RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 PTK2Q05397 1052 aa15.88■□□□□ 0.13
NUP50-201ENST00000347635 TTI2Q6NXR4 508 aa15.88■□□□□ 0.13
NUP50-201ENST00000347635 COL23A1Q86Y22 540 aaPredicted RBP15.88■□□□□ 0.13
NUP50-201ENST00000347635 CCT8L2Q96SF2 557 aa15.88■□□□□ 0.13
NUP50-201ENST00000347635 SERPINA10Q9UK55 444 aa15.88■□□□□ 0.13
NUP50-201ENST00000347635 ZNF148Q9UQR1 794 aa15.88■□□□□ 0.13
NUP50-201ENST00000347635 DAPK3O43293 454 aa15.88■□□□□ 0.13
NUP50-201ENST00000347635 LSP1P33241 339 aa15.88■□□□□ 0.13
NUP50-201ENST00000347635 CARSP49589 748 aaKnown RBP15.88■□□□□ 0.13
NUP50-201ENST00000347635 TBC1D1Q86TI0 1168 aaPredicted RBP15.88■□□□□ 0.13
NUP50-201ENST00000347635 GDAP1Q8TB36 358 aa15.88■□□□□ 0.13
NUP50-201ENST00000347635 RSAD2Q8WXG1 361 aa15.88■□□□□ 0.13
NUP50-201ENST00000347635 AMACRQ9UHK6 382 aa15.88■□□□□ 0.13
NUP50-201ENST00000347635 NBPF9Q3BBW0 867 aa15.88■□□□□ 0.13
NUP50-201ENST00000347635 CHMP6Q96FZ7 201 aa15.88■□□□□ 0.13
NUP50-201ENST00000347635 MTFR1LQ9H019 292 aa15.88■□□□□ 0.13
NUP50-201ENST00000347635 KLC4Q9NSK0 619 aa15.88■□□□□ 0.13
NUP50-201ENST00000347635 TRPC6Q9Y210 931 aa15.88■□□□□ 0.13
NUP50-201ENST00000347635 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.88■□□□□ 0.13
NUP50-201ENST00000347635 PRLRP16471 622 aa15.88■□□□□ 0.13
NUP50-201ENST00000347635 RWDD2BP57060 319 aa15.88■□□□□ 0.13
NUP50-201ENST00000347635 LGSNQ5TDP6 509 aa15.88■□□□□ 0.13
NUP50-201ENST00000347635 AGBL3Q8NEM8 1001 aa15.88■□□□□ 0.13
NUP50-201ENST00000347635 CPSF2Q9P2I0 782 aaKnown RBP15.88■□□□□ 0.13
NUP50-201ENST00000347635 POC1B-GALNT4F8VUJ3 575 aa15.87■□□□□ 0.13
NUP50-201ENST00000347635 STAT3P40763 770 aa15.87■□□□□ 0.13
NUP50-201ENST00000347635 YWHAEP62258 255 aaKnown RBP15.87■□□□□ 0.13
NUP50-201ENST00000347635 TMED2Q15363 201 aa15.87■□□□□ 0.13
NUP50-201ENST00000347635 CFAP157Q5JU67 520 aa15.87■□□□□ 0.13
NUP50-201ENST00000347635 PARP9Q8IXQ6 854 aa15.87■□□□□ 0.13
NUP50-201ENST00000347635 MAD2L2Q9UI95 211 aa15.87■□□□□ 0.13
NUP50-201ENST00000347635 ABCB11O95342 1321 aa15.87■□□□□ 0.13
NUP50-201ENST00000347635 HOXA13P31271 388 aaPredicted RBP15.87■□□□□ 0.13
NUP50-201ENST00000347635 LIG4P49917 911 aa15.87■□□□□ 0.13
NUP50-201ENST00000347635 MXI1P50539 228 aa15.87■□□□□ 0.13
NUP50-201ENST00000347635 FIGNQ5HY92 759 aa15.87■□□□□ 0.13
NUP50-201ENST00000347635 EARS2Q5JPH6 523 aaKnown RBP15.87■□□□□ 0.13
NUP50-201ENST00000347635 KAZNQ674X7 775 aa15.87■□□□□ 0.13
NUP50-201ENST00000347635 MIS18BP1Q6P0N0 1132 aa15.87■□□□□ 0.13
NUP50-201ENST00000347635 FAM187AA6NFU0 413 aa15.87■□□□□ 0.13
NUP50-201ENST00000347635 RAD51CO43502 376 aa15.87■□□□□ 0.13
NUP50-201ENST00000347635 BPIFB4P59827 614 aa15.87■□□□□ 0.13
NUP50-201ENST00000347635 LLGL1Q15334 1064 aa15.87■□□□□ 0.13
NUP50-201ENST00000347635 SYN2Q92777 582 aaPredicted RBP15.87■□□□□ 0.13
NUP50-201ENST00000347635 TBK1Q9UHD2 729 aa15.87■□□□□ 0.13
NUP50-201ENST00000347635 NPHP3-ACAD11A0A0J9YXS1 232 aa15.87■□□□□ 0.13
NUP50-201ENST00000347635 ECM2O94769 699 aaPredicted RBP15.87■□□□□ 0.13
NUP50-201ENST00000347635 ACSL3O95573 720 aa15.87■□□□□ 0.13
NUP50-201ENST00000347635 ZNF211Q13398 564 aaPredicted RBP15.87■□□□□ 0.13
NUP50-201ENST00000347635 RPAINQ86UA6 219 aa15.87■□□□□ 0.13
NUP50-201ENST00000347635 PIGOQ8TEQ8 1089 aa15.87■□□□□ 0.13
NUP50-201ENST00000347635 POMGNT1Q8WZA1 660 aa15.87■□□□□ 0.13
NUP50-201ENST00000347635 WRNIP1Q96S55 665 aa15.87■□□□□ 0.13
NUP50-201ENST00000347635 LACRTQ9GZZ8 138 aa15.87■□□□□ 0.13
NUP50-201ENST00000347635 NBPF3Q9H094 633 aa15.87■□□□□ 0.13
NUP50-201ENST00000347635 GINM1Q9NU53 330 aa15.87■□□□□ 0.13
NUP50-201ENST00000347635 KBTBD4Q9NVX7 518 aa15.87■□□□□ 0.13
NUP50-201ENST00000347635 CAPN6Q9Y6Q1 641 aa15.87■□□□□ 0.13
NUP50-201ENST00000347635 SNAP25P60880 206 aa15.86■□□□□ 0.13
NUP50-201ENST00000347635 TFDP1Q14186 410 aa15.86■□□□□ 0.13
NUP50-201ENST00000347635 RNF207Q6ZRF8 634 aa15.86■□□□□ 0.13
NUP50-201ENST00000347635 CCHCR1Q8TD31 782 aa15.86■□□□□ 0.13
NUP50-201ENST00000347635 FBXO41Q8TF61 875 aa15.86■□□□□ 0.13
NUP50-201ENST00000347635 TXLNGQ9NUQ3 528 aa15.86■□□□□ 0.13
NUP50-201ENST00000347635 EHD2Q9NZN4 543 aa15.86■□□□□ 0.13
NUP50-201ENST00000347635 CCDC160A6NGH7 325 aa15.86■□□□□ 0.13
NUP50-201ENST00000347635 CACNB3P54284 484 aa15.86■□□□□ 0.13
NUP50-201ENST00000347635 BFSP1Q12934 665 aa15.86■□□□□ 0.13
NUP50-201ENST00000347635 TRIP13Q15645 432 aaPredicted RBP15.86■□□□□ 0.13
NUP50-201ENST00000347635 NUGGCQ68CJ6 796 aa15.86■□□□□ 0.13
NUP50-201ENST00000347635 RFFLQ8WZ73 363 aa15.86■□□□□ 0.13
NUP50-201ENST00000347635 ITIH3Q06033 890 aa15.86■□□□□ 0.13
NUP50-201ENST00000347635 DRAP1Q14919 205 aaPredicted RBP15.86■□□□□ 0.13
NUP50-201ENST00000347635 SMIM5Q71RC9 77 aa15.86■□□□□ 0.13
NUP50-201ENST00000347635 GBP7Q8N8V2 638 aaPredicted RBP15.86■□□□□ 0.13
NUP50-201ENST00000347635 USP38Q8NB14 1042 aa15.86■□□□□ 0.13
NUP50-201ENST00000347635 RIOK1Q9BRS2 568 aaKnown RBP15.86■□□□□ 0.13
NUP50-201ENST00000347635 CHRNA3P32297 505 aa15.86■□□□□ 0.13
NUP50-201ENST00000347635 GPC5P78333 572 aa15.86■□□□□ 0.13
NUP50-201ENST00000347635 FAM20AQ96MK3 541 aa15.86■□□□□ 0.13
NUP50-201ENST00000347635 P4HA1P13674 534 aa15.85■□□□□ 0.13
NUP50-201ENST00000347635 ARHGAP4P98171 946 aa15.85■□□□□ 0.13
NUP50-201ENST00000347635 ALCAMQ13740 583 aa15.85■□□□□ 0.13
NUP50-201ENST00000347635 CYP4F22Q6NT55 531 aa15.85■□□□□ 0.13
NUP50-201ENST00000347635 SH3RF1Q7Z6J0 888 aa15.85■□□□□ 0.13
NUP50-201ENST00000347635 RNPC3Q96LT9 517 aaKnown RBP15.85■□□□□ 0.13
NUP50-201ENST00000347635 DPEP1P16444 411 aa15.85■□□□□ 0.13
NUP50-201ENST00000347635 ANXA13P27216 316 aa15.85■□□□□ 0.13
NUP50-201ENST00000347635 SOX5P35711 763 aa15.85■□□□□ 0.13
NUP50-201ENST00000347635 PIK3CAP42336 1068 aa15.85■□□□□ 0.13
NUP50-201ENST00000347635 FXR2P51116 673 aaKnown RBP eCLIP15.85■□□□□ 0.13
NUP50-201ENST00000347635 GLYCTKQ8IVS8 523 aa15.85■□□□□ 0.13
NUP50-201ENST00000347635 CD19P15391 556 aa15.85■□□□□ 0.13
NUP50-201ENST00000347635 PPP4CP60510 307 aa15.85■□□□□ 0.13
NUP50-201ENST00000347635 DHX34Q14147 1143 aaKnown RBP15.85■□□□□ 0.13
NUP50-201ENST00000347635 CFAP57Q96MR6 1250 aa15.85■□□□□ 0.13
NUP50-201ENST00000347635 INTS2Q9H0H0 1204 aaKnown RBP15.85■□□□□ 0.13
NUP50-201ENST00000347635 PDXKO00764 312 aa15.85■□□□□ 0.13
NUP50-201ENST00000347635 USP11P51784 963 aa15.85■□□□□ 0.13
NUP50-201ENST00000347635 PMS1P54277 932 aaKnown RBP15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms