RNA–Protein interactions for RNA: ENST00000341316.6

SPG7-202, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best) BASIC

Gene SPG7, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-202ENST00000341316 CBWD5Q5RIA9 395 aa21.95■■□□□ 1.1
SPG7-202ENST00000341316 MEI1Q5TIA1 1274 aa21.95■■□□□ 1.1
SPG7-202ENST00000341316 CCDC181Q5TID7 509 aa21.95■■□□□ 1.1
SPG7-202ENST00000341316 RBM12Q9NTZ6 932 aaKnown RBP21.95■■□□□ 1.1
SPG7-202ENST00000341316 ASTN2O75129 1339 aaPredicted RBP21.94■■□□□ 1.1
SPG7-202ENST00000341316 TRIM49P0CI25 452 aa21.94■■□□□ 1.1
SPG7-202ENST00000341316 TRIM49CP0CI26 452 aa21.94■■□□□ 1.1
SPG7-202ENST00000341316 SPP2Q13103 211 aa21.94■■□□□ 1.1
SPG7-202ENST00000341316 PADI6Q6TGC4 694 aa21.94■■□□□ 1.1
SPG7-202ENST00000341316 SYTL5Q8TDW5 730 aaPredicted RBP21.94■■□□□ 1.1
SPG7-202ENST00000341316 AGO4Q9HCK5 861 aaKnown RBP21.94■■□□□ 1.1
SPG7-202ENST00000341316 NENFQ9UMX5 172 aa21.94■■□□□ 1.1
SPG7-202ENST00000341316 UBIAD1Q9Y5Z9 338 aa21.94■■□□□ 1.1
SPG7-202ENST00000341316 BZW2Q9Y6E2 419 aaKnown RBP21.94■■□□□ 1.1
SPG7-202ENST00000341316 UBE4BO95155 1302 aa21.94■■□□□ 1.1
SPG7-202ENST00000341316 FMO5P49326 533 aa21.94■■□□□ 1.1
SPG7-202ENST00000341316 SH2D3AQ9BRG2 576 aa21.94■■□□□ 1.1
SPG7-202ENST00000341316 MKNK1Q9BUB5 465 aa21.94■■□□□ 1.1
SPG7-202ENST00000341316 KIAA1683Q9H0B3 1180 aa21.94■■□□□ 1.1
SPG7-202ENST00000341316 SLC38A10Q9HBR0 1119 aa21.94■■□□□ 1.1
SPG7-202ENST00000341316 ZHX2Q9Y6X8 837 aa21.94■■□□□ 1.1
SPG7-202ENST00000341316 AGPSO00116 658 aa21.93■■□□□ 1.1
SPG7-202ENST00000341316 HS2ST1Q7LGA3 356 aa21.93■■□□□ 1.1
SPG7-202ENST00000341316 OLIG1Q8TAK6 271 aa21.93■■□□□ 1.1
SPG7-202ENST00000341316 TAAR1Q96RJ0 339 aa21.93■■□□□ 1.1
SPG7-202ENST00000341316 GOLPH3Q9H4A6 298 aa21.93■■□□□ 1.1
SPG7-202ENST00000341316 TSKSQ9UJT2 592 aa21.93■■□□□ 1.1
SPG7-202ENST00000341316 FER1L6Q2WGJ9 1857 aa21.92■■□□□ 1.1
SPG7-202ENST00000341316 GFPT2O94808 682 aa21.92■■□□□ 1.1
SPG7-202ENST00000341316 PAFAH1B1P43034 410 aa21.92■■□□□ 1.1
SPG7-202ENST00000341316 GHRHRQ02643 423 aa21.92■■□□□ 1.1
SPG7-202ENST00000341316 ALKBH5Q6P6C2 394 aaKnown RBP21.92■■□□□ 1.1
SPG7-202ENST00000341316 LPAR1Q92633 364 aa21.92■■□□□ 1.1
SPG7-202ENST00000341316 TMEM150BA6NC51 233 aa21.92■■□□□ 1.1
SPG7-202ENST00000341316 TISP43B9A030 160 aa21.92■■□□□ 1.1
SPG7-202ENST00000341316 P4HBP07237 508 aaKnown RBP21.92■■□□□ 1.1
SPG7-202ENST00000341316 PCNX4Q63HM2 1172 aa21.92■■□□□ 1.1
SPG7-202ENST00000341316 RDH13Q8NBN7 331 aa21.92■■□□□ 1.1
SPG7-202ENST00000341316 NEK9Q8TD19 979 aa21.92■■□□□ 1.1
SPG7-202ENST00000341316 AENQ8WTP8 325 aaKnown RBP21.92■■□□□ 1.1
SPG7-202ENST00000341316 PLEKHA4Q9H4M7 779 aa21.92■■□□□ 1.1
SPG7-202ENST00000341316 PIM2Q9P1W9 311 aa21.92■■□□□ 1.1
SPG7-202ENST00000341316 RSPH14Q9UHP6 348 aa21.92■■□□□ 1.1
SPG7-202ENST00000341316 BTNL10A8MVZ5 291 aa21.91■■□□□ 1.1
SPG7-202ENST00000341316 DDX3XO00571 662 aaKnown RBP eCLIP21.91■■□□□ 1.11e-13■■■□□ 19
SPG7-202ENST00000341316 EIF2AK2P19525 551 aaKnown RBP21.91■■□□□ 1.1
SPG7-202ENST00000341316 C10orf76Q5T2E6 689 aa21.91■■□□□ 1.1
SPG7-202ENST00000341316 CCDC70Q6NSX1 233 aa21.91■■□□□ 1.1
SPG7-202ENST00000341316 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.91■■□□□ 1.1
SPG7-202ENST00000341316 STXBP4Q6ZWJ1 553 aa21.91■■□□□ 1.1
SPG7-202ENST00000341316 NIPA1Q7RTP0 329 aa21.91■■□□□ 1.1
SPG7-202ENST00000341316 MCF2L2Q86YR7 1114 aa21.91■■□□□ 1.1
SPG7-202ENST00000341316 PPP1R12BO60237 982 aaPredicted RBP21.91■■□□□ 1.1
SPG7-202ENST00000341316 FLOT1O75955 427 aa21.91■■□□□ 1.1
SPG7-202ENST00000341316 RPS6P62753 249 aaKnown RBP21.91■■□□□ 1.1
SPG7-202ENST00000341316 MTMR1Q13613 665 aa21.91■■□□□ 1.1
SPG7-202ENST00000341316 MTMR2Q13614 643 aa21.91■■□□□ 1.1
SPG7-202ENST00000341316 CFAP221Q4G0U5 840 aa21.91■■□□□ 1.1
SPG7-202ENST00000341316 FRMD4BQ9Y2L6 1034 aa21.91■■□□□ 1.1
SPG7-202ENST00000341316 SAMM50Q9Y512 469 aa21.91■■□□□ 1.1
SPG7-202ENST00000341316 SRCAPQ6ZRS2 3230 aa21.9■■□□□ 1.1
SPG7-202ENST00000341316 K7ENM7 598 aa21.9■■□□□ 1.1
SPG7-202ENST00000341316 VCAM1P19320 739 aa21.9■■□□□ 1.1
SPG7-202ENST00000341316 RARRES1P49788 294 aa21.9■■□□□ 1.1
SPG7-202ENST00000341316 ZNF280AP59817 542 aaPredicted RBP21.9■■□□□ 1.1
SPG7-202ENST00000341316 UGCGQ16739 394 aa21.9■■□□□ 1.1
SPG7-202ENST00000341316 SYCP3Q8IZU3 236 aa21.9■■□□□ 1.1
SPG7-202ENST00000341316 WNK4Q96J92 1243 aa21.9■■□□□ 1.1
SPG7-202ENST00000341316 INPP4AQ96PE3 977 aaPredicted RBP21.9■■□□□ 1.1
SPG7-202ENST00000341316 GPR88Q9GZN0 384 aa21.9■■□□□ 1.1
SPG7-202ENST00000341316 F8VZ95 297 aa21.9■■□□□ 1.1
SPG7-202ENST00000341316 EVI5O60447 810 aa21.9■■□□□ 1.1
SPG7-202ENST00000341316 SAMD7Q7Z3H4 446 aa21.9■■□□□ 1.1
SPG7-202ENST00000341316 JDP2Q8WYK2 163 aa21.9■■□□□ 1.1
SPG7-202ENST00000341316 TAOK3Q9H2K8 898 aa21.9■■□□□ 1.1
SPG7-202ENST00000341316 DNAJC12Q9UKB3 198 aa21.9■■□□□ 1.1
SPG7-202ENST00000341316 GOLGA6BA6NDN3 693 aa21.89■■□□□ 1.09
SPG7-202ENST00000341316 ATP9AO75110 1047 aa21.89■■□□□ 1.09
SPG7-202ENST00000341316 RNASE9P60153 205 aaKnown RBP21.89■■□□□ 1.09
SPG7-202ENST00000341316 PGM5Q15124 567 aa21.89■■□□□ 1.09
SPG7-202ENST00000341316 PTPROQ16827 1216 aa21.89■■□□□ 1.09
SPG7-202ENST00000341316 SND1Q7KZF4 910 aaKnown RBP eCLIP21.89■■□□□ 1.09
SPG7-202ENST00000341316 LRRC57Q8N9N7 239 aa21.89■■□□□ 1.09
SPG7-202ENST00000341316 LNX1Q8TBB1 728 aaPredicted RBP21.89■■□□□ 1.09
SPG7-202ENST00000341316 PCIF1Q9H4Z3 704 aa21.89■■□□□ 1.09
SPG7-202ENST00000341316 PPP1R9AQ9ULJ8 1098 aa21.89■■□□□ 1.09
SPG7-202ENST00000341316 NFKBIEO00221 500 aa21.89■■□□□ 1.09
SPG7-202ENST00000341316 EXOC3O60645 756 aa21.89■■□□□ 1.09
SPG7-202ENST00000341316 ZBTB7AO95365 584 aa21.89■■□□□ 1.09
SPG7-202ENST00000341316 SOX5P35711 763 aa21.89■■□□□ 1.09
SPG7-202ENST00000341316 DLG4P78352 724 aa21.89■■□□□ 1.09
SPG7-202ENST00000341316 DRAP1Q14919 205 aaPredicted RBP21.89■■□□□ 1.09
SPG7-202ENST00000341316 TRMT1LQ7Z2T5 733 aaKnown RBP21.89■■□□□ 1.09
SPG7-202ENST00000341316 SLC9A9Q8IVB4 645 aa21.89■■□□□ 1.09
SPG7-202ENST00000341316 INTS2Q9H0H0 1204 aaKnown RBP21.89■■□□□ 1.09
SPG7-202ENST00000341316 RPAP3Q9H6T3 665 aaPredicted RBP21.89■■□□□ 1.09
SPG7-202ENST00000341316 CTNND1O60716 968 aaKnown RBP21.88■■□□□ 1.09
SPG7-202ENST00000341316 MYCLP12524 364 aaPredicted RBP21.88■■□□□ 1.09
SPG7-202ENST00000341316 STAT1P42224 750 aa21.88■■□□□ 1.09
SPG7-202ENST00000341316 NOP2P46087 812 aaKnown RBP21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms