■□□□□ 0.71
CTSB-202ENST00000353047 CYP26A1O43174 497 aa19.46■□□□□ 0.71
CTSB-202ENST00000353047 SPRED3Q2MJR0 410 aa19.46■□□□□ 0.71
CTSB-202ENST00000353047 TAOK1Q7L7X3 1001 aa19.46■□□□□ 0.71
CTSB-202ENST00000353047 PURBQ96QR8 312 aaKnown RBP19.46■□□□□ 0.71
CTSB-202ENST00000353047 PPP1R1BQ9UD71 204 aaPredicted RBP19.46■□□□□ 0.71
CTSB-202ENST00000353047 AJAP1Q9UKB5 411 aaPredicted RBP19.46■□□□□ 0.71
CTSB-202ENST00000353047 BCL9O00512 1426 aa19.46■□□□□ 0.71
CTSB-202ENST00000353047 SMAD1Q15797 465 aaKnown RBP19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms