RNA–Protein interactions for RNA: ENST00000346162.10

SRPK1-201, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 4,762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-201ENST00000346162 PCDHA8Q9Y5H6 950 aa16.63■□□□□ 0.25
SRPK1-201ENST00000346162 NTSR2O95665 410 aa16.63■□□□□ 0.25
SRPK1-201ENST00000346162 TMOD1P28289 359 aa16.63■□□□□ 0.25
SRPK1-201ENST00000346162 GRM1Q13255 1194 aa16.63■□□□□ 0.25
SRPK1-201ENST00000346162 DCTN3O75935 186 aa16.62■□□□□ 0.25
SRPK1-201ENST00000346162 ADCY8P40145 1251 aa16.62■□□□□ 0.25
SRPK1-201ENST00000346162 BRDTQ58F21 947 aaPredicted RBP16.62■□□□□ 0.25
SRPK1-201ENST00000346162 ARMCX6Q7L4S7 300 aa16.62■□□□□ 0.25
SRPK1-201ENST00000346162 TC2NQ8N9U0 490 aa16.62■□□□□ 0.25
SRPK1-201ENST00000346162 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.62■□□□□ 0.25
SRPK1-201ENST00000346162 ADGRB2O60241 1585 aa16.62■□□□□ 0.25
SRPK1-201ENST00000346162 TTC36A6NLP5 189 aa16.62■□□□□ 0.25
SRPK1-201ENST00000346162 E9PMD0 336 aa16.62■□□□□ 0.25
SRPK1-201ENST00000346162 ZNF185O15231 689 aa16.62■□□□□ 0.25
SRPK1-201ENST00000346162 WDR93Q6P2C0 686 aa16.62■□□□□ 0.25
SRPK1-201ENST00000346162 FAM160B2Q86V87 743 aa16.62■□□□□ 0.25
SRPK1-201ENST00000346162 LRRC43Q8N309 656 aa16.62■□□□□ 0.25
SRPK1-201ENST00000346162 TRIML2Q8N7C3 387 aa16.62■□□□□ 0.25
SRPK1-201ENST00000346162 MARCH10Q8NA82 808 aaPredicted RBP16.62■□□□□ 0.25
SRPK1-201ENST00000346162 SLC17A8Q8NDX2 589 aa16.62■□□□□ 0.25
SRPK1-201ENST00000346162 RAD54LQ92698 747 aa16.62■□□□□ 0.25
SRPK1-201ENST00000346162 LRRC37BQ96QE4 947 aa16.62■□□□□ 0.25
SRPK1-201ENST00000346162 TAF1DQ9H5J8 278 aaPredicted RBP16.62■□□□□ 0.25
SRPK1-201ENST00000346162 TDRD3Q9H7E2 651 aaKnown RBP16.62■□□□□ 0.25
SRPK1-201ENST00000346162 ITSN1Q15811 1721 aa16.62■□□□□ 0.25
SRPK1-201ENST00000346162 SFI1A8K8P3 1242 aa16.62■□□□□ 0.25
SRPK1-201ENST00000346162 DNAJC6O75061 913 aa16.62■□□□□ 0.25
SRPK1-201ENST00000346162 PSMD7P51665 324 aa16.62■□□□□ 0.25
SRPK1-201ENST00000346162 CCDC14Q49A88 953 aa16.62■□□□□ 0.25
SRPK1-201ENST00000346162 SBK1Q52WX2 424 aa16.62■□□□□ 0.25
SRPK1-201ENST00000346162 PROM2Q8N271 834 aa16.62■□□□□ 0.25
SRPK1-201ENST00000346162 KIF2BQ8N4N8 673 aa16.62■□□□□ 0.25
SRPK1-201ENST00000346162 MLXIPLQ9NP71 852 aa16.62■□□□□ 0.25
SRPK1-201ENST00000346162 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.62■□□□□ 0.25
SRPK1-201ENST00000346162 TDP2O95551 362 aa16.62■□□□□ 0.25
SRPK1-201ENST00000346162 FMR1Q06787 632 aaKnown RBP eCLIP16.62■□□□□ 0.25
SRPK1-201ENST00000346162 RAD9BQ6WBX8 426 aa16.62■□□□□ 0.25
SRPK1-201ENST00000346162 CCDC89Q8N998 374 aa16.62■□□□□ 0.25
SRPK1-201ENST00000346162 CEP170P1Q96L14 293 aa16.62■□□□□ 0.25
SRPK1-201ENST00000346162 ANKFY1Q9P2R3 1169 aa16.62■□□□□ 0.25
SRPK1-201ENST00000346162 SCTRP47872 440 aa16.61■□□□□ 0.25
SRPK1-201ENST00000346162 BPIFB4P59827 614 aa16.61■□□□□ 0.25
SRPK1-201ENST00000346162 ARHGAP4P98171 946 aa16.61■□□□□ 0.25
SRPK1-201ENST00000346162 C10orf76Q5T2E6 689 aa16.61■□□□□ 0.25
SRPK1-201ENST00000346162 TRPM8Q7Z2W7 1104 aa16.61■□□□□ 0.25
SRPK1-201ENST00000346162 BBOF1Q8ND07 529 aa16.61■□□□□ 0.25
SRPK1-201ENST00000346162 PIGOQ8TEQ8 1089 aa16.61■□□□□ 0.25
SRPK1-201ENST00000346162 SEPT9Q9UHD8 586 aaPredicted RBP16.61■□□□□ 0.25
SRPK1-201ENST00000346162 PPP1R18Q6NYC8 613 aa16.61■□□□□ 0.25
SRPK1-201ENST00000346162 KMT5AQ9NQR1 393 aa16.61■□□□□ 0.25
SRPK1-201ENST00000346162 NRBP2Q9NSY0 501 aa16.61■□□□□ 0.25
SRPK1-201ENST00000346162 RAB20Q9NX57 234 aa16.61■□□□□ 0.25
SRPK1-201ENST00000346162 POC1B-GALNT4F8VUJ3 575 aa16.61■□□□□ 0.25
SRPK1-201ENST00000346162 CCDC188H7C350 402 aa16.61■□□□□ 0.25
SRPK1-201ENST00000346162 MXI1P50539 228 aa16.61■□□□□ 0.25
SRPK1-201ENST00000346162 TSC22D4Q9Y3Q8 395 aa16.61■□□□□ 0.25
SRPK1-201ENST00000346162 AKR1B1P15121 316 aa16.61■□□□□ 0.25
SRPK1-201ENST00000346162 ATF7P17544 494 aaPredicted RBP16.61■□□□□ 0.25
SRPK1-201ENST00000346162 SERPINB3P29508 390 aa16.61■□□□□ 0.25
SRPK1-201ENST00000346162 RASGRP2Q7LDG7 609 aa16.61■□□□□ 0.25
SRPK1-201ENST00000346162 GUF1Q8N442 669 aaKnown RBP16.61■□□□□ 0.25
SRPK1-201ENST00000346162 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.61■□□□□ 0.25
SRPK1-201ENST00000346162 SLC7A3Q8WY07 619 aa16.61■□□□□ 0.25
SRPK1-201ENST00000346162 USP6NLQ92738 828 aa16.61■□□□□ 0.25
SRPK1-201ENST00000346162 POTEB3A0JP26 581 aa16.6■□□□□ 0.25
SRPK1-201ENST00000346162 POTECB2RU33 542 aa16.6■□□□□ 0.25
SRPK1-201ENST00000346162 P4HA1P13674 534 aa16.6■□□□□ 0.25
SRPK1-201ENST00000346162 ITPK1Q13572 414 aa16.6■□□□□ 0.25
SRPK1-201ENST00000346162 QRICH1Q2TAL8 776 aa16.6■□□□□ 0.25
SRPK1-201ENST00000346162 POTEBQ6S5H4 581 aa16.6■□□□□ 0.25
SRPK1-201ENST00000346162 CCSER1Q9C0I3 900 aa16.6■□□□□ 0.25
SRPK1-201ENST00000346162 PTPN22Q9Y2R2 807 aa16.6■□□□□ 0.25
SRPK1-201ENST00000346162 TMEM191BP0C7N4 346 aa16.6■□□□□ 0.25
SRPK1-201ENST00000346162 TMED10P49755 219 aaKnown RBP16.6■□□□□ 0.25
SRPK1-201ENST00000346162 ZNF653Q96CK0 615 aa16.6■□□□□ 0.25
SRPK1-201ENST00000346162 COASYQ13057 564 aa16.6■□□□□ 0.25
SRPK1-201ENST00000346162 SEMA3FQ13275 785 aa16.6■□□□□ 0.25
SRPK1-201ENST00000346162 SFR1Q86XK3 245 aa16.6■□□□□ 0.25
SRPK1-201ENST00000346162 ANKZF1Q9H8Y5 726 aa16.6■□□□□ 0.25
SRPK1-201ENST00000346162 UBE2TQ9NPD8 197 aaPredicted RBP16.6■□□□□ 0.25
SRPK1-201ENST00000346162 ANLNQ9NQW6 1124 aa16.6■□□□□ 0.25
SRPK1-201ENST00000346162 EIF2AK2P19525 551 aaKnown RBP16.6■□□□□ 0.25
SRPK1-201ENST00000346162 LRRC14Q15048 493 aa16.6■□□□□ 0.25
SRPK1-201ENST00000346162 NCAPG2Q86XI2 1143 aa16.6■□□□□ 0.25
SRPK1-201ENST00000346162 ADGRF4Q8IZF3 695 aa16.6■□□□□ 0.25
SRPK1-201ENST00000346162 ARL8AQ96BM9 186 aa16.6■□□□□ 0.25
SRPK1-201ENST00000346162 LBHD1Q9BQE6 289 aaPredicted RBP16.6■□□□□ 0.25
SRPK1-201ENST00000346162 ARHGAP10A1A4S6 786 aa16.59■□□□□ 0.25
SRPK1-201ENST00000346162 LRRC53A6NM62 1247 aa16.59■□□□□ 0.25
SRPK1-201ENST00000346162 F5H6K3 240 aa16.59■□□□□ 0.25
SRPK1-201ENST00000346162 NVLO15381 856 aaKnown RBP16.59■□□□□ 0.25
SRPK1-201ENST00000346162 SART1O43290 800 aaKnown RBP16.59■□□□□ 0.25
SRPK1-201ENST00000346162 TNNC2P02585 160 aa16.59■□□□□ 0.25
SRPK1-201ENST00000346162 HSPA6P17066 643 aa16.59■□□□□ 0.25
SRPK1-201ENST00000346162 KLRC3Q07444 240 aa16.59■□□□□ 0.25
SRPK1-201ENST00000346162 PRPF31Q8WWY3 499 aaKnown RBP16.59■□□□□ 0.25
SRPK1-201ENST00000346162 FAM20AQ96MK3 541 aa16.59■□□□□ 0.25
SRPK1-201ENST00000346162 TTC1Q99614 292 aa16.59■□□□□ 0.25
SRPK1-201ENST00000346162 RPS6KA5O75582 802 aa16.59■□□□□ 0.25
SRPK1-201ENST00000346162 ASNSP08243 561 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms