RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 ENC1O14682 589 aa11.87□□□□□ -0.51
SMARCE1-202ENST00000348513 CYP27B1O15528 508 aa11.87□□□□□ -0.51
SMARCE1-202ENST00000348513 MYBL2P10244 700 aa11.87□□□□□ -0.51
SMARCE1-202ENST00000348513 CTTNQ14247 550 aaKnown RBP11.87□□□□□ -0.51
SMARCE1-202ENST00000348513 DPCR1Q3MIW9 517 aa11.87□□□□□ -0.51
SMARCE1-202ENST00000348513 CEP78Q5JTW2 689 aa11.87□□□□□ -0.51
SMARCE1-202ENST00000348513 RIC8AQ9NPQ8 531 aa11.87□□□□□ -0.51
SMARCE1-202ENST00000348513 FGFR1OP2Q9NVK5 253 aa11.87□□□□□ -0.51
SMARCE1-202ENST00000348513 DDIT3P35638 169 aa11.86□□□□□ -0.51
SMARCE1-202ENST00000348513 RBM6P78332 1123 aaKnown RBP11.86□□□□□ -0.51
SMARCE1-202ENST00000348513 KIF23Q02241 960 aaPredicted RBP11.86□□□□□ -0.51
SMARCE1-202ENST00000348513 DAB2IPQ5VWQ8 1189 aa11.86□□□□□ -0.51
SMARCE1-202ENST00000348513 TTLL6Q8N841 843 aa11.86□□□□□ -0.51
SMARCE1-202ENST00000348513 ANKRD36BP1Q96IX9 119 aa11.86□□□□□ -0.51
SMARCE1-202ENST00000348513 OLFML3Q9NRN5 406 aa11.86□□□□□ -0.51
SMARCE1-202ENST00000348513 PCDHB6Q9Y5E3 794 aa11.86□□□□□ -0.51
SMARCE1-202ENST00000348513 H7C0C1 242 aa11.86□□□□□ -0.51
SMARCE1-202ENST00000348513 ZMYND10O75800 440 aa11.86□□□□□ -0.51
SMARCE1-202ENST00000348513 H2AFZP0C0S5 128 aa11.86□□□□□ -0.51
SMARCE1-202ENST00000348513 ACADSP16219 412 aa11.86□□□□□ -0.51
SMARCE1-202ENST00000348513 ATP5OP48047 213 aa11.86□□□□□ -0.51
SMARCE1-202ENST00000348513 MFAP3P55082 362 aa11.86□□□□□ -0.51
SMARCE1-202ENST00000348513 C2orf54Q08AI8 447 aa11.86□□□□□ -0.51
SMARCE1-202ENST00000348513 C11orf57Q6ZUT1 292 aaPredicted RBP11.86□□□□□ -0.51
SMARCE1-202ENST00000348513 H2AFVQ71UI9 128 aa11.86□□□□□ -0.51
SMARCE1-202ENST00000348513 TMC4Q7Z404 712 aa11.86□□□□□ -0.51
SMARCE1-202ENST00000348513 THAP11Q96EK4 314 aa11.86□□□□□ -0.51
SMARCE1-202ENST00000348513 NT5C1BQ96P26 610 aa11.86□□□□□ -0.51
SMARCE1-202ENST00000348513 CCSER2Q9H7U1 834 aa11.86□□□□□ -0.51
SMARCE1-202ENST00000348513 GOLGA8SH3BPF8 625 aa11.86□□□□□ -0.51
SMARCE1-202ENST00000348513 BFSP1Q12934 665 aa11.86□□□□□ -0.51
SMARCE1-202ENST00000348513 KPNB1Q14974 876 aaKnown RBP11.86□□□□□ -0.51
SMARCE1-202ENST00000348513 RFX6Q8HWS3 928 aa11.86□□□□□ -0.51
SMARCE1-202ENST00000348513 RETREG2Q8NC44 543 aa11.86□□□□□ -0.51
SMARCE1-202ENST00000348513 SCYL1Q96KG9 808 aa11.86□□□□□ -0.51
SMARCE1-202ENST00000348513 CYTH2Q99418 400 aa11.86□□□□□ -0.51
SMARCE1-202ENST00000348513 CPVLQ9H3G5 476 aa11.86□□□□□ -0.51
SMARCE1-202ENST00000348513 EMC3Q9P0I2 261 aa11.86□□□□□ -0.51
SMARCE1-202ENST00000348513 NXF1Q9UBU9 619 aaKnown RBP11.86□□□□□ -0.51
SMARCE1-202ENST00000348513 MAD1L1Q9Y6D9 718 aa11.86□□□□□ -0.51
SMARCE1-202ENST00000348513 ATP6V1G2O95670 118 aa11.86□□□□□ -0.51
SMARCE1-202ENST00000348513 ECEL1O95672 775 aa11.86□□□□□ -0.51
SMARCE1-202ENST00000348513 POTEIP0CG38 1075 aa11.86□□□□□ -0.51
SMARCE1-202ENST00000348513 TCP1P17987 556 aaKnown RBP11.86□□□□□ -0.51
SMARCE1-202ENST00000348513 GCLCP48506 637 aaPredicted RBP11.86□□□□□ -0.51
SMARCE1-202ENST00000348513 GUCY2DQ02846 1103 aa11.86□□□□□ -0.51
SMARCE1-202ENST00000348513 PTK2Q05397 1052 aa11.86□□□□□ -0.51
SMARCE1-202ENST00000348513 GLE1Q53GS7 698 aaKnown RBP11.86□□□□□ -0.51
SMARCE1-202ENST00000348513 EPHA10Q5JZY3 1008 aa11.86□□□□□ -0.51
SMARCE1-202ENST00000348513 NFRKBQ6P4R8 1299 aa11.86□□□□□ -0.51
SMARCE1-202ENST00000348513 SIRT2Q8IXJ6 389 aa11.86□□□□□ -0.51
SMARCE1-202ENST00000348513 NDE1Q9NXR1 346 aa11.86□□□□□ -0.51
SMARCE1-202ENST00000348513 ADD3Q9UEY8 706 aaKnown RBP11.86□□□□□ -0.51
SMARCE1-202ENST00000348513 AXIN2Q9Y2T1 843 aa11.86□□□□□ -0.51
SMARCE1-202ENST00000348513 PPP6R2O75170 966 aa11.85□□□□□ -0.51
SMARCE1-202ENST00000348513 GH2P01242 217 aa11.85□□□□□ -0.51
SMARCE1-202ENST00000348513 SRGAP2CP0DJJ0 459 aa11.85□□□□□ -0.51
SMARCE1-202ENST00000348513 PSMC2P35998 433 aaKnown RBP11.85□□□□□ -0.51
SMARCE1-202ENST00000348513 RBL2Q08999 1139 aa11.85□□□□□ -0.51
SMARCE1-202ENST00000348513 TSTA3Q13630 321 aaPredicted RBP11.85□□□□□ -0.51
SMARCE1-202ENST00000348513 THEMIS2Q5TEJ8 643 aa11.85□□□□□ -0.51
SMARCE1-202ENST00000348513 NXNQ6DKJ4 435 aa11.85□□□□□ -0.51
SMARCE1-202ENST00000348513 C7orf31Q8N865 590 aa11.85□□□□□ -0.51
SMARCE1-202ENST00000348513 SUN5Q8TC36 379 aa11.85□□□□□ -0.51
SMARCE1-202ENST00000348513 TRAPPC9Q96Q05 1148 aa11.85□□□□□ -0.51
SMARCE1-202ENST00000348513 NOVA2Q9UNW9 492 aaKnown RBP11.85□□□□□ -0.51
SMARCE1-202ENST00000348513 CLASP1Q7Z460 1538 aa11.85□□□□□ -0.51
SMARCE1-202ENST00000348513 ZBTB24O43167 697 aaPredicted RBP11.85□□□□□ -0.51
SMARCE1-202ENST00000348513 ZBTB7AO95365 584 aa11.85□□□□□ -0.51
SMARCE1-202ENST00000348513 SLC4A1P02730 911 aa11.85□□□□□ -0.51
SMARCE1-202ENST00000348513 ARMC3Q5W041 872 aa11.85□□□□□ -0.51
SMARCE1-202ENST00000348513 SMIM5Q71RC9 77 aa11.85□□□□□ -0.51
SMARCE1-202ENST00000348513 SKA2Q8WVK7 121 aaPredicted RBP11.85□□□□□ -0.51
SMARCE1-202ENST00000348513 FAM149B1Q96BN6 582 aa11.85□□□□□ -0.51
SMARCE1-202ENST00000348513 MASTLQ96GX5 879 aa11.85□□□□□ -0.51
SMARCE1-202ENST00000348513 ACCSQ96QU6 501 aa11.85□□□□□ -0.51
SMARCE1-202ENST00000348513 TMEM60Q9H2L4 133 aa11.85□□□□□ -0.51
SMARCE1-202ENST00000348513 LRFN2Q9ULH4 789 aa11.85□□□□□ -0.51
SMARCE1-202ENST00000348513 SPATA31E1Q6ZUB1 1445 aa11.85□□□□□ -0.51
SMARCE1-202ENST00000348513 A6NJR5 290 aa11.85□□□□□ -0.51
SMARCE1-202ENST00000348513 GOLGA8JA6NMD2 632 aa11.85□□□□□ -0.51
SMARCE1-202ENST00000348513 SFI1A8K8P3 1242 aa11.85□□□□□ -0.51
SMARCE1-202ENST00000348513 TRIM16LQ309B1 348 aa11.85□□□□□ -0.51
SMARCE1-202ENST00000348513 GRAMD1BQ3KR37 738 aa11.85□□□□□ -0.51
SMARCE1-202ENST00000348513 TBC1D9BQ66K14 1250 aa11.85□□□□□ -0.51
SMARCE1-202ENST00000348513 SCARA5Q6ZMJ2 495 aa11.85□□□□□ -0.51
SMARCE1-202ENST00000348513 DHX36Q9H2U1 1008 aaKnown RBP11.85□□□□□ -0.51
SMARCE1-202ENST00000348513 HAUS4Q9H6D7 363 aa11.85□□□□□ -0.51
SMARCE1-202ENST00000348513 MAN1B1Q9UKM7 699 aa11.85□□□□□ -0.51
SMARCE1-202ENST00000348513 POTEB3A0JP26 581 aa11.85□□□□□ -0.51
SMARCE1-202ENST00000348513 XPOTO43592 962 aaKnown RBP11.85□□□□□ -0.51
SMARCE1-202ENST00000348513 CD58P19256 250 aa11.85□□□□□ -0.51
SMARCE1-202ENST00000348513 AOC3Q16853 763 aa11.85□□□□□ -0.51
SMARCE1-202ENST00000348513 POTEBQ6S5H4 581 aa11.85□□□□□ -0.51
SMARCE1-202ENST00000348513 PATL1Q86TB9 770 aaKnown RBP11.85□□□□□ -0.51
SMARCE1-202ENST00000348513 NOP9Q86U38 636 aaKnown RBP11.85□□□□□ -0.51
SMARCE1-202ENST00000348513 HORMAD1Q86X24 394 aa11.85□□□□□ -0.51
SMARCE1-202ENST00000348513 TRMT2AQ8IZ69 625 aaKnown RBP11.85□□□□□ -0.51
SMARCE1-202ENST00000348513 ICA1LQ8NDH6 482 aa11.85□□□□□ -0.51
SMARCE1-202ENST00000348513 P2RX5Q93086 422 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms