RNA–Protein interactions for RNA: ENST00000344576.6

EGFR-203, Transcript of epidermal growth factor receptor, humanhuman

TSL 1 (best) BASIC

Gene EGFR, Length 2,864 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EGFR-203ENST00000344576 KIF1CO43896 1103 aaKnown RBP17.47■□□□□ 0.39
EGFR-203ENST00000344576 MGRN1O60291 552 aa17.47■□□□□ 0.39
EGFR-203ENST00000344576 ATP6V1G2O95670 118 aa17.47■□□□□ 0.39
EGFR-203ENST00000344576 ERMARDQ5T6L9 678 aa17.47■□□□□ 0.39
EGFR-203ENST00000344576 TLCD1Q96CP7 247 aa17.47■□□□□ 0.39
EGFR-203ENST00000344576 CALR3Q96L12 384 aaKnown RBP17.47■□□□□ 0.39
EGFR-203ENST00000344576 FAM129AQ9BZQ8 928 aa17.47■□□□□ 0.39
EGFR-203ENST00000344576 EPB41L4BQ9H329 900 aa17.47■□□□□ 0.39
EGFR-203ENST00000344576 NOD2Q9HC29 1040 aa17.47■□□□□ 0.39
EGFR-203ENST00000344576 FGGP02679 453 aa17.47■□□□□ 0.39
EGFR-203ENST00000344576 EZRP15311 586 aaKnown RBP17.47■□□□□ 0.39
EGFR-203ENST00000344576 CLNS1AP54105 237 aaKnown RBP17.47■□□□□ 0.39
EGFR-203ENST00000344576 PRPF4BQ13523 1007 aaKnown RBP17.47■□□□□ 0.39
EGFR-203ENST00000344576 ARHGAP27Q6ZUM4 889 aa17.47■□□□□ 0.39
EGFR-203ENST00000344576 TCP11Q8WWU5 503 aa17.47■□□□□ 0.39
EGFR-203ENST00000344576 CEP63Q96MT8 703 aa17.47■□□□□ 0.39
EGFR-203ENST00000344576 ERVK-5Q9HDB9 667 aa17.47■□□□□ 0.39
EGFR-203ENST00000344576 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.47■□□□□ 0.39
EGFR-203ENST00000344576 KIAA1024Q9UPX6 916 aa17.47■□□□□ 0.39
EGFR-203ENST00000344576 STXBP5LQ9Y2K9 1186 aa17.47■□□□□ 0.39
EGFR-203ENST00000344576 POTEB3A0JP26 581 aa17.46■□□□□ 0.39
EGFR-203ENST00000344576 POTECB2RU33 542 aa17.46■□□□□ 0.39
EGFR-203ENST00000344576 NR2F2P24468 414 aa17.46■□□□□ 0.39
EGFR-203ENST00000344576 TLDC1Q6P9B6 456 aa17.46■□□□□ 0.39
EGFR-203ENST00000344576 POTEBQ6S5H4 581 aa17.46■□□□□ 0.39
EGFR-203ENST00000344576 NT5DC3Q86UY8 548 aa17.46■□□□□ 0.39
EGFR-203ENST00000344576 GLG1Q92896 1179 aa17.46■□□□□ 0.39
EGFR-203ENST00000344576 STAMBPL1Q96FJ0 436 aa17.46■□□□□ 0.39
EGFR-203ENST00000344576 LZTS2Q9BRK4 669 aa17.46■□□□□ 0.39
EGFR-203ENST00000344576 BCAS3Q9H6U6 928 aa17.46■□□□□ 0.39
EGFR-203ENST00000344576 EMILIN3Q9NT22 766 aa17.46■□□□□ 0.39
EGFR-203ENST00000344576 KIF13BQ9NQT8 1826 aa17.46■□□□□ 0.39
EGFR-203ENST00000344576 PLIN4Q96Q06 1357 aa17.46■□□□□ 0.39
EGFR-203ENST00000344576 CCT8L1PA6NM43 557 aa17.46■□□□□ 0.39
EGFR-203ENST00000344576 BTNL10A8MVZ5 291 aa17.46■□□□□ 0.39
EGFR-203ENST00000344576 DNAJC8O75937 253 aaPredicted RBP17.46■□□□□ 0.39
EGFR-203ENST00000344576 TTLL1O95922 423 aa17.46■□□□□ 0.39
EGFR-203ENST00000344576 MMEP08473 750 aa17.46■□□□□ 0.39
EGFR-203ENST00000344576 GCFC2P16383 781 aaKnown RBP17.46■□□□□ 0.39
EGFR-203ENST00000344576 FAM133BQ5BKY9 247 aaKnown RBP17.46■□□□□ 0.39
EGFR-203ENST00000344576 DCAF17Q5H9S7 520 aaPredicted RBP17.46■□□□□ 0.39
EGFR-203ENST00000344576 DCAF12L1Q5VU92 463 aa17.46■□□□□ 0.39
EGFR-203ENST00000344576 GPBP1Q86WP2 473 aa17.46■□□□□ 0.39
EGFR-203ENST00000344576 U2AF1L4Q8WU68 220 aaKnown RBP17.46■□□□□ 0.39
EGFR-203ENST00000344576 FMO2Q99518 471 aa17.46■□□□□ 0.39
EGFR-203ENST00000344576 SERPINA10Q9UK55 444 aa17.46■□□□□ 0.39
EGFR-203ENST00000344576 ARFGEF1Q9Y6D6 1849 aa17.46■□□□□ 0.38
EGFR-203ENST00000344576 CCDC188H7C350 402 aa17.46■□□□□ 0.38
EGFR-203ENST00000344576 SKAP2O75563 359 aaPredicted RBP17.46■□□□□ 0.38
EGFR-203ENST00000344576 TAL1P17542 331 aaPredicted RBP17.46■□□□□ 0.38
EGFR-203ENST00000344576 IFI35P80217 286 aaPredicted RBP17.46■□□□□ 0.38
EGFR-203ENST00000344576 POU5F1Q01860 360 aaKnown RBP17.46■□□□□ 0.38
EGFR-203ENST00000344576 ZNF211Q13398 564 aaPredicted RBP17.46■□□□□ 0.38
EGFR-203ENST00000344576 RRP1BQ14684 758 aaKnown RBP17.46■□□□□ 0.38
EGFR-203ENST00000344576 SEPT2Q15019 361 aa17.46■□□□□ 0.38
EGFR-203ENST00000344576 LRRC34Q8IZ02 419 aa17.46■□□□□ 0.38
EGFR-203ENST00000344576 CCDC197Q8NCU1 140 aa17.46■□□□□ 0.38
EGFR-203ENST00000344576 ZNF317Q96PQ6 595 aaPredicted RBP17.46■□□□□ 0.38
EGFR-203ENST00000344576 TACO1Q9BSH4 297 aaKnown RBP17.46■□□□□ 0.38
EGFR-203ENST00000344576 RAB34Q9BZG1 259 aa17.46■□□□□ 0.38
EGFR-203ENST00000344576 ADAM7Q9H2U9 754 aa17.46■□□□□ 0.38
EGFR-203ENST00000344576 L3MBTL1Q9Y468 752 aa17.46■□□□□ 0.38
EGFR-203ENST00000344576 SPDYE3A6NKU9 549 aa17.45■□□□□ 0.38
EGFR-203ENST00000344576 CLTAP09496 248 aa17.45■□□□□ 0.38
EGFR-203ENST00000344576 PON1P27169 355 aa17.45■□□□□ 0.38
EGFR-203ENST00000344576 ADCY7P51828 1080 aa17.45■□□□□ 0.38
EGFR-203ENST00000344576 MRPL12P52815 198 aaKnown RBP17.45■□□□□ 0.38
EGFR-203ENST00000344576 MARSP56192 900 aaKnown RBP17.45■□□□□ 0.38
EGFR-203ENST00000344576 PDIA5Q14554 519 aa17.45■□□□□ 0.38
EGFR-203ENST00000344576 TBC1D1Q86TI0 1168 aaPredicted RBP17.45■□□□□ 0.38
EGFR-203ENST00000344576 RASGEF1CQ8N431 466 aa17.45■□□□□ 0.38
EGFR-203ENST00000344576 KDM4CQ9H3R0 1056 aa17.45■□□□□ 0.38
EGFR-203ENST00000344576 UTP11Q9Y3A2 253 aaKnown RBP17.45■□□□□ 0.38
EGFR-203ENST00000344576 IGSF9BQ9UPX0 1349 aa17.45■□□□□ 0.38
EGFR-203ENST00000344576 DDX3XO00571 662 aaKnown RBP eCLIP17.45■□□□□ 0.389e-8■■■■□ 23.8
EGFR-203ENST00000344576 IFNAR2P48551 515 aa17.45■□□□□ 0.38
EGFR-203ENST00000344576 SNAP25P60880 206 aa17.45■□□□□ 0.38
EGFR-203ENST00000344576 AADACL2Q6P093 401 aa17.45■□□□□ 0.38
EGFR-203ENST00000344576 PNMA8AQ86V59 439 aaPredicted RBP17.45■□□□□ 0.38
EGFR-203ENST00000344576 AZI2Q9H6S1 392 aa17.45■□□□□ 0.38
EGFR-203ENST00000344576 SWAP70Q9UH65 585 aa17.45■□□□□ 0.38
EGFR-203ENST00000344576 MARCH6O60337 910 aa17.44■□□□□ 0.38
EGFR-203ENST00000344576 STAT3P40763 770 aa17.44■□□□□ 0.38
EGFR-203ENST00000344576 NOVP48745 357 aa17.44■□□□□ 0.38
EGFR-203ENST00000344576 R3HDM1Q15032 1099 aaKnown RBP17.44■□□□□ 0.38
EGFR-203ENST00000344576 CERKLQ49MI3 558 aaPredicted RBP17.44■□□□□ 0.38
EGFR-203ENST00000344576 TCERG1LQ5VWI1 586 aa17.44■□□□□ 0.38
EGFR-203ENST00000344576 SUPT20HQ8NEM7 779 aa17.44■□□□□ 0.38
EGFR-203ENST00000344576 CCDC26Q8TAB7 109 aa17.44■□□□□ 0.38
EGFR-203ENST00000344576 ATXN2LQ8WWM7 1075 aaKnown RBP17.44■□□□□ 0.38
EGFR-203ENST00000344576 SEC14L1Q92503 715 aa17.44■□□□□ 0.38
EGFR-203ENST00000344576 RNF25Q96BH1 459 aaPredicted RBP17.44■□□□□ 0.38
EGFR-203ENST00000344576 FAXDC2Q96IV6 333 aa17.44■□□□□ 0.38
EGFR-203ENST00000344576 ELAC2Q9BQ52 826 aaKnown RBP17.44■□□□□ 0.38
EGFR-203ENST00000344576 TXLNGYQ9BZA5 131 aa17.44■□□□□ 0.38
EGFR-203ENST00000344576 SLITRK6Q9H5Y7 841 aa17.44■□□□□ 0.38
EGFR-203ENST00000344576 SLC24A3Q9HC58 644 aa17.44■□□□□ 0.38
EGFR-203ENST00000344576 DDX25Q9UHL0 483 aaKnown RBP17.44■□□□□ 0.38
EGFR-203ENST00000344576 PPP1R9AQ9ULJ8 1098 aa17.44■□□□□ 0.38
EGFR-203ENST00000344576 PPFIA2O75334 1257 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms