RNA–Protein interactions for RNA: ENST00000349496.9

CTNNB1-201, Transcript of catenin beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNNB1, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-201ENST00000349496 TXLNGQ9NUQ3 528 aa13.13□□□□□ -0.31
CTNNB1-201ENST00000349496 CYP39A1Q9NYL5 469 aa13.13□□□□□ -0.31
CTNNB1-201ENST00000349496 DDX25Q9UHL0 483 aaKnown RBP13.13□□□□□ -0.31
CTNNB1-201ENST00000349496 FAM153AQ9UHL3 310 aa13.13□□□□□ -0.31
CTNNB1-201ENST00000349496 E7EWF7 191 aa13.12□□□□□ -0.31
CTNNB1-201ENST00000349496 MFAP3LO75121 409 aa13.12□□□□□ -0.31
CTNNB1-201ENST00000349496 RXRGP48443 463 aa13.12□□□□□ -0.31
CTNNB1-201ENST00000349496 PPIDQ08752 370 aaKnown RBP13.12□□□□□ -0.31
CTNNB1-201ENST00000349496 PTK7Q13308 1070 aa13.12□□□□□ -0.31
CTNNB1-201ENST00000349496 FOXB2Q5VYV0 432 aa13.12□□□□□ -0.31
CTNNB1-201ENST00000349496 FAM186BQ8IYM0 893 aa13.12□□□□□ -0.31
CTNNB1-201ENST00000349496 NAT14Q8WUY8 206 aa13.12□□□□□ -0.31
CTNNB1-201ENST00000349496 RPGRQ92834 1020 aaKnown RBP13.12□□□□□ -0.31
CTNNB1-201ENST00000349496 GREM2Q9H772 168 aa13.12□□□□□ -0.31
CTNNB1-201ENST00000349496 AS3MTQ9HBK9 375 aa13.12□□□□□ -0.31
CTNNB1-201ENST00000349496 KCNK9Q9NPC2 374 aa13.12□□□□□ -0.31
CTNNB1-201ENST00000349496 TELO2Q9Y4R8 837 aa13.12□□□□□ -0.31
CTNNB1-201ENST00000349496 GOLGA8JA6NMD2 632 aa13.12□□□□□ -0.31
CTNNB1-201ENST00000349496 GOLGA8TH3BQL2 631 aa13.12□□□□□ -0.31
CTNNB1-201ENST00000349496 HIP1O00291 1037 aa13.12□□□□□ -0.31
CTNNB1-201ENST00000349496 IFIT3O14879 490 aaKnown RBP13.12□□□□□ -0.31
CTNNB1-201ENST00000349496 TMCC2O75069 709 aa13.12□□□□□ -0.31
CTNNB1-201ENST00000349496 GOLGA8HP0CJ92 632 aa13.12□□□□□ -0.31
CTNNB1-201ENST00000349496 PFKFB1P16118 471 aa13.12□□□□□ -0.31
CTNNB1-201ENST00000349496 ITIH4Q14624 930 aa13.12□□□□□ -0.31
CTNNB1-201ENST00000349496 ZC2HC1CQ53FD0 456 aaPredicted RBP13.12□□□□□ -0.31
CTNNB1-201ENST00000349496 MARK2Q7KZI7 788 aaKnown RBP13.12□□□□□ -0.31
CTNNB1-201ENST00000349496 IFNLR1Q8IU57 520 aaPredicted RBP13.12□□□□□ -0.31
CTNNB1-201ENST00000349496 KBTBD3Q8NAB2 608 aa13.12□□□□□ -0.31
CTNNB1-201ENST00000349496 CEP63Q96MT8 703 aa13.12□□□□□ -0.31
CTNNB1-201ENST00000349496 CYTH2Q99418 400 aa13.12□□□□□ -0.31
CTNNB1-201ENST00000349496 SLC12A4Q9UP95 1085 aa13.12□□□□□ -0.31
CTNNB1-201ENST00000349496 CHN1P15882 459 aa13.12□□□□□ -0.31
CTNNB1-201ENST00000349496 PPP2R5BQ15173 497 aa13.12□□□□□ -0.31
CTNNB1-201ENST00000349496 TTC39AQ5SRH9 613 aa13.12□□□□□ -0.31
CTNNB1-201ENST00000349496 TTC1Q99614 292 aa13.12□□□□□ -0.31
CTNNB1-201ENST00000349496 HNRNPABQ99729 332 aaKnown RBP13.12□□□□□ -0.31
CTNNB1-201ENST00000349496 ZKSCAN3Q9BRR0 538 aa13.12□□□□□ -0.31
CTNNB1-201ENST00000349496 TIMM22Q9Y584 194 aa13.12□□□□□ -0.31
CTNNB1-201ENST00000349496 UTYO14607 1347 aa13.12□□□□□ -0.31
CTNNB1-201ENST00000349496 PASKQ96RG2 1323 aa13.12□□□□□ -0.31
CTNNB1-201ENST00000349496 A0A1W2PQ67 120 aa13.11□□□□□ -0.31
CTNNB1-201ENST00000349496 PDE2AO00408 941 aaPredicted RBP13.11□□□□□ -0.31
CTNNB1-201ENST00000349496 MZF1P28698 734 aaPredicted RBP13.11□□□□□ -0.31
CTNNB1-201ENST00000349496 SULT2A1Q06520 285 aa13.11□□□□□ -0.31
CTNNB1-201ENST00000349496 MSLNQ13421 630 aaPredicted RBP13.11□□□□□ -0.31
CTNNB1-201ENST00000349496 PCSK7Q16549 785 aa13.11□□□□□ -0.31
CTNNB1-201ENST00000349496 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.11□□□□□ -0.31
CTNNB1-201ENST00000349496 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.11□□□□□ -0.31
CTNNB1-201ENST00000349496 ENGASEQ8NFI3 743 aa13.11□□□□□ -0.31
CTNNB1-201ENST00000349496 KRT12Q99456 494 aa13.11□□□□□ -0.31
CTNNB1-201ENST00000349496 PNMA3Q9UL41 463 aa13.11□□□□□ -0.31
CTNNB1-201ENST00000349496 SRRM3A6NNA2 597 aaPredicted RBP13.11□□□□□ -0.31
CTNNB1-201ENST00000349496 E7ENQ6 273 aa13.11□□□□□ -0.31
CTNNB1-201ENST00000349496 ENTPD5O75356 428 aa13.11□□□□□ -0.31
CTNNB1-201ENST00000349496 VWA3BQ502W6 1294 aa13.11□□□□□ -0.31
CTNNB1-201ENST00000349496 RAVER1Q8IY67 606 aaKnown RBP13.11□□□□□ -0.31
CTNNB1-201ENST00000349496 PIGBQ92521 554 aa13.11□□□□□ -0.31
CTNNB1-201ENST00000349496 HEPHQ9BQS7 1158 aa13.11□□□□□ -0.31
CTNNB1-201ENST00000349496 DHX36Q9H2U1 1008 aaKnown RBP13.11□□□□□ -0.31
CTNNB1-201ENST00000349496 TUT1Q9H6E5 874 aaKnown RBP13.11□□□□□ -0.31
CTNNB1-201ENST00000349496 TMBIM4Q9HC24 238 aa13.11□□□□□ -0.31
CTNNB1-201ENST00000349496 JAG2Q9Y219 1238 aa13.11□□□□□ -0.31
CTNNB1-201ENST00000349496 MED1Q15648 1581 aaPredicted RBP13.11□□□□□ -0.31
CTNNB1-201ENST00000349496 CAPN9O14815 690 aa13.11□□□□□ -0.31
CTNNB1-201ENST00000349496 NDUFA10O95299 355 aa13.11□□□□□ -0.31
CTNNB1-201ENST00000349496 ENO2P09104 434 aaPredicted RBP13.11□□□□□ -0.31
CTNNB1-201ENST00000349496 KRT4P19013 534 aa13.11□□□□□ -0.31
CTNNB1-201ENST00000349496 KIAA2013Q8IYS2 634 aa13.11□□□□□ -0.31
CTNNB1-201ENST00000349496 ANKRD42Q8N9B4 389 aa13.11□□□□□ -0.31
CTNNB1-201ENST00000349496 TNIP2Q8NFZ5 429 aa13.11□□□□□ -0.31
CTNNB1-201ENST00000349496 PRMT1Q99873 361 aaKnown RBP13.11□□□□□ -0.31
CTNNB1-201ENST00000349496 BHMT2Q9H2M3 363 aa13.11□□□□□ -0.31
CTNNB1-201ENST00000349496 MRPL46Q9H2W6 279 aaKnown RBP13.11□□□□□ -0.31
CTNNB1-201ENST00000349496 SERPINA10Q9UK55 444 aa13.11□□□□□ -0.31
CTNNB1-201ENST00000349496 STX8Q9UNK0 236 aa13.11□□□□□ -0.31
CTNNB1-201ENST00000349496 EP400Q96L91 3159 aa13.1□□□□□ -0.31
CTNNB1-201ENST00000349496 ZSCAN5CA6NGD5 496 aaPredicted RBP13.1□□□□□ -0.31
CTNNB1-201ENST00000349496 EYA2O00167 538 aa13.1□□□□□ -0.31
CTNNB1-201ENST00000349496 AMPD2Q01433 879 aa13.1□□□□□ -0.31
CTNNB1-201ENST00000349496 CNGA3Q16281 694 aa13.1□□□□□ -0.31
CTNNB1-201ENST00000349496 ZNF362Q5T0B9 420 aaPredicted RBP13.1□□□□□ -0.31
CTNNB1-201ENST00000349496 CATIPQ7Z7H3 387 aa13.1□□□□□ -0.31
CTNNB1-201ENST00000349496 SLC51AQ86UW1 340 aa13.1□□□□□ -0.31
CTNNB1-201ENST00000349496 VPS52Q8N1B4 723 aa13.1□□□□□ -0.31
CTNNB1-201ENST00000349496 PHKBQ93100 1093 aa13.1□□□□□ -0.31
CTNNB1-201ENST00000349496 TM6SF1Q9BZW5 370 aa13.1□□□□□ -0.31
CTNNB1-201ENST00000349496 EHD2Q9NZN4 543 aa13.1□□□□□ -0.31
CTNNB1-201ENST00000349496 SEPT10Q9P0V9 454 aa13.1□□□□□ -0.31
CTNNB1-201ENST00000349496 USP15Q9Y4E8 981 aaPredicted RBP13.1□□□□□ -0.31
CTNNB1-201ENST00000349496 PCDHA5Q9Y5H7 936 aa13.1□□□□□ -0.31
CTNNB1-201ENST00000349496 SEC24DO94855 1032 aaPredicted RBP13.1□□□□□ -0.31
CTNNB1-201ENST00000349496 TPBGLP0DKB5 382 aa13.1□□□□□ -0.31
CTNNB1-201ENST00000349496 IARSP41252 1262 aaKnown RBP13.1□□□□□ -0.31
CTNNB1-201ENST00000349496 GPSM2P81274 684 aa13.1□□□□□ -0.31
CTNNB1-201ENST00000349496 CAMK2BQ13554 666 aa13.1□□□□□ -0.31
CTNNB1-201ENST00000349496 COBLL1Q53SF7 1204 aa13.1□□□□□ -0.31
CTNNB1-201ENST00000349496 ENOX1Q8TC92 643 aaKnown RBP13.1□□□□□ -0.31
CTNNB1-201ENST00000349496 ANKRD36BP1Q96IX9 119 aa13.1□□□□□ -0.31
CTNNB1-201ENST00000349496 GID8Q9NWU2 228 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms