RNA–Protein interactions for RNA: ENST00000341567.8

TMEM248-201, Transcript of transmembrane protein 248, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM248, Length 4,229 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-201ENST00000341567 MCUR1Q96AQ8 359 aa14.59□□□□□ -0.07
TMEM248-201ENST00000341567 FAM49AQ9H0Q0 323 aaPredicted RBP14.59□□□□□ -0.07
TMEM248-201ENST00000341567 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.59□□□□□ -0.07
TMEM248-201ENST00000341567 ATP5DP30049 168 aa14.58□□□□□ -0.07
TMEM248-201ENST00000341567 ANGEL2Q5VTE6 544 aaKnown RBP14.58□□□□□ -0.07
TMEM248-201ENST00000341567 CCNI2Q6ZMN8 369 aaPredicted RBP14.58□□□□□ -0.07
TMEM248-201ENST00000341567 GLYCTKQ8IVS8 523 aa14.58□□□□□ -0.07
TMEM248-201ENST00000341567 NUDT12Q9BQG2 462 aa14.58□□□□□ -0.07
TMEM248-201ENST00000341567 VPS37BQ9H9H4 285 aa14.58□□□□□ -0.07
TMEM248-201ENST00000341567 PLCB1Q9NQ66 1216 aa14.58□□□□□ -0.07
TMEM248-201ENST00000341567 HPCAL4Q9UM19 191 aa14.58□□□□□ -0.07
TMEM248-201ENST00000341567 ADCY8P40145 1251 aa14.58□□□□□ -0.08
TMEM248-201ENST00000341567 MAGOHP61326 146 aaKnown RBP14.58□□□□□ -0.08
TMEM248-201ENST00000341567 PLA2G4FQ68DD2 849 aa14.58□□□□□ -0.08
TMEM248-201ENST00000341567 FAM20AQ96MK3 541 aa14.58□□□□□ -0.08
TMEM248-201ENST00000341567 FAM213AQ9BRX8 229 aa14.58□□□□□ -0.08
TMEM248-201ENST00000341567 RNF181Q9P0P0 153 aa14.58□□□□□ -0.08
TMEM248-201ENST00000341567 SNX24Q9Y343 169 aa14.58□□□□□ -0.08
TMEM248-201ENST00000341567 ANO9A1A5B4 782 aa14.58□□□□□ -0.08
TMEM248-201ENST00000341567 DENND3A2RUS2 1198 aa14.58□□□□□ -0.08
TMEM248-201ENST00000341567 POLRMTO00411 1230 aaKnown RBP14.58□□□□□ -0.08
TMEM248-201ENST00000341567 NSFP46459 744 aaKnown RBP14.58□□□□□ -0.08
TMEM248-201ENST00000341567 LMNTD2Q8IXW0 634 aa14.58□□□□□ -0.08
TMEM248-201ENST00000341567 SLC24A3Q9HC58 644 aa14.58□□□□□ -0.08
TMEM248-201ENST00000341567 SALL1Q9NSC2 1324 aa14.58□□□□□ -0.08
TMEM248-201ENST00000341567 PIK3C2AO00443 1686 aa14.58□□□□□ -0.08
TMEM248-201ENST00000341567 FGGP02679 453 aa14.58□□□□□ -0.08
TMEM248-201ENST00000341567 SLC9A1P19634 815 aa14.58□□□□□ -0.08
TMEM248-201ENST00000341567 PMS1P54277 932 aaKnown RBP14.58□□□□□ -0.08
TMEM248-201ENST00000341567 CYP4F22Q6NT55 531 aa14.58□□□□□ -0.08
TMEM248-201ENST00000341567 RSBN1LQ6PCB5 846 aaPredicted RBP14.58□□□□□ -0.08
TMEM248-201ENST00000341567 OR2W6PQ8NHA6 318 aa14.58□□□□□ -0.08
TMEM248-201ENST00000341567 FMO2Q99518 471 aa14.58□□□□□ -0.08
TMEM248-201ENST00000341567 NRBP2Q9NSY0 501 aa14.58□□□□□ -0.08
TMEM248-201ENST00000341567 THAP12O43422 761 aa14.57□□□□□ -0.08
TMEM248-201ENST00000341567 SERPING1P05155 500 aa14.57□□□□□ -0.08
TMEM248-201ENST00000341567 MUM1L1Q5H9M0 696 aa14.57□□□□□ -0.08
TMEM248-201ENST00000341567 VPS52Q8N1B4 723 aa14.57□□□□□ -0.08
TMEM248-201ENST00000341567 LIMA1Q9UHB6 759 aaKnown RBP14.57□□□□□ -0.08
TMEM248-201ENST00000341567 HERC5Q9UII4 1024 aaKnown RBP14.57□□□□□ -0.08
TMEM248-201ENST00000341567 SNX12Q9UMY4 172 aa14.57□□□□□ -0.08
TMEM248-201ENST00000341567 MYO1FO00160 1098 aa14.57□□□□□ -0.08
TMEM248-201ENST00000341567 FERP16591 822 aa14.57□□□□□ -0.08
TMEM248-201ENST00000341567 SLC8A1P32418 973 aa14.57□□□□□ -0.08
TMEM248-201ENST00000341567 DYNLT1P63172 113 aa14.57□□□□□ -0.08
TMEM248-201ENST00000341567 PTK2Q05397 1052 aa14.57□□□□□ -0.08
TMEM248-201ENST00000341567 C7orf31Q8N865 590 aa14.57□□□□□ -0.08
TMEM248-201ENST00000341567 GDAP1Q8TB36 358 aa14.57□□□□□ -0.08
TMEM248-201ENST00000341567 GGT7Q9UJ14 662 aa14.57□□□□□ -0.08
TMEM248-201ENST00000341567 GAS8O95995 478 aa14.57□□□□□ -0.08
TMEM248-201ENST00000341567 CCND2P30279 289 aa14.57□□□□□ -0.08
TMEM248-201ENST00000341567 WHAMMQ8TF30 809 aa14.57□□□□□ -0.08
TMEM248-201ENST00000341567 KIFC3Q9BVG8 833 aa14.57□□□□□ -0.08
TMEM248-201ENST00000341567 LACRTQ9GZZ8 138 aa14.57□□□□□ -0.08
TMEM248-201ENST00000341567 DEFB129Q9H1M3 183 aa14.57□□□□□ -0.08
TMEM248-201ENST00000341567 CAPN11Q9UMQ6 739 aa14.57□□□□□ -0.08
TMEM248-201ENST00000341567 QARSP47897 775 aaKnown RBP14.56□□□□□ -0.08
TMEM248-201ENST00000341567 GMPSP49915 693 aaPredicted RBP14.56□□□□□ -0.08
TMEM248-201ENST00000341567 USP11P51784 963 aa14.56□□□□□ -0.08
TMEM248-201ENST00000341567 LRRC31Q6UY01 552 aa14.56□□□□□ -0.08
TMEM248-201ENST00000341567 AKT1S1Q96B36 256 aa14.56□□□□□ -0.08
TMEM248-201ENST00000341567 POC1B-GALNT4F8VUJ3 575 aa14.56□□□□□ -0.08
TMEM248-201ENST00000341567 CHUKO15111 745 aa14.56□□□□□ -0.08
TMEM248-201ENST00000341567 RHOBTB3O94955 611 aa14.56□□□□□ -0.08
TMEM248-201ENST00000341567 CARSP49589 748 aaKnown RBP14.56□□□□□ -0.08
TMEM248-201ENST00000341567 GJB7Q6PEY0 223 aa14.56□□□□□ -0.08
TMEM248-201ENST00000341567 CATSPER3Q86XQ3 398 aa14.56□□□□□ -0.08
TMEM248-201ENST00000341567 CCDC13Q8IYE1 715 aa14.56□□□□□ -0.08
TMEM248-201ENST00000341567 CERS5Q8N5B7 392 aa14.56□□□□□ -0.08
TMEM248-201ENST00000341567 NYAP2Q9P242 653 aa14.56□□□□□ -0.08
TMEM248-201ENST00000341567 DMGDHQ9UI17 866 aaKnown RBP14.56□□□□□ -0.08
TMEM248-201ENST00000341567 HMGB1P1B2RPK0 211 aaPredicted RBP14.56□□□□□ -0.08
TMEM248-201ENST00000341567 ACSL3O95573 720 aa14.56□□□□□ -0.08
TMEM248-201ENST00000341567 CCDC38Q502W7 563 aa14.56□□□□□ -0.08
TMEM248-201ENST00000341567 GIMAP8Q8ND71 665 aaPredicted RBP14.56□□□□□ -0.08
TMEM248-201ENST00000341567 FEM1BQ9UK73 627 aa14.56□□□□□ -0.08
TMEM248-201ENST00000341567 HDLBPQ00341 1268 aaKnown RBP14.55□□□□□ -0.08
TMEM248-201ENST00000341567 DRAP1Q14919 205 aaPredicted RBP14.55□□□□□ -0.08
TMEM248-201ENST00000341567 FMNL3Q8IVF7 1028 aa14.55□□□□□ -0.08
TMEM248-201ENST00000341567 RNF34Q969K3 372 aa14.55□□□□□ -0.08
TMEM248-201ENST00000341567 ATG4CQ96DT6 458 aa14.55□□□□□ -0.08
TMEM248-201ENST00000341567 ANKZF1Q9H8Y5 726 aa14.55□□□□□ -0.08
TMEM248-201ENST00000341567 RBM12Q9NTZ6 932 aaKnown RBP14.55□□□□□ -0.08
TMEM248-201ENST00000341567 GGA3Q9NZ52 723 aa14.55□□□□□ -0.08
TMEM248-201ENST00000341567 KIF1AQ12756 1690 aa14.55□□□□□ -0.08
TMEM248-201ENST00000341567 GRB10Q13322 594 aa14.55□□□□□ -0.08
TMEM248-201ENST00000341567 NLRP14Q86W24 1093 aa14.55□□□□□ -0.08
TMEM248-201ENST00000341567 AMIGO3Q86WK7 504 aa14.55□□□□□ -0.08
TMEM248-201ENST00000341567 CDR2LQ86X02 465 aaPredicted RBP14.55□□□□□ -0.08
TMEM248-201ENST00000341567 CDAN1Q8IWY9 1227 aa14.55□□□□□ -0.08
TMEM248-201ENST00000341567 RNF10Q8N5U6 811 aaKnown RBP14.55□□□□□ -0.08
TMEM248-201ENST00000341567 ELMO3Q96BJ8 720 aa14.55□□□□□ -0.08
TMEM248-201ENST00000341567 DNAI2Q9GZS0 605 aa14.55□□□□□ -0.08
TMEM248-201ENST00000341567 AMACRQ9UHK6 382 aa14.55□□□□□ -0.08
TMEM248-201ENST00000341567 SUGT1Q9Y2Z0 365 aa14.55□□□□□ -0.08
TMEM248-201ENST00000341567 NUGGCQ68CJ6 796 aa14.55□□□□□ -0.08
TMEM248-201ENST00000341567 DDX42Q86XP3 938 aaKnown RBP eCLIP14.55□□□□□ -0.082e-6■□□□□ 9.8
TMEM248-201ENST00000341567 HAUS1Q96CS2 278 aa14.55□□□□□ -0.08
TMEM248-201ENST00000341567 VCPKMTQ9H867 229 aa14.55□□□□□ -0.08
TMEM248-201ENST00000341567 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms