RNA–Protein interactions for RNA: ENST00000342310.7

LMX1A-202, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,545 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-202ENST00000342310 MYH14Q7Z406 1995 aaKnown RBP13.59□□□□□ -0.23
LMX1A-202ENST00000342310 PHRF1Q9P1Y6 1649 aaKnown RBP13.59□□□□□ -0.23
LMX1A-202ENST00000342310 N4BP2Q86UW6 1770 aaPredicted RBP13.59□□□□□ -0.23
LMX1A-202ENST00000342310 A0A1W2PQJ5 194 aa13.59□□□□□ -0.23
LMX1A-202ENST00000342310 MEIS2O14770 477 aa13.59□□□□□ -0.23
LMX1A-202ENST00000342310 EIF3HO15372 352 aaKnown RBP eCLIP13.59□□□□□ -0.23
LMX1A-202ENST00000342310 CYP26A1O43174 497 aa13.59□□□□□ -0.23
LMX1A-202ENST00000342310 IFNB1P01574 187 aa13.59□□□□□ -0.23
LMX1A-202ENST00000342310 HSD17B3P37058 310 aa13.59□□□□□ -0.23
LMX1A-202ENST00000342310 SYCP2LQ5T4T6 812 aa13.59□□□□□ -0.23
LMX1A-202ENST00000342310 CYP4F22Q6NT55 531 aa13.59□□□□□ -0.23
LMX1A-202ENST00000342310 CYFIP1Q7L576 1253 aa13.59□□□□□ -0.23
LMX1A-202ENST00000342310 CCDC17Q96LX7 622 aa13.59□□□□□ -0.23
LMX1A-202ENST00000342310 FMO2Q99518 471 aa13.59□□□□□ -0.23
LMX1A-202ENST00000342310 TAF1DQ9H5J8 278 aaPredicted RBP13.59□□□□□ -0.23
LMX1A-202ENST00000342310 BAIAP2L1Q9UHR4 511 aa13.59□□□□□ -0.23
LMX1A-202ENST00000342310 TSKSQ9UJT2 592 aa13.59□□□□□ -0.23
LMX1A-202ENST00000342310 GJA3Q9Y6H8 435 aa13.59□□□□□ -0.23
LMX1A-202ENST00000342310 ZNF142P52746 1687 aaPredicted RBP13.59□□□□□ -0.23
LMX1A-202ENST00000342310 SSU72P8A0A1W2PR75 194 aa13.59□□□□□ -0.23
LMX1A-202ENST00000342310 IPO5O00410 1097 aaKnown RBP13.59□□□□□ -0.23
LMX1A-202ENST00000342310 HIP1RO75146 1068 aa13.59□□□□□ -0.23
LMX1A-202ENST00000342310 MARCKSL1P49006 195 aa13.59□□□□□ -0.23
LMX1A-202ENST00000342310 PPP4R3AQ6IN85 833 aa13.59□□□□□ -0.23
LMX1A-202ENST00000342310 BARGINQ6ZT62 677 aa13.59□□□□□ -0.23
LMX1A-202ENST00000342310 ARHGEF26Q96DR7 871 aa13.59□□□□□ -0.23
LMX1A-202ENST00000342310 DNAJC18Q9H819 358 aa13.59□□□□□ -0.23
LMX1A-202ENST00000342310 DBR1Q9UK59 544 aaKnown RBP13.59□□□□□ -0.23
LMX1A-202ENST00000342310 CICQ96RK0 1608 aaPredicted RBP13.58□□□□□ -0.24
LMX1A-202ENST00000342310 TNNI1P19237 187 aa13.58□□□□□ -0.24
LMX1A-202ENST00000342310 DR1Q01658 176 aa13.58□□□□□ -0.24
LMX1A-202ENST00000342310 SEZ6Q53EL9 994 aa13.58□□□□□ -0.24
LMX1A-202ENST00000342310 STXBP4Q6ZWJ1 553 aa13.58□□□□□ -0.24
LMX1A-202ENST00000342310 RPUSD2Q8IZ73 545 aaKnown RBP13.58□□□□□ -0.24
LMX1A-202ENST00000342310 ZNF653Q96CK0 615 aa13.58□□□□□ -0.24
LMX1A-202ENST00000342310 CEP63Q96MT8 703 aa13.58□□□□□ -0.24
LMX1A-202ENST00000342310 CCT8L2Q96SF2 557 aa13.58□□□□□ -0.24
LMX1A-202ENST00000342310 TACO1Q9BSH4 297 aaKnown RBP13.58□□□□□ -0.24
LMX1A-202ENST00000342310 NID2Q14112 1375 aa13.58□□□□□ -0.24
LMX1A-202ENST00000342310 DDX3XO00571 662 aaKnown RBP eCLIP13.58□□□□□ -0.24
LMX1A-202ENST00000342310 RGS16O15492 202 aaPredicted RBP13.58□□□□□ -0.24
LMX1A-202ENST00000342310 MAP2K2P36507 400 aa13.58□□□□□ -0.24
LMX1A-202ENST00000342310 JAG1P78504 1218 aa13.58□□□□□ -0.24
LMX1A-202ENST00000342310 RC3H1Q5TC82 1133 aaKnown RBP13.58□□□□□ -0.24
LMX1A-202ENST00000342310 LLGL2Q6P1M3 1020 aa13.58□□□□□ -0.24
LMX1A-202ENST00000342310 PADI6Q6TGC4 694 aa13.58□□□□□ -0.24
LMX1A-202ENST00000342310 DHX38Q92620 1227 aaKnown RBP13.58□□□□□ -0.24
LMX1A-202ENST00000342310 C18orf8Q96DM3 657 aa13.58□□□□□ -0.24
LMX1A-202ENST00000342310 ZNF341Q9BYN7 854 aa13.58□□□□□ -0.24
LMX1A-202ENST00000342310 TOPORSQ9NS56 1045 aaPredicted RBP13.58□□□□□ -0.24
LMX1A-202ENST00000342310 TYW1Q9NV66 732 aaKnown RBP13.58□□□□□ -0.24
LMX1A-202ENST00000342310 COL18A1P39060 1754 aa13.58□□□□□ -0.24
LMX1A-202ENST00000342310 CLTAP09496 248 aa13.57□□□□□ -0.24
LMX1A-202ENST00000342310 DENND2CQ68D51 928 aa13.57□□□□□ -0.24
LMX1A-202ENST00000342310 RNF10Q8N5U6 811 aaKnown RBP13.57□□□□□ -0.24
LMX1A-202ENST00000342310 PPP1R16BQ96T49 567 aa13.57□□□□□ -0.24
LMX1A-202ENST00000342310 NEUROG2Q9H2A3 272 aa13.57□□□□□ -0.24
LMX1A-202ENST00000342310 CD248Q9HCU0 757 aa13.57□□□□□ -0.24
LMX1A-202ENST00000342310 ANKFY1Q9P2R3 1169 aa13.57□□□□□ -0.24
LMX1A-202ENST00000342310 STK38LQ9Y2H1 464 aa13.57□□□□□ -0.24
LMX1A-202ENST00000342310 MYH15Q9Y2K3 1946 aa13.57□□□□□ -0.24
LMX1A-202ENST00000342310 MYH7P12883 1935 aa13.57□□□□□ -0.24
LMX1A-202ENST00000342310 IL1R1P14778 569 aa13.57□□□□□ -0.24
LMX1A-202ENST00000342310 ALDH1B1P30837 517 aa13.57□□□□□ -0.24
LMX1A-202ENST00000342310 SEL1L2Q5TEA6 688 aa13.57□□□□□ -0.24
LMX1A-202ENST00000342310 TCP11Q8WWU5 503 aa13.57□□□□□ -0.24
LMX1A-202ENST00000342310 ATG4AQ8WYN0 398 aa13.57□□□□□ -0.24
LMX1A-202ENST00000342310 POMGNT1Q8WZA1 660 aa13.57□□□□□ -0.24
LMX1A-202ENST00000342310 SLC35C1Q96A29 364 aa13.57□□□□□ -0.24
LMX1A-202ENST00000342310 DUOX1Q9NRD9 1551 aa13.57□□□□□ -0.24
LMX1A-202ENST00000342310 PIAS1O75925 651 aa13.57□□□□□ -0.24
LMX1A-202ENST00000342310 RPA1P27694 616 aa13.57□□□□□ -0.24
LMX1A-202ENST00000342310 CALCOCO2Q13137 446 aa13.57□□□□□ -0.24
LMX1A-202ENST00000342310 TMEM119Q4V9L6 283 aa13.57□□□□□ -0.24
LMX1A-202ENST00000342310 TMEM179Q6ZVK1 233 aa13.57□□□□□ -0.24
LMX1A-202ENST00000342310 TPCN2Q8NHX9 752 aa13.57□□□□□ -0.24
LMX1A-202ENST00000342310 ATP6V1G3Q96LB4 118 aa13.57□□□□□ -0.24
LMX1A-202ENST00000342310 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.57□□□□□ -0.24
LMX1A-202ENST00000342310 WDR11Q9BZH6 1224 aa13.57□□□□□ -0.24
LMX1A-202ENST00000342310 UBXN6Q9BZV1 441 aa13.57□□□□□ -0.24
LMX1A-202ENST00000342310 INTS2Q9H0H0 1204 aaKnown RBP13.57□□□□□ -0.24
LMX1A-202ENST00000342310 METTL14Q9HCE5 456 aaKnown RBP13.57□□□□□ -0.24
LMX1A-202ENST00000342310 LARSQ9P2J5 1176 aaKnown RBP13.57□□□□□ -0.24
LMX1A-202ENST00000342310 A0A087WUV0 522 aaPredicted RBP13.56□□□□□ -0.24
LMX1A-202ENST00000342310 EDIL3O43854 480 aa13.56□□□□□ -0.24
LMX1A-202ENST00000342310 FMO5P49326 533 aa13.56□□□□□ -0.24
LMX1A-202ENST00000342310 EFCAB13Q8IY85 973 aa13.56□□□□□ -0.24
LMX1A-202ENST00000342310 KRT35Q92764 455 aa13.56□□□□□ -0.24
LMX1A-202ENST00000342310 TTC7AQ9ULT0 858 aaPredicted RBP13.56□□□□□ -0.24
LMX1A-202ENST00000342310 ESYT2A0FGR8 921 aa13.56□□□□□ -0.24
LMX1A-202ENST00000342310 HNRNPDLO14979 420 aaKnown RBP13.56□□□□□ -0.24
LMX1A-202ENST00000342310 PPP1R37O75864 691 aa13.56□□□□□ -0.24
LMX1A-202ENST00000342310 SPATA31C1P0DKV0 1188 aa13.56□□□□□ -0.24
LMX1A-202ENST00000342310 BCRP11274 1271 aa13.56□□□□□ -0.24
LMX1A-202ENST00000342310 ATF7P17544 494 aaPredicted RBP13.56□□□□□ -0.24
LMX1A-202ENST00000342310 ERFP50548 548 aa13.56□□□□□ -0.24
LMX1A-202ENST00000342310 SLC12A3P55017 1021 aa13.56□□□□□ -0.24
LMX1A-202ENST00000342310 OSTNP61366 133 aa13.56□□□□□ -0.24
LMX1A-202ENST00000342310 VPS72Q15906 364 aa13.56□□□□□ -0.24
LMX1A-202ENST00000342310 MEI1Q5TIA1 1274 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms