RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 DCAF4Q8WV16 495 aa8.66□□□□□ -1.02
UBE4B-202ENST00000343090 FAM149B1Q96BN6 582 aa8.66□□□□□ -1.02
UBE4B-202ENST00000343090 TRIM11Q96F44 468 aa8.66□□□□□ -1.02
UBE4B-202ENST00000343090 CAPN11Q9UMQ6 739 aa8.66□□□□□ -1.02
UBE4B-202ENST00000343090 PXDNLA1KZ92 1463 aa8.66□□□□□ -1.02
UBE4B-202ENST00000343090 DLC1Q96QB1 1528 aa8.66□□□□□ -1.02
UBE4B-202ENST00000343090 GIPC1O14908 333 aa8.66□□□□□ -1.02
UBE4B-202ENST00000343090 SSTR3P32745 418 aaPredicted RBP8.66□□□□□ -1.02
UBE4B-202ENST00000343090 Q3C1V9 767 aa8.66□□□□□ -1.02
UBE4B-202ENST00000343090 BBS9Q3SYG4 887 aa8.66□□□□□ -1.02
UBE4B-202ENST00000343090 PDXDC2PQ6P474 469 aa8.66□□□□□ -1.02
UBE4B-202ENST00000343090 PADI6Q6TGC4 694 aa8.66□□□□□ -1.02
UBE4B-202ENST00000343090 SCYL3Q8IZE3 742 aa8.66□□□□□ -1.02
UBE4B-202ENST00000343090 RAVER2Q9HCJ3 691 aaKnown RBP8.66□□□□□ -1.02
UBE4B-202ENST00000343090 TUBE1Q9UJT0 475 aa8.66□□□□□ -1.02
UBE4B-202ENST00000343090 ANAPC7Q9UJX3 599 aa8.66□□□□□ -1.02
UBE4B-202ENST00000343090 PDHBP11177 359 aa8.66□□□□□ -1.02
UBE4B-202ENST00000343090 MSH2P43246 934 aa8.66□□□□□ -1.02
UBE4B-202ENST00000343090 PDE1BQ01064 536 aa8.66□□□□□ -1.02
UBE4B-202ENST00000343090 DRAP1Q14919 205 aaPredicted RBP8.66□□□□□ -1.02
UBE4B-202ENST00000343090 NR1I3Q14994 352 aa8.66□□□□□ -1.02
UBE4B-202ENST00000343090 PDCD2Q16342 344 aaPredicted RBP8.66□□□□□ -1.02
UBE4B-202ENST00000343090 SWT1Q5T5J6 900 aaKnown RBP8.66□□□□□ -1.02
UBE4B-202ENST00000343090 DARS2Q6PI48 645 aaKnown RBP8.66□□□□□ -1.02
UBE4B-202ENST00000343090 RNF207Q6ZRF8 634 aa8.66□□□□□ -1.02
UBE4B-202ENST00000343090 AFAP1L2Q8N4X5 818 aa8.66□□□□□ -1.02
UBE4B-202ENST00000343090 KCTD6Q8NC69 237 aa8.66□□□□□ -1.02
UBE4B-202ENST00000343090 MTA3Q9BTC8 594 aa8.66□□□□□ -1.02
UBE4B-202ENST00000343090 LRRC1Q9BTT6 524 aa8.66□□□□□ -1.02
UBE4B-202ENST00000343090 EVI5O60447 810 aa8.65□□□□□ -1.02
UBE4B-202ENST00000343090 CSF1RP07333 972 aa8.65□□□□□ -1.02
UBE4B-202ENST00000343090 ACTN1P12814 892 aa8.65□□□□□ -1.02
UBE4B-202ENST00000343090 PRELPP51888 382 aa8.65□□□□□ -1.02
UBE4B-202ENST00000343090 PDE1CQ14123 709 aaPredicted RBP8.65□□□□□ -1.02
UBE4B-202ENST00000343090 HP1BP3Q5SSJ5 553 aaPredicted RBP8.65□□□□□ -1.02
UBE4B-202ENST00000343090 ZNF449Q6P9G9 518 aa8.65□□□□□ -1.02
UBE4B-202ENST00000343090 GLYCTKQ8IVS8 523 aa8.65□□□□□ -1.02
UBE4B-202ENST00000343090 DCLK2Q8N568 766 aa8.65□□□□□ -1.02
UBE4B-202ENST00000343090 SLC17A8Q8NDX2 589 aa8.65□□□□□ -1.02
UBE4B-202ENST00000343090 ENGASEQ8NFI3 743 aa8.65□□□□□ -1.02
UBE4B-202ENST00000343090 NSMCE1Q8WV22 266 aa8.65□□□□□ -1.02
UBE4B-202ENST00000343090 CFAP36Q96G28 342 aa8.65□□□□□ -1.02
UBE4B-202ENST00000343090 MSTO1Q9BUK6 570 aa8.65□□□□□ -1.02
UBE4B-202ENST00000343090 PLA2G12BQ9BX93 195 aa8.65□□□□□ -1.02
UBE4B-202ENST00000343090 SPZ1Q9BXG8 430 aa8.65□□□□□ -1.02
UBE4B-202ENST00000343090 TRIM9Q9C026 710 aa8.65□□□□□ -1.02
UBE4B-202ENST00000343090 ADD3Q9UEY8 706 aaKnown RBP8.65□□□□□ -1.02
UBE4B-202ENST00000343090 CNOT8Q9UFF9 292 aaKnown RBP8.65□□□□□ -1.02
UBE4B-202ENST00000343090 LIMA1Q9UHB6 759 aaKnown RBP8.65□□□□□ -1.02
UBE4B-202ENST00000343090 G3BP2Q9UN86 482 aaKnown RBP8.65□□□□□ -1.02
UBE4B-202ENST00000343090 IQGAP1P46940 1657 aa8.65□□□□□ -1.02
UBE4B-202ENST00000343090 CLTCQ00610 1675 aaKnown RBP8.65□□□□□ -1.02
UBE4B-202ENST00000343090 MMEP08473 750 aa8.65□□□□□ -1.02
UBE4B-202ENST00000343090 PLS3P13797 630 aa8.65□□□□□ -1.02
UBE4B-202ENST00000343090 MAGOHP61326 146 aaKnown RBP8.65□□□□□ -1.02
UBE4B-202ENST00000343090 COG7P83436 770 aa8.65□□□□□ -1.02
UBE4B-202ENST00000343090 STK4Q13043 487 aa8.65□□□□□ -1.02
UBE4B-202ENST00000343090 DYNC1I2Q13409 638 aaKnown RBP8.65□□□□□ -1.02
UBE4B-202ENST00000343090 KCTD2Q14681 263 aa8.65□□□□□ -1.02
UBE4B-202ENST00000343090 CDO1Q16878 200 aa8.65□□□□□ -1.02
UBE4B-202ENST00000343090 NUGGCQ68CJ6 796 aa8.65□□□□□ -1.02
UBE4B-202ENST00000343090 TRIM65Q6PJ69 517 aa8.65□□□□□ -1.02
UBE4B-202ENST00000343090 KRT27Q7Z3Y8 459 aa8.65□□□□□ -1.02
UBE4B-202ENST00000343090 MAP7D3Q8IWC1 876 aa8.65□□□□□ -1.02
UBE4B-202ENST00000343090 CCDC117Q8IWD4 279 aaPredicted RBP8.65□□□□□ -1.02
UBE4B-202ENST00000343090 GUF1Q8N442 669 aaKnown RBP8.65□□□□□ -1.02
UBE4B-202ENST00000343090 CCNYQ8ND76 341 aa8.65□□□□□ -1.02
UBE4B-202ENST00000343090 SH2D3AQ9BRG2 576 aa8.65□□□□□ -1.02
UBE4B-202ENST00000343090 MRPL47Q9HD33 250 aaKnown RBP8.65□□□□□ -1.02
UBE4B-202ENST00000343090 CEP170BQ9Y4F5 1589 aaPredicted RBP8.65□□□□□ -1.02
UBE4B-202ENST00000343090 F5H6K3 240 aa8.65□□□□□ -1.02
UBE4B-202ENST00000343090 H0Y3Z8 333 aa8.65□□□□□ -1.02
UBE4B-202ENST00000343090 SH3BP5O60239 455 aa8.65□□□□□ -1.02
UBE4B-202ENST00000343090 KLRC3Q07444 240 aa8.65□□□□□ -1.02
UBE4B-202ENST00000343090 MTMR1Q13613 665 aa8.65□□□□□ -1.02
UBE4B-202ENST00000343090 OR6B2Q6IFH4 312 aa8.65□□□□□ -1.02
UBE4B-202ENST00000343090 PDXDC1Q6P996 788 aa8.65□□□□□ -1.02
UBE4B-202ENST00000343090 ARHGEF18Q6ZSZ5 1173 aa8.65□□□□□ -1.02
UBE4B-202ENST00000343090 RHOT2Q8IXI1 618 aa8.65□□□□□ -1.02
UBE4B-202ENST00000343090 MIEF2Q96C03 454 aa8.65□□□□□ -1.02
UBE4B-202ENST00000343090 AFG3L2Q9Y4W6 797 aa8.65□□□□□ -1.02
UBE4B-202ENST00000343090 ABCA9Q8IUA7 1624 aa8.65□□□□□ -1.03
UBE4B-202ENST00000343090 MCF2LO15068 1137 aa8.65□□□□□ -1.03
UBE4B-202ENST00000343090 PSAPP07602 524 aa8.65□□□□□ -1.03
UBE4B-202ENST00000343090 HSPA6P17066 643 aa8.65□□□□□ -1.03
UBE4B-202ENST00000343090 PPP2R2AP63151 447 aa8.65□□□□□ -1.03
UBE4B-202ENST00000343090 IRX4P78413 519 aa8.65□□□□□ -1.03
UBE4B-202ENST00000343090 TMED1Q13445 227 aa8.65□□□□□ -1.03
UBE4B-202ENST00000343090 TFDP1Q14186 410 aa8.65□□□□□ -1.03
UBE4B-202ENST00000343090 SULF1Q8IWU6 871 aa8.65□□□□□ -1.03
UBE4B-202ENST00000343090 HSPH1Q92598 858 aa8.65□□□□□ -1.03
UBE4B-202ENST00000343090 NLRP4Q96MN2 994 aa8.65□□□□□ -1.03
UBE4B-202ENST00000343090 VCPKMTQ9H867 229 aa8.65□□□□□ -1.03
UBE4B-202ENST00000343090 RGL1Q9NZL6 768 aa8.65□□□□□ -1.03
UBE4B-202ENST00000343090 A0A1W2PQC6 194 aa8.64□□□□□ -1.03
UBE4B-202ENST00000343090 GOLGA8MH3BSY2 632 aa8.64□□□□□ -1.03
UBE4B-202ENST00000343090 CCDC188H7C350 402 aa8.64□□□□□ -1.03
UBE4B-202ENST00000343090 K7ERI5 159 aa8.64□□□□□ -1.03
UBE4B-202ENST00000343090 TLR3O15455 904 aaKnown RBP8.64□□□□□ -1.03
UBE4B-202ENST00000343090 SKIP12755 728 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms