RNA–Protein interactions for RNA: ENST00000343139.9

HLA-DQA1-201, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-201ENST00000343139 F13A1P00488 732 aa14.56□□□□□ -0.08
HLA-DQA1-201ENST00000343139 SLC39A14Q15043 492 aa14.56□□□□□ -0.08
HLA-DQA1-201ENST00000343139 ECM1Q16610 540 aa14.56□□□□□ -0.08
HLA-DQA1-201ENST00000343139 PRPF31Q8WWY3 499 aaKnown RBP14.56□□□□□ -0.08
HLA-DQA1-201ENST00000343139 NLRP7Q8WX94 980 aa14.56□□□□□ -0.08
HLA-DQA1-201ENST00000343139 ZNF396Q96N95 335 aaPredicted RBP14.56□□□□□ -0.08
HLA-DQA1-201ENST00000343139 NFKBIZQ9BYH8 718 aa14.56□□□□□ -0.08
HLA-DQA1-201ENST00000343139 GCOM2Q9BZD3 368 aaPredicted RBP14.56□□□□□ -0.08
HLA-DQA1-201ENST00000343139 RNF216Q9NWF9 866 aaPredicted RBP14.56□□□□□ -0.08
HLA-DQA1-201ENST00000343139 ST3GAL5Q9UNP4 418 aa14.56□□□□□ -0.08
HLA-DQA1-201ENST00000343139 KIAA1024Q9UPX6 916 aa14.56□□□□□ -0.08
HLA-DQA1-201ENST00000343139 DNM3Q9UQ16 869 aa14.56□□□□□ -0.08
HLA-DQA1-201ENST00000343139 GINS2Q9Y248 185 aa14.56□□□□□ -0.08
HLA-DQA1-201ENST00000343139 SRPRBQ9Y5M8 271 aaKnown RBP14.56□□□□□ -0.08
HLA-DQA1-201ENST00000343139 CLIC4Q9Y696 253 aa14.56□□□□□ -0.08
HLA-DQA1-201ENST00000343139 LAMA2P24043 3122 aaKnown RBP14.55□□□□□ -0.08
HLA-DQA1-201ENST00000343139 TET1Q8NFU7 2136 aa14.55□□□□□ -0.08
HLA-DQA1-201ENST00000343139 WDR81Q562E7 1941 aa14.55□□□□□ -0.08
HLA-DQA1-201ENST00000343139 EYA4O95677 639 aa14.55□□□□□ -0.08
HLA-DQA1-201ENST00000343139 CYP11B2P19099 503 aa14.55□□□□□ -0.08
HLA-DQA1-201ENST00000343139 ARL2P36404 184 aa14.55□□□□□ -0.08
HLA-DQA1-201ENST00000343139 DEFB103AP81534 67 aa14.55□□□□□ -0.08
HLA-DQA1-201ENST00000343139 FAM228AQ86W67 206 aa14.55□□□□□ -0.08
HLA-DQA1-201ENST00000343139 IFNLR1Q8IU57 520 aaPredicted RBP14.55□□□□□ -0.08
HLA-DQA1-201ENST00000343139 RHPN2Q8IUC4 686 aa14.55□□□□□ -0.08
HLA-DQA1-201ENST00000343139 TIFAQ96CG3 184 aa14.55□□□□□ -0.08
HLA-DQA1-201ENST00000343139 USP28Q96RU2 1077 aa14.55□□□□□ -0.08
HLA-DQA1-201ENST00000343139 RAD9AQ99638 391 aa14.55□□□□□ -0.08
HLA-DQA1-201ENST00000343139 IFT122Q9HBG6 1241 aa14.55□□□□□ -0.08
HLA-DQA1-201ENST00000343139 C1orf112Q9NSG2 853 aa14.55□□□□□ -0.08
HLA-DQA1-201ENST00000343139 DDX19AQ9NUU7 478 aaKnown RBP14.55□□□□□ -0.08
HLA-DQA1-201ENST00000343139 SZT2Q5T011 3432 aa14.54□□□□□ -0.08
HLA-DQA1-201ENST00000343139 ARHGEF35A5YM69 484 aa14.54□□□□□ -0.08
HLA-DQA1-201ENST00000343139 PP2D1A8MPX8 630 aa14.54□□□□□ -0.08
HLA-DQA1-201ENST00000343139 GRXCR1A8MXD5 290 aa14.54□□□□□ -0.08
HLA-DQA1-201ENST00000343139 SFPQP23246 707 aaKnown RBP eCLIP14.54□□□□□ -0.08
HLA-DQA1-201ENST00000343139 HTRA4P83105 476 aaPredicted RBP14.54□□□□□ -0.08
HLA-DQA1-201ENST00000343139 LAMTOR4Q0VGL1 99 aa14.54□□□□□ -0.08
HLA-DQA1-201ENST00000343139 FAM173BQ6P4H8 233 aa14.54□□□□□ -0.08
HLA-DQA1-201ENST00000343139 PADI6Q6TGC4 694 aa14.54□□□□□ -0.08
HLA-DQA1-201ENST00000343139 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.54□□□□□ -0.08
HLA-DQA1-201ENST00000343139 SRGAP1Q7Z6B7 1085 aa14.54□□□□□ -0.08
HLA-DQA1-201ENST00000343139 CRIPAKQ8N1N5 446 aa14.54□□□□□ -0.08
HLA-DQA1-201ENST00000343139 TMEM143Q96AN5 459 aa14.54□□□□□ -0.08
HLA-DQA1-201ENST00000343139 TMX1Q9H3N1 280 aa14.54□□□□□ -0.08
HLA-DQA1-201ENST00000343139 CHST12Q9NRB3 414 aa14.54□□□□□ -0.08
HLA-DQA1-201ENST00000343139 RGS18Q9NS28 235 aa14.54□□□□□ -0.08
HLA-DQA1-201ENST00000343139 DAXXQ9UER7 740 aaPredicted RBP14.54□□□□□ -0.08
HLA-DQA1-201ENST00000343139 FBXO2Q9UK22 296 aaPredicted RBP14.54□□□□□ -0.08
HLA-DQA1-201ENST00000343139 INSL6Q9Y581 213 aa14.54□□□□□ -0.08
HLA-DQA1-201ENST00000343139 A0A087WZ62 844 aa14.53□□□□□ -0.08
HLA-DQA1-201ENST00000343139 PPP6R2O75170 966 aa14.53□□□□□ -0.08
HLA-DQA1-201ENST00000343139 YEATS4O95619 227 aa14.53□□□□□ -0.08
HLA-DQA1-201ENST00000343139 BRD1O95696 1058 aa14.53□□□□□ -0.08
HLA-DQA1-201ENST00000343139 CDC25AP30304 524 aa14.53□□□□□ -0.08
HLA-DQA1-201ENST00000343139 UBA7P41226 1012 aa14.53□□□□□ -0.08
HLA-DQA1-201ENST00000343139 NFX1Q12986 1120 aaKnown RBP14.53□□□□□ -0.08
HLA-DQA1-201ENST00000343139 TFDP1Q14186 410 aa14.53□□□□□ -0.08
HLA-DQA1-201ENST00000343139 DSC3Q14574 896 aa14.53□□□□□ -0.08
HLA-DQA1-201ENST00000343139 TMEM119Q4V9L6 283 aa14.53□□□□□ -0.08
HLA-DQA1-201ENST00000343139 ZNF697Q5TEC3 545 aa14.53□□□□□ -0.08
HLA-DQA1-201ENST00000343139 MYOCDQ8IZQ8 938 aa14.53□□□□□ -0.08
HLA-DQA1-201ENST00000343139 LINC00301Q8NCQ3 95 aa14.53□□□□□ -0.08
HLA-DQA1-201ENST00000343139 SCLT1Q96NL6 688 aa14.53□□□□□ -0.08
HLA-DQA1-201ENST00000343139 FDXACB1Q9BRP7 624 aaPredicted RBP14.53□□□□□ -0.08
HLA-DQA1-201ENST00000343139 TIPINQ9BVW5 301 aa14.53□□□□□ -0.08
HLA-DQA1-201ENST00000343139 TRAIPQ9BWF2 469 aa14.53□□□□□ -0.08
HLA-DQA1-201ENST00000343139 CCSER1Q9C0I3 900 aa14.53□□□□□ -0.08
HLA-DQA1-201ENST00000343139 BHMT2Q9H2M3 363 aa14.53□□□□□ -0.08
HLA-DQA1-201ENST00000343139 KCND2Q9NZV8 630 aa14.53□□□□□ -0.08
HLA-DQA1-201ENST00000343139 TLL1O43897 1013 aa14.52□□□□□ -0.08
HLA-DQA1-201ENST00000343139 USO1O60763 962 aaKnown RBP14.52□□□□□ -0.08
HLA-DQA1-201ENST00000343139 PBX2P40425 430 aa14.52□□□□□ -0.08
HLA-DQA1-201ENST00000343139 FAM189BP81408 668 aa14.52□□□□□ -0.08
HLA-DQA1-201ENST00000343139 GRB10Q13322 594 aa14.52□□□□□ -0.08
HLA-DQA1-201ENST00000343139 SLC24A5Q71RS6 500 aa14.52□□□□□ -0.08
HLA-DQA1-201ENST00000343139 RTN4RL1Q86UN2 441 aaPredicted RBP14.52□□□□□ -0.08
HLA-DQA1-201ENST00000343139 CABP7Q86V35 215 aa14.52□□□□□ -0.08
HLA-DQA1-201ENST00000343139 LINC01599Q8WXQ3 324 aa14.52□□□□□ -0.08
HLA-DQA1-201ENST00000343139 CALML4Q96GE6 196 aa14.52□□□□□ -0.08
HLA-DQA1-201ENST00000343139 NLRP4Q96MN2 994 aa14.52□□□□□ -0.08
HLA-DQA1-201ENST00000343139 PPP1R16BQ96T49 567 aa14.52□□□□□ -0.08
HLA-DQA1-201ENST00000343139 YBX2Q9Y2T7 364 aaKnown RBP14.52□□□□□ -0.08
HLA-DQA1-201ENST00000343139 SIP14410 1827 aa14.52□□□□□ -0.09
HLA-DQA1-201ENST00000343139 COL4A6Q14031 1691 aa14.52□□□□□ -0.09
HLA-DQA1-201ENST00000343139 ZSCAN20P17040 1043 aaPredicted RBP14.51□□□□□ -0.09
HLA-DQA1-201ENST00000343139 GLRA2P23416 452 aa14.51□□□□□ -0.09
HLA-DQA1-201ENST00000343139 PHKA2P46019 1235 aa14.51□□□□□ -0.09
HLA-DQA1-201ENST00000343139 SARSP49591 514 aaKnown RBP14.51□□□□□ -0.09
HLA-DQA1-201ENST00000343139 RABGGTBP53611 331 aa14.51□□□□□ -0.09
HLA-DQA1-201ENST00000343139 PTENP60484 403 aa14.51□□□□□ -0.09
HLA-DQA1-201ENST00000343139 PKP1Q13835 747 aa14.51□□□□□ -0.09
HLA-DQA1-201ENST00000343139 NPAS4Q8IUM7 802 aa14.51□□□□□ -0.09
HLA-DQA1-201ENST00000343139 KSR1Q8IVT5 923 aa14.51□□□□□ -0.09
HLA-DQA1-201ENST00000343139 SYT2Q8N9I0 419 aaPredicted RBP14.51□□□□□ -0.09
HLA-DQA1-201ENST00000343139 KRI1Q8N9T8 703 aaKnown RBP14.51□□□□□ -0.09
HLA-DQA1-201ENST00000343139 RNF149Q8NC42 400 aa14.51□□□□□ -0.09
HLA-DQA1-201ENST00000343139 SPRYD3Q8NCJ5 442 aa14.51□□□□□ -0.09
HLA-DQA1-201ENST00000343139 SP7Q8TDD2 431 aaPredicted RBP14.51□□□□□ -0.09
HLA-DQA1-201ENST00000343139 KIFAP3Q92845 792 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms